Cow genome map

Conread name: rfce09c_d13.y1

Conread position: 14-224
Cow position: chr19:13316544-13316333 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 28, 44

Conread position: 19-213
Cow position: chr19:4329169-4328977 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 74, 15

Conread position: 19-218
Cow position: chr19:7884458-7884660 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 82, 10

Conread position: 29-213
Cow position: chr19:37467173-37466985 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 78

Conread position: 34-218
Cow position: chr19:39781409-39781602 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 14

Conread position: 41-175
Cow position: chr19:53371998-53371860 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 65, 84

Conread position: 42-146
Cow position: chr19:39587622-39587520 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 43-178
Cow position: chr19:15442666-15442795 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 43-206
Cow position: chr19:6079458-6079292 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 43-213
Cow position: chr19:7637337-7637159 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 43-218
Cow position: chr19:3216918-3217096 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 84

Conread position: 43-218
Cow position: chr19:11424410-11424235 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 117, 23

Conread position: 45-158
Cow position: chr19:46918753-46918867 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 45-160
Cow position: chr19:25673616-25673503 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 45-178
Cow position: chr19:6688094-6687962 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 45-200
Cow position: chr19:31825109-31824943 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 45-207
Cow position: chr19:6531793-6531955 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 59

Conread position: 45-211
Cow position: chr19:12747872-12747702 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 45-212
Cow position: chr19:22450027-22449851 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 45-213
Cow position: chr19:2734354-2734526 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 14

Conread position: 45-213
Cow position: chr19:17273826-17273664 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 45-213
Cow position: chr19:25652849-25652684 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 45-213
Cow position: chr19:43441069-43441244 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 45-214
Cow position: chr19:4800646-4800819 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 45-214
Cow position: chr19:6516170-6516344 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 45-214
Cow position: chr19:11442886-11443068 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 45-214
Cow position: chr19:19919558-19919384 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 78

Conread position: 45-214
Cow position: chr19:25526183-25526361 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 45-214
Cow position: chr19:40051487-40051316 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 27

Conread position: 45-214
Cow position: chr19:50682537-50682368 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 125, 56

Conread position: 45-215
Cow position: chr19:53840427-53840594 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 141, 19

Conread position: 45-217
Cow position: chr19:21816867-21817043 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 45-218
Cow position: chr19:729841-729665 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 61, 144

Conread position: 45-218
Cow position: chr19:2221175-2220993 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 14

Conread position: 45-218
Cow position: chr19:10242489-10242661 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 33

Conread position: 45-218
Cow position: chr19:20935657-20935839 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 45-218
Cow position: chr19:47986759-47986941 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 45-218
Cow position: chr19:52750856-52750676 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 45-219
Cow position: chr19:41024127-41024307 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 56, 15

Conread position: 45-227
Cow position: chr19:34425488-34425670 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 115, 56

Conread position: 45-229
Cow position: chr19:7404475-7404283 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 45-229
Cow position: chr19:35540200-35540392 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 112, 60

Conread position: 45-242
Cow position: chr19:40449919-40450123 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 197

Conread position: 45-252
Cow position: chr19:43058440-43058645 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 181, 55

Conread position: 45-254
Cow position: chr19:38340076-38339869 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 50

Conread position: 46-214
Cow position: chr19:51185329-51185500 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 60

Conread position: 46-215
Cow position: chr19:10971190-10971017 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 114, 11

Conread position: 46-215
Cow position: chr19:39361047-39361222 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 88, 41

Conread position: 47-178
Cow position: chr19:47118590-47118459 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 59

Conread position: 47-218
Cow position: chr19:22134239-22134070 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 113, 53

Conread position: 47-218
Cow position: chr19:33237082-33237256 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 110, 54

Conread position: 50-160
Cow position: chr19:6902383-6902273 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 67

Conread position: 53-178
Cow position: chr19:11191704-11191579 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 5

Conread position: 54-212
Cow position: chr19:35322224-35322061 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 55-213
Cow position: chr19:51401099-51400938 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 56-162
Cow position: chr19:10171917-10172026 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 77

Conread position: 56-202
Cow position: chr19:42886867-42887021 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 12

Conread position: 56-213
Cow position: chr19:31536040-31536203 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 56-214
Cow position: chr19:39385124-39384964 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 101, 50

Conread position: 56-215
Cow position: chr19:53243560-53243401 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 56-216
Cow position: chr19:14347927-14348093 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 56-218
Cow position: chr19:22799164-22798995 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 22

Conread position: 56-218
Cow position: chr19:31595214-31595383 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 56-218
Cow position: chr19:32506207-32506035 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 56-218
Cow position: chr19:39254537-39254363 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 56-218
Cow position: chr19:41695751-41695579 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 56-218
Cow position: chr19:47859400-47859234 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 56-251
Cow position: chr19:4503134-4503332 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 23

Conread position: 57-215
Cow position: chr19:39649160-39648998 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 57-218
Cow position: chr19:10676943-10676779 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 52

Conread position: 57-218
Cow position: chr19:34166284-34166449 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 58-180
Cow position: chr19:33116512-33116640 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 58-213
Cow position: chr19:22153935-22153773 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 15

Conread position: 58-214
Cow position: chr19:30886312-30886473 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 35, 138

Conread position: 58-216
Cow position: chr19:30910059-30910225 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 58-218
Cow position: chr19:2224184-2224021 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 89

Conread position: 58-218
Cow position: chr19:42694908-42695077 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 59-213
Cow position: chr19:15092218-15092060 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 59-253
Cow position: chr19:1664276-1664075 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 183

Conread position: 60-218
Cow position: chr19:31846632-31846468 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 62-214
Cow position: chr19:25410923-25410770 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 17

Conread position: 63-211
Cow position: chr19:15438021-15438177 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 63-218
Cow position: chr19:24085855-24086008 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 39

Conread position: 63-246
Cow position: chr19:15863121-15862940 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 35

Conread position: 66-215
Cow position: chr19:54915768-54915614 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 66-218
Cow position: chr19:23304566-23304408 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 66-218
Cow position: chr19:43372968-43373121 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 34

Conread position: 67-198
Cow position: chr19:13267265-13267130 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 68-215
Cow position: chr19:25382760-25382609 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 83-215
Cow position: chr19:24956293-24956163 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 88-218
Cow position: chr19:21176796-21176659 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 0

Show alignments to all cow chromosomes.