Cow genome map

Conread name: rfce17c_a1.y1

Conread position: 1-108
Cow position:
Alignm length: 110
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 26, 19

Conread position: 1-148
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 88

Conread position: 1-161
Cow position:
Alignm length: 166
Alignm identity: 132
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 2-157
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 62

Conread position: 3-145
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 121

Conread position: 4-156
Cow position:
Alignm length: 154
Alignm identity: 112
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 52, 32

Conread position: 5-139
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 5-146
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 51, 20

Conread position: 5-161
Cow position:
Alignm length: 157
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 6-155
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 6-156
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 105

Conread position: 6-157
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 59

Conread position: 8-114
Cow position:
Alignm length: 109
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 8-157
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 9-148
Cow position:
Alignm length: 142
Alignm identity: 116
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 85

Conread position: 9-157
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 10-108
Cow position:
Alignm length: 100
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 10-118
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 10-143
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 26

Conread position: 10-145
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 26

Conread position: 10-147
Cow position:
Alignm length: 140
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 83

Conread position: 10-156
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 10-156
Cow position:
Alignm length: 151
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 10-157
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 10-157
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 46, 14

Conread position: 10-157
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 58

Conread position: 10-160
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 10-161
Cow position:
Alignm length: 154
Alignm identity: 123
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 10

Conread position: 11-156
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 111

Conread position: 11-157
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 76

Conread position: 12-141
Cow position:
Alignm length: 131
Alignm identity: 110
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 12-148
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 44, 8

Conread position: 12-154
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 54

Conread position: 12-156
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 91

Conread position: 12-157
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 12-161
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 58

Conread position: 13-121
Cow position:
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 13-144
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 13-144
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 23

Conread position: 13-145
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 13-146
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 25

Conread position: 13-148
Cow position:
Alignm length: 138
Alignm identity: 112
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 12, 24

Conread position: 13-161
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 14-147
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 42, 22

Conread position: 14-156
Cow position:
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 53

Conread position: 14-157
Cow position:
Alignm length: 145
Alignm identity: 118
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 15-135
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 22

Conread position: 15-161
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 15-161
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 17-156
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 11, 96

Conread position: 18-144
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 18-157
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 16, 95

Conread position: 18-157
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 19-145
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 19-161
Cow position:
Alignm length: 144
Alignm identity: 122
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 37, 11

Conread position: 20-127
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 6, 39

Conread position: 20-144
Cow position:
Alignm length: 126
Alignm identity: 105
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 91

Conread position: 20-146
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 20-146
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 20-146
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 20-147
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 102

Conread position: 20-148
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 11

Conread position: 20-156
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 9, 42

Conread position: 20-156
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 103

Conread position: 20-156
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 112

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 66

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 18

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 17

Conread position: 20-157
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 20-157
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 20-159
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 20-161
Cow position:
Alignm length: 143
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 18

Conread position: 20-161
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 20-162
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 20-162
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 38

Conread position: 21-161
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 22-134
Cow position:
Alignm length: 114
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 34, 15

Conread position: 22-135
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 23-139
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 106

Conread position: 23-161
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 33, 88

Conread position: 24-157
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 12

Conread position: 25-147
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 25-156
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 85

Conread position: 25-156
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 72

Conread position: 25-157
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 31, 86

Conread position: 25-157
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 32, 84

Conread position: 26-144
Cow position:
Alignm length: 121
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 97

Conread position: 27-146
Cow position:
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 27-147
Cow position:
Alignm length: 122
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 9

Conread position: 27-156
Cow position:
Alignm length: 131
Alignm identity: 109
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 91

Conread position: 27-157
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 27-161
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 28-124
Cow position:
Alignm length: 98
Alignm identity: 81
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 28-126
Cow position:
Alignm length: 100
Alignm identity: 84
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 28-145
Cow position:
Alignm length: 119
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 92

Conread position: 28-148
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 9

Conread position: 28-156
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 28-157
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 28-161
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 76

Conread position: 30-145
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 31-151
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 25, 78

Conread position: 32-157
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 33-148
Cow position:
Alignm length: 117
Alignm identity: 99
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 33-156
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 33-156
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 96

Conread position: 36-157
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 47

Conread position: 43-147
Cow position:
Alignm length: 106
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 53-156
Cow position:
Alignm length: 104
Alignm identity: 90
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 53-157
Cow position:
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 45

Conread position: 60-161
Cow position:
Alignm length: 102
Alignm identity: 90
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 64-161
Cow position:
Alignm length: 98
Alignm identity: 80
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.