Cow genome map

Conread name: rfce09c_d13.y1

Conread position: 13-218
Cow position: chr27:17646092-17646305 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 31-214
Cow position: chr27:25809465-25809647 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 47

Conread position: 32-212
Cow position: chr27:15343229-15343405 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 13

Conread position: 33-214
Cow position: chr27:19546458-19546643 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 60, 25

Conread position: 43-160
Cow position: chr27:26979664-26979786 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 43-215
Cow position: chr27:15643215-15643042 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 117, 62

Conread position: 45-152
Cow position: chr27:14902610-14902719 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 45-152
Cow position: chr27:20570161-20570053 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 45-162
Cow position: chr27:7538035-7538153 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 100

Conread position: 45-163
Cow position: chr27:8962214-8962334 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 45-164
Cow position: chr27:11435280-11435400 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 45-164
Cow position: chr27:15925383-15925268 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 45-211
Cow position: chr27:4156044-4155867 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 45-213
Cow position: chr27:6550499-6550333 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 45-213
Cow position: chr27:20497254-20497075 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 45-214
Cow position: chr27:12596807-12596645 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 50

Conread position: 45-214
Cow position: chr27:29380898-29380723 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 45-218
Cow position: chr27:715544-715364 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 37

Conread position: 45-218
Cow position: chr27:4386019-4386198 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 45-218
Cow position: chr27:15215275-15215094 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 93

Conread position: 45-218
Cow position: chr27:17918273-17918450 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 115, 56

Conread position: 45-218
Cow position: chr27:19660977-19660795 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 45-218
Cow position: chr27:23632638-23632463 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 54

Conread position: 45-218
Cow position: chr27:30765078-30764899 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 14

Conread position: 45-218
Cow position: chr27:30868698-30868877 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 45-219
Cow position: chr27:7935116-7935295 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 60

Conread position: 45-219
Cow position: chr27:15865653-15865469 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 45-229
Cow position: chr27:30359447-30359259 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 28

Conread position: 45-229
Cow position: chr27:31017792-31017973 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 168, 23

Conread position: 45-231
Cow position: chr27:18593309-18593123 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 9

Conread position: 45-241
Cow position: chr27:22225553-22225752 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 45-251
Cow position: chr27:27038798-27039005 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 65, 22

Conread position: 46-218
Cow position: chr27:22559783-22559960 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 47-214
Cow position: chr27:28260499-28260667 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 110, 19

Conread position: 48-209
Cow position: chr27:3306809-3306648 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 109, 57

Conread position: 50-218
Cow position: chr27:1636898-1637072 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 55-214
Cow position: chr27:18558391-18558229 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 55-242
Cow position: chr27:27064408-27064596 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 17

Conread position: 56-213
Cow position: chr27:21976080-21975922 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 24

Conread position: 56-218
Cow position: chr27:2592579-2592405 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 56-218
Cow position: chr27:10992388-10992220 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 56-218
Cow position: chr27:14303765-14303601 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 91, 44

Conread position: 56-218
Cow position: chr27:16705283-16705114 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 44

Conread position: 56-218
Cow position: chr27:18922799-18922969 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 118

Conread position: 56-218
Cow position: chr27:22454747-22454910 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 101, 52

Conread position: 56-218
Cow position: chr27:23860199-23860029 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 96

Conread position: 56-218
Cow position: chr27:24371268-24371106 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 17

Conread position: 56-248
Cow position: chr27:8263304-8263502 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 167

Conread position: 57-175
Cow position: chr27:24999710-24999833 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 57-218
Cow position: chr27:1290821-1290988 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 22

Conread position: 58-166
Cow position: chr27:30362274-30362167 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 15

Conread position: 58-198
Cow position: chr27:20514850-20514700 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 58-214
Cow position: chr27:9169616-9169771 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 36, 110

Conread position: 59-215
Cow position: chr27:25277167-25277010 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 14

Conread position: 59-218
Cow position: chr27:22423538-22423379 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 101, 41

Conread position: 62-218
Cow position: chr27:20748982-20749147 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 64-178
Cow position: chr27:25152105-25151993 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 67-218
Cow position: chr27:11561796-11561639 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.