Cow genome map

Conread name: rfce09c_d13.y1

Conread position: 2-212
Cow position:
Alignm length: 214
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 128

Conread position: 11-215
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 22, 93

Conread position: 13-214
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 18

Conread position: 13-218
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 32

Conread position: 19-214
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 138, 15

Conread position: 21-213
Cow position:
Alignm length: 198
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 82

Conread position: 23-158
Cow position:
Alignm length: 137
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 78, 34

Conread position: 41-213
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 16

Conread position: 43-213
Cow position:
Alignm length: 177
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 43-213
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 150

Conread position: 43-214
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 43-218
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 111, 52

Conread position: 43-218
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 130

Conread position: 43-231
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 117, 49

Conread position: 45-141
Cow position:
Alignm length: 97
Alignm identity: 80
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 45-157
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 45-158
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 45-159
Cow position:
Alignm length: 116
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 14

Conread position: 45-163
Cow position:
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 45-163
Cow position:
Alignm length: 121
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 59, 43

Conread position: 45-173
Cow position:
Alignm length: 132
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 45-176
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 45-196
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 45-196
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 66, 27

Conread position: 45-198
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 136

Conread position: 45-198
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 46

Conread position: 45-208
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 99

Conread position: 45-210
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 156

Conread position: 45-212
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 13

Conread position: 45-213
Cow position:
Alignm length: 174
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 14

Conread position: 45-213
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 62

Conread position: 45-213
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 113, 65

Conread position: 45-213
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 57

Conread position: 45-213
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 45-213
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 18

Conread position: 45-213
Cow position:
Alignm length: 173
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 55

Conread position: 45-213
Cow position:
Alignm length: 171
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 79

Conread position: 45-213
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 120, 54

Conread position: 45-214
Cow position:
Alignm length: 173
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 45-214
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 109, 56

Conread position: 45-214
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 68

Conread position: 45-214
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 27

Conread position: 45-214
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 113, 56

Conread position: 45-214
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 95

Conread position: 45-214
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 45-215
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 74

Conread position: 45-215
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 45-215
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 12, 157

Conread position: 45-218
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 170, 36

Conread position: 45-218
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 45-218
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 170, 50

Conread position: 45-218
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 34

Conread position: 45-218
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 81, 56

Conread position: 45-218
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 170, 101

Conread position: 45-218
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 114, 86

Conread position: 45-218
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 45-218
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 45-218
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 170, 55

Conread position: 45-218
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 115, 0

Conread position: 45-218
Cow position:
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 126

Conread position: 45-218
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 45-218
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 32

Conread position: 45-218
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 45-218
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 112, 62

Conread position: 45-218
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 45-223
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 45-229
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 15

Conread position: 45-229
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 115, 47

Conread position: 45-231
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 170, 120

Conread position: 45-232
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 45-244
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 78

Conread position: 45-245
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 63

Conread position: 45-252
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 56

Conread position: 46-158
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 46-163
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 46-164
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 46-211
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 46-213
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 46-214
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 46, 86

Conread position: 46-218
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 57, 27

Conread position: 46-218
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 12

Conread position: 46-218
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 108

Conread position: 46-253
Cow position:
Alignm length: 211
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 105, 49

Conread position: 47-158
Cow position:
Alignm length: 112
Alignm identity: 94
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 47-209
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 47-213
Cow position:
Alignm length: 169
Alignm identity: 133
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 48, 13

Conread position: 47-218
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 46, 153

Conread position: 47-218
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 47-247
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 53, 11

Conread position: 49-163
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 55-213
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 55-219
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 56-158
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 56-158
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 56-164
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 56-185
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 56-211
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 47

Conread position: 56-213
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 137

Conread position: 56-214
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 0

Conread position: 56-214
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 56-218
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 56-218
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 56-218
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 35, 108

Conread position: 56-218
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 157

Conread position: 56-218
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 56-218
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 37, 46

Conread position: 56-229
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 51

Conread position: 56-253
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 137

Conread position: 56-255
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 176

Conread position: 57-198
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 57-214
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 110, 49

Conread position: 57-214
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 103, 6

Conread position: 57-214
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 57-215
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 136

Conread position: 57-215
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 37

Conread position: 57-216
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 57-218
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 164

Conread position: 57-229
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 103, 0

Conread position: 57-240
Cow position:
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 103

Conread position: 60-213
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 61

Conread position: 60-218
Cow position:
Alignm length: 160
Alignm identity: 128
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 155, 39

Conread position: 61-213
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 62-212
Cow position:
Alignm length: 151
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 62-218
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 62-218
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 153, 0

Conread position: 63-157
Cow position:
Alignm length: 95
Alignm identity: 79
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 63-229
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 69

Conread position: 66-214
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 104-218
Cow position:
Alignm length: 115
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.