Cow genome map

Conread name: rfce09c_d13.y1

Conread position: 13-213
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 29, 17

Conread position: 13-214
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 87

Conread position: 14-229
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 0

Conread position: 15-214
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 66

Conread position: 25-218
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 96

Conread position: 29-156
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 73

Conread position: 43-173
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 43-179
Cow position:
Alignm length: 138
Alignm identity: 112
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 48

Conread position: 43-213
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 105

Conread position: 43-214
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 43-215
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 16

Conread position: 43-218
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 16

Conread position: 43-218
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 44-218
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 36

Conread position: 45-158
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 45-164
Cow position:
Alignm length: 122
Alignm identity: 96
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 45-175
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 45-175
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 33

Conread position: 45-189
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 45-196
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 45-209
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 45-211
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 45-211
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 153

Conread position: 45-212
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 58

Conread position: 45-213
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 45-213
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 45-213
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 82

Conread position: 45-213
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 123, 55

Conread position: 45-213
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 56, 147

Conread position: 45-213
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 45-213
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 45-214
Cow position:
Alignm length: 170
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 45-214
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 34

Conread position: 45-214
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 80

Conread position: 45-214
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 45-214
Cow position:
Alignm length: 171
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 45-214
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 14

Conread position: 45-214
Cow position:
Alignm length: 172
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 72, 137

Conread position: 45-214
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 45-215
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 146

Conread position: 45-215
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 90, 56

Conread position: 45-215
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 45-217
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 45-218
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 112, 54

Conread position: 45-218
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 45-218
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 45-218
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 55, 33

Conread position: 45-218
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 91

Conread position: 45-218
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 104

Conread position: 45-218
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 170, 50

Conread position: 45-218
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 112, 65

Conread position: 45-218
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 45-218
Cow position:
Alignm length: 177
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 45-218
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 57

Conread position: 45-232
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 45-242
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 198

Conread position: 45-251
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 190

Conread position: 45-254
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 171

Conread position: 46-164
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 46-202
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 119, 27

Conread position: 46-214
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 46-215
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 111, 166

Conread position: 46-215
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 46-218
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 14

Conread position: 46-218
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 114, 52

Conread position: 46-229
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 47-224
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 56, 10

Conread position: 52-221
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 50

Conread position: 52-225
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 6

Conread position: 53-214
Cow position:
Alignm length: 168
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 5

Conread position: 53-231
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 103, 5

Conread position: 55-213
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 55-215
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 9

Conread position: 55-229
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 158, 0

Conread position: 56-176
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 56-181
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 56-184
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 56-212
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 44, 129

Conread position: 56-213
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 139

Conread position: 56-213
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 93, 42

Conread position: 56-213
Cow position:
Alignm length: 162
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 56-214
Cow position:
Alignm length: 162
Alignm identity: 128
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 56-214
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 101, 51

Conread position: 56-214
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 141

Conread position: 56-214
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 56-215
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 104, 53

Conread position: 56-218
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 160, 108

Conread position: 56-218
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 57-210
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 57-211
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 57-218
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 101, 19

Conread position: 57-218
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 57-218
Cow position:
Alignm length: 167
Alignm identity: 128
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 105, 0

Conread position: 57-218
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 58-163
Cow position:
Alignm length: 108
Alignm identity: 94
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 58-214
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 58-218
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 111

Conread position: 59-163
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 59-215
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 34

Conread position: 59-218
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 39

Conread position: 59-254
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 101, 41

Conread position: 60-218
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 152, 38

Conread position: 61-218
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 63-212
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 41

Conread position: 63-212
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 63-218
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 110

Conread position: 64-178
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 64-224
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 151, 34

Conread position: 66-218
Cow position:
Alignm length: 155
Alignm identity: 126
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 127, 109

Conread position: 67-214
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 32, 79

Conread position: 67-218
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 148, 39

Conread position: 72-215
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.