Cow genome map

Conread name: rfce09c_d13.y1

Conread position: 5-218
Cow position: chr24:29679457-29679244 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 106, 24

Conread position: 17-215
Cow position: chr24:21519294-21519492 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 26, 81

Conread position: 24-217
Cow position: chr24:16895262-16895070 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 22, 141

Conread position: 42-164
Cow position: chr24:19800734-19800857 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 49, 15

Conread position: 43-178
Cow position: chr24:34565013-34565147 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 49, 22

Conread position: 43-209
Cow position: chr24:18999938-19000106 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 117, 29

Conread position: 43-218
Cow position: chr24:17752225-17752043 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 43-218
Cow position: chr24:20943055-20943230 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 145

Conread position: 45-163
Cow position: chr24:7917472-7917352 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 45-163
Cow position: chr24:30484060-30483939 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 45-165
Cow position: chr24:42007630-42007751 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 45-169
Cow position: chr24:35073983-35074108 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 48, 84

Conread position: 45-184
Cow position: chr24:32054550-32054695 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 45-197
Cow position: chr24:38006816-38006664 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 120, 34

Conread position: 45-202
Cow position: chr24:18390398-18390246 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 45-206
Cow position: chr24:29595920-29595753 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 45-213
Cow position: chr24:17104682-17104507 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 45-213
Cow position: chr24:18485107-18484933 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 155

Conread position: 45-213
Cow position: chr24:18970617-18970445 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 105, 56

Conread position: 45-213
Cow position: chr24:24662240-24662068 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 45-213
Cow position: chr24:30544969-30544803 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 45-213
Cow position: chr24:43432683-43432853 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 101, 61

Conread position: 45-214
Cow position: chr24:28721781-28721948 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 112, 55

Conread position: 45-214
Cow position: chr24:31159507-31159679 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 60

Conread position: 45-214
Cow position: chr24:42825604-42825441 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 45-215
Cow position: chr24:11840079-11840252 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 113, 56

Conread position: 45-215
Cow position: chr24:33944293-33944466 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 75

Conread position: 45-216
Cow position: chr24:40850054-40850217 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 45-218
Cow position: chr24:3493777-3493953 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 112, 12

Conread position: 45-218
Cow position: chr24:16509861-16510046 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 45-218
Cow position: chr24:27052604-27052429 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 14

Conread position: 45-218
Cow position: chr24:34008686-34008504 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 14

Conread position: 45-218
Cow position: chr24:35150412-35150587 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 45-218
Cow position: chr24:35576644-35576471 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 57

Conread position: 45-218
Cow position: chr24:37395319-37395142 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 110, 56

Conread position: 45-218
Cow position: chr24:39523557-39523380 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 109, 60

Conread position: 45-218
Cow position: chr24:40130017-40130198 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 45-218
Cow position: chr24:43200387-43200205 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 50, 21

Conread position: 45-218
Cow position: chr24:43364250-43364427 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 27

Conread position: 45-229
Cow position: chr24:18741680-18741492 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 115, 54

Conread position: 46-214
Cow position: chr24:32204903-32204731 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 83

Conread position: 46-218
Cow position: chr24:16895545-16895368 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 32

Conread position: 47-178
Cow position: chr24:40837669-40837800 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 47-215
Cow position: chr24:17832921-17832756 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 47-215
Cow position: chr24:27900621-27900792 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 10

Conread position: 47-218
Cow position: chr24:34496011-34496190 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 10

Conread position: 48-218
Cow position: chr24:32370024-32369846 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 90, 10

Conread position: 53-218
Cow position: chr24:33465713-33465552 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 5

Conread position: 53-223
Cow position: chr24:30229370-30229546 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 5

Conread position: 56-196
Cow position: chr24:28553651-28553511 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 109, 43

Conread position: 56-202
Cow position: chr24:880530-880681 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 56-209
Cow position: chr24:6957404-6957555 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 56-214
Cow position: chr24:19769389-19769553 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 56-214
Cow position: chr24:21894949-21895113 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 131

Conread position: 56-214
Cow position: chr24:27418200-27418040 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 137

Conread position: 56-218
Cow position: chr24:15373308-15373474 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 101, 39

Conread position: 56-218
Cow position: chr24:17955540-17955376 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 48

Conread position: 56-218
Cow position: chr24:18614900-18615069 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 159

Conread position: 56-218
Cow position: chr24:34742653-34742820 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 48, 165

Conread position: 56-220
Cow position: chr24:16089131-16089299 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 30

Conread position: 56-229
Cow position: chr24:29673421-29673601 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 137

Conread position: 57-158
Cow position: chr24:28045653-28045756 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 57-218
Cow position: chr24:15508636-15508476 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 21

Conread position: 57-218
Cow position: chr24:34390187-34390345 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 13, 38

Conread position: 57-218
Cow position: chr24:38841507-38841353 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 129, 44

Conread position: 57-220
Cow position: chr24:32070869-32071032 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 31

Conread position: 57-232
Cow position: chr24:28600537-28600354 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 168

Conread position: 58-213
Cow position: chr24:24755346-24755510 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 58-216
Cow position: chr24:39911134-39910967 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 58-243
Cow position: chr24:43832426-43832621 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 36, 79

Conread position: 59-214
Cow position: chr24:27290773-27290935 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 141

Conread position: 59-214
Cow position: chr24:28327182-28327017 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 59-214
Cow position: chr24:28690591-28690748 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 50, 19

Conread position: 60-214
Cow position: chr24:7046843-7046686 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 62-229
Cow position: chr24:6102732-6102907 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 66-214
Cow position: chr24:6151705-6151852 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 43

Show alignments to all cow chromosomes.