Cow genome map
Conread name: | rfce09c_d13.y1 |
Conread position: | 13-214 |
Cow position: | chr5:59115295-59115496 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 149 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 21, 34 |
Conread position: | 14-214 |
Cow position: | chr5:29353225-29353011 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 154 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 34, 11 |
Conread position: | 15-163 |
Cow position: | chr5:31918557-31918702 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 112 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 19-251 |
Cow position: | chr5:22643308-22643084 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 165 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 65, 15 |
Conread position: | 43-202 |
Cow position: | chr5:21920314-21920483 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 128 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 49, 14 |
Conread position: | 43-213 |
Cow position: | chr5:41165024-41165208 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 135 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 43-229 |
Cow position: | chr5:64758833-64758637 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 138 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 45-154 |
Cow position: | chr5:7140168-7140056 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 90 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 45-157 |
Cow position: | chr5:30293632-30293517 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 93 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 45-158 |
Cow position: | chr5:51801032-51800918 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 95 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 45-160 |
Cow position: | chr5:16509036-16509157 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 45-161 |
Cow position: | chr5:58144661-58144542 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 45-163 |
Cow position: | chr5:56820322-56820202 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 9, 15 |
Conread position: | 45-164 |
Cow position: | chr5:45273560-45273441 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 95 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 61, 46 |
Conread position: | 45-176 |
Cow position: | chr5:40039830-40039694 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 111 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 45-202 |
Cow position: | chr5:28927649-28927485 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 122 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 45-210 |
Cow position: | chr5:17999552-17999386 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 119 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 45-213 |
Cow position: | chr5:16893833-16893658 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 128 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 45-213 |
Cow position: | chr5:51935132-51935302 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 132 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 115, 56 |
Conread position: | 45-214 |
Cow position: | chr5:11769208-11769383 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 128 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 45-214 |
Cow position: | chr5:19752245-19752416 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 123 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 56, 124 |
Conread position: | 45-214 |
Cow position: | chr5:54350423-54350247 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 132 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 9, 15 |
Conread position: | 45-214 |
Cow position: | chr5:55928881-55929058 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 130 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 45-215 |
Cow position: | chr5:28224394-28224567 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 128 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 62, 53 |
Conread position: | 45-218 |
Cow position: | chr5:458431-458607 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 137 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 115, 61 |
Conread position: | 45-218 |
Cow position: | chr5:2309616-2309437 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 132 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 50, 28 |
Conread position: | 45-218 |
Cow position: | chr5:4032052-4031867 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 138 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 45-218 |
Cow position: | chr5:18289070-18289241 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 131 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 54, 95 |
Conread position: | 45-218 |
Cow position: | chr5:21040033-21039864 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 133 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 170, 33 |
Conread position: | 45-218 |
Cow position: | chr5:22445855-22446030 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 131 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 102, 12 |
Conread position: | 45-218 |
Cow position: | chr5:23678762-23678584 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 133 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 56, 164 |
Conread position: | 45-218 |
Cow position: | chr5:29827989-29828165 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 136 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 98, 49 |
Conread position: | 45-218 |
Cow position: | chr5:44796791-44796614 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 129 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 115, 34 |
Conread position: | 45-218 |
Cow position: | chr5:44848080-44847902 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 134 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 90, 47 |
Conread position: | 45-218 |
Cow position: | chr5:52165238-52165060 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 134 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 48, 151 |
Conread position: | 45-218 |
Cow position: | chr5:53710750-53710570 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 129 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 45-218 |
Cow position: | chr5:54311275-54311455 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 131 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 45-218 |
Cow position: | chr5:63234886-63234710 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 130 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 9, 14 |
Conread position: | 45-219 |
Cow position: | chr5:14550641-14550464 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 128 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 117, 55 |
Conread position: | 45-224 |
Cow position: | chr5:11668245-11668060 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 138 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 28, 54 |
Conread position: | 45-224 |
Cow position: | chr5:37808729-37808538 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 140 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 53, 28 |
Conread position: | 45-253 |
Cow position: | chr5:16214624-16214839 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 154 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 46-163 |
