Cow genome map

Conread name: rfce09c_d13.y1

Conread position: 11-214
Cow position:
Alignm length: 213
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 48

Conread position: 13-229
Cow position:
Alignm length: 221
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 16

Conread position: 14-214
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 31

Conread position: 18-155
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 19-213
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 19-214
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 61

Conread position: 43-178
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 85

Conread position: 43-214
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 59

Conread position: 43-214
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 23

Conread position: 43-218
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 114, 36

Conread position: 43-218
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 43-251
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 58

Conread position: 45-150
Cow position:
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 45-155
Cow position:
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 45-157
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 45-158
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 45-158
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 45-163
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 45-164
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 45-168
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 45-173
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 45-196
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 107, 50

Conread position: 45-198
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 45-200
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 37

Conread position: 45-203
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 45-204
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 45-210
Cow position:
Alignm length: 166
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 45-211
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 53

Conread position: 45-212
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 45-212
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 56, 107

Conread position: 45-213
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 86

Conread position: 45-213
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 45-213
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 21

Conread position: 45-213
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 112, 39

Conread position: 45-213
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 45-213
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 45-213
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 45-213
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 45-213
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 112, 12

Conread position: 45-214
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 35

Conread position: 45-214
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 109, 0

Conread position: 45-214
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 45-214
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 45-214
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 21

Conread position: 45-215
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 109, 0

Conread position: 45-215
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 45-215
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 37

Conread position: 45-215
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 115, 50

Conread position: 45-218
Cow position:
Alignm length: 181
Alignm identity: 143
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 39, 84

Conread position: 45-218
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 45-218
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 45-218
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 146

Conread position: 45-218
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 31

Conread position: 45-218
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 72

Conread position: 45-218
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 58, 53

Conread position: 45-218
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 45-218
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 80

Conread position: 45-218
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 45-218
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 45-218
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 117, 0

Conread position: 45-218
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 45-218
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 170, 72

Conread position: 45-218
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 45-218
Cow position:
Alignm length: 175
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 168, 0

Conread position: 45-218
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 45-218
Cow position:
Alignm length: 177
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 28, 12

Conread position: 45-218
Cow position:
Alignm length: 182
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 23

Conread position: 45-218
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 37

Conread position: 45-218
Cow position:
Alignm length: 179
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 115, 12

Conread position: 45-218
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 170, 53

Conread position: 45-220
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 76

Conread position: 45-226
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 170, 54

Conread position: 45-229
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 56

Conread position: 45-229
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 115, 60

Conread position: 45-233
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 122

Conread position: 45-242
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 170, 34

Conread position: 45-254
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 50

Conread position: 46-178
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 46-209
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 61

Conread position: 46-213
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 46-218
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 114, 0

Conread position: 46-218
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 167, 37

Conread position: 46-218
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 70

Conread position: 46-218
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 169, 48

Conread position: 46-218
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 46-218
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 46-218
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 46-218
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 46-218
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 48-218
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 112, 53

Conread position: 52-218
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 53-210
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 5

Conread position: 53-214
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 103, 5

Conread position: 53-254
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 104, 5

Conread position: 55-215
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 101, 46

Conread position: 56-158
Cow position:
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 56-167
Cow position:
Alignm length: 112
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 56-188
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 22

Conread position: 56-213
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 56-214
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 56-218
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 24

Conread position: 56-218
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 56-218
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 56-218
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 64

Conread position: 56-218
Cow position:
Alignm length: 171
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 64

Conread position: 56-218
Cow position:
Alignm length: 166
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 123, 85

Conread position: 56-218
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 104, 50

Conread position: 56-218
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 45

Conread position: 56-218
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 44

Conread position: 56-218
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 106, 38

Conread position: 56-218
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 48

Conread position: 56-229
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 56-229
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 104, 22

Conread position: 56-229
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 79, 44

Conread position: 56-231
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 101, 114

Conread position: 56-242
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 51

Conread position: 56-247
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 142

Conread position: 57-179
Cow position:
Alignm length: 123
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 57-213
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 93

Conread position: 57-213
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 57-215
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 58-214
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 42

Conread position: 58-218
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 58-218
Cow position:
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 48

Conread position: 59-215
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 59-218
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 99, 131

Conread position: 61-217
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 62-218
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 67

Conread position: 63-214
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 63-229
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 64-213
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 64-214
Cow position:
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 42

Conread position: 64-218
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 30

Conread position: 66-218
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 66-218
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 135

Conread position: 66-218
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 66-218
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 67-211
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 31

Conread position: 67-214
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 25

Conread position: 69-218
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 85-215
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 16

Show alignments to all cow chromosomes.