Cow genome map

Conread name: rfce17c_a1.y1

Conread position: 1-159
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 9

Conread position: 1-161
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 3-140
Cow position:
Alignm length: 139
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 6

Conread position: 4-156
Cow position:
Alignm length: 153
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 5-127
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 55, 13

Conread position: 5-157
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 19

Conread position: 6-121
Cow position:
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 6-138
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 6-145
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 6-146
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 106

Conread position: 6-146
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 6-154
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 8-124
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 8-157
Cow position:
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 22

Conread position: 8-161
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 29

Conread position: 10-148
Cow position:
Alignm length: 140
Alignm identity: 116
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 13

Conread position: 10-156
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 19

Conread position: 10-157
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 28

Conread position: 10-157
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 62

Conread position: 10-157
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 102

Conread position: 10-161
Cow position:
Alignm length: 153
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 11-100
Cow position:
Alignm length: 93
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 11-129
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 96

Conread position: 11-133
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 10

Conread position: 11-135
Cow position:
Alignm length: 126
Alignm identity: 106
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 96

Conread position: 11-146
Cow position:
Alignm length: 137
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 11-147
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 25

Conread position: 11-147
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 18

Conread position: 11-148
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 11-148
Cow position:
Alignm length: 139
Alignm identity: 115
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 45, 11

Conread position: 11-148
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 11-148
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 20

Conread position: 11-155
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 16, 48

Conread position: 11-157
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 11-161
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 12-126
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 12

Conread position: 12-146
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 12-156
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 12-157
Cow position:
Alignm length: 147
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 43

Conread position: 12-157
Cow position:
Alignm length: 146
Alignm identity: 124
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 96, 0

Conread position: 12-157
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 13-155
Cow position:
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 13-157
Cow position:
Alignm length: 146
Alignm identity: 117
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 44, 11

Conread position: 15-127
Cow position:
Alignm length: 114
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 87

Conread position: 15-146
Cow position:
Alignm length: 132
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 16-157
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 40, 9

Conread position: 19-125
Cow position:
Alignm length: 111
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 19-148
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 19-157
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 20-133
Cow position:
Alignm length: 116
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 20-135
Cow position:
Alignm length: 117
Alignm identity: 99
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 28

Conread position: 20-138
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 20-143
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 18

Conread position: 20-146
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 20-148
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 16

Conread position: 20-148
Cow position:
Alignm length: 131
Alignm identity: 109
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 16

Conread position: 20-148
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 20-155
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 82

Conread position: 20-155
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 11

Conread position: 20-156
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 16

Conread position: 20-156
Cow position:
Alignm length: 138
Alignm identity: 113
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 20-156
Cow position:
Alignm length: 138
Alignm identity: 113
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 37, 47

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 114
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 37, 110

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 16

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 16

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 113
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 31

Conread position: 20-157
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 16

Conread position: 20-157
Cow position:
Alignm length: 141
Alignm identity: 115
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 104

Conread position: 20-157
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 20-161
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 20-161
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 10

Conread position: 20-163
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 21-156
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 21-161
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 43

Conread position: 23-114
Cow position:
Alignm length: 93
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 23-144
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 13

Conread position: 23-144
Cow position:
Alignm length: 123
Alignm identity: 102
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 99

Conread position: 23-157
Cow position:
Alignm length: 136
Alignm identity: 113
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 23-157
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 23-161
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 24-147
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 24-157
Cow position:
Alignm length: 135
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 64

Conread position: 25-147
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 25-157
Cow position:
Alignm length: 134
Alignm identity: 110
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 105

Conread position: 25-157
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 25-157
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 11

Conread position: 25-161
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 25-161
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 86

Conread position: 26-161
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 26-161
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 10

Conread position: 27-148
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 71

Conread position: 27-157
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 29, 9

Conread position: 27-161
Cow position:
Alignm length: 136
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 28-140
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 8

Conread position: 28-147
Cow position:
Alignm length: 122
Alignm identity: 96
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 28-156
Cow position:
Alignm length: 129
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 28-160
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 28-160
Cow position:
Alignm length: 134
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 30-157
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 26, 77

Conread position: 31-148
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 71

Conread position: 32-143
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 32-147
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 32-148
Cow position:
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 100

Conread position: 32-148
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 71

Conread position: 32-157
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 32-161
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 36-147
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 37-148
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 72

Conread position: 38-161
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 48-163
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 0

Show alignments to all cow chromosomes.