Cow position: | chr5:49685329-49685212 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 92 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 46-178 |
Cow position: | chr5:60747337-60747202 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 46-196 |
Cow position: | chr5:63627584-63627432 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 46, 32 |
Conread position: | 46-212 |
Cow position: | chr5:30845054-30845222 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 123 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 53, 20 |
Conread position: | 46-214 |
Cow position: | chr5:28035682-28035857 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 127 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 46-214 |
Cow position: | chr5:41294022-41294194 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 129 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 43, 83 |
Conread position: | 46-215 |
Cow position: | chr5:13717626-13717455 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 131 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 114, 89 |
Conread position: | 47-214 |
Cow position: | chr5:15470875-15471043 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 122 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 47, 10 |
Conread position: | 47-214 |
Cow position: | chr5:52645136-52644966 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 129 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 113, 11 |
Conread position: | 52-212 |
Cow position: | chr5:23357283-23357441 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 115 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 56-141 |
Cow position: | chr5:17644704-17644617 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 78 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 56-178 |
Cow position: | chr5:34528506-34528625 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 56-202 |
Cow position: | chr5:57994916-57994769 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 110 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 104, 45 |
Conread position: | 56-213 |
Cow position: | chr5:37646595-37646431 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 122 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 28, 138 |
Conread position: | 56-213 |
Cow position: | chr5:52000173-52000331 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 125 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 44, 126 |
Conread position: | 56-213 |
Cow position: | chr5:67212307-67212474 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 56-214 |
Cow position: | chr5:72564713-72564878 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 120 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 56-215 |
Cow position: | chr5:18574124-18574288 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 120 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 56-215 |
Cow position: | chr5:43992273-43992439 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 130 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 56-216 |
Cow position: | chr5:55955858-55956029 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 136 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 38, 149 |
Conread position: | 56-218 |
Cow position: | chr5:32696872-32696704 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 126 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 48, 135 |
Conread position: | 56-218 |
Cow position: | chr5:39258467-39258624 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 122 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 56-218 |
Cow position: | chr5:45420183-45420018 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 126 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 103, 44 |
Conread position: | 56-218 |
Cow position: | chr5:66972379-66972548 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 125 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 56-253 |
Cow position: | chr5:15479075-15479277 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 146 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 38, 160 |
Conread position: | 57-210 |
Cow position: | chr5:4617319-4617481 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 125 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 49, 151 |
Conread position: | 57-214 |
Cow position: | chr5:47323417-47323576 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 130 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 103, 50 |
Conread position: | 57-214 |
Cow position: | chr5:50575737-50575897 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 119 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 103, 143 |
Conread position: | 57-214 |
Cow position: | chr5:57156362-57156198 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 79, 44 |
Conread position: | 57-218 |
Cow position: | chr5:63987497-63987327 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 131 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 44, 117 |
Conread position: | 57-219 |
Cow position: | chr5:4280400-4280568 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 130 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 77, 44 |
Conread position: | 58-196 |
Cow position: | chr5:44994089-44993946 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 58-214 |
Cow position: | chr5:30805121-30805278 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 116 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 102, 20 |
Conread position: | 58-215 |
Cow position: | chr5:58555093-58555252 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 43, 24 |
Conread position: | 58-215 |
Cow position: | chr5:62142627-62142791 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 127 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 59-213 |
Cow position: | chr5:54086497-54086651 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 115 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 72, 43 |
Conread position: | 59-218 |
Cow position: | chr5:26262722-26262560 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 126 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 45, 110 |
Conread position: | 59-252 |
Cow position: | chr5:14904118-14903916 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 148 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 25, 133 |
Conread position: | 60-213 |
Cow position: | chr5:49501870-49501711 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 119 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 62-218 |
Cow position: | chr5:55796008-55795847 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 126 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 95, 26 |
Conread position: | 63-229 |
Cow position: | chr5:35969493-35969662 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 124 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 94, 31 |
Conread position: | 68-218 |
Cow position: | chr5:41981333-41981487 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 70-214 |
Cow position: | chr5:57101561-57101409 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 115 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 31, 0 |
Show alignments to all cow chromosomes.