Cow genome map


           Conread name:
           rfce17c_a1.y1
        

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               2-163
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               55, 101
               

               Conread position:
               3-140
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               4-148
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 15
               

               Conread position:
               4-161
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               5-156
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               5-157
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 81
               

               Conread position:
               5-161
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               5, 66
               

               Conread position:
               6-157
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               51, 115
               

               Conread position:
               6-157
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               7-147
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               47, 73
               

               Conread position:
               8-144
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               8-157
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               49, 10
               

               Conread position:
               8-157
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               8-161
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               48, 11
               

               Conread position:
               9-156
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               47, 55
               

               Conread position:
               9-156
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               9-157
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 27
               

               Conread position:
               9-157
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               47, 56
               

               Conread position:
               9-157
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               9-161
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               10-144
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               10-145
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               10-146
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               10-147
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               10-147
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               46, 92
               

               Conread position:
               10-147
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               21, 57
               

               Conread position:
               10-156
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               10-157
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               47, 26
               

               Conread position:
               10-157
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               64, 36
               

               Conread position:
               10-157
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               10-157
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               11-146
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               26, 113
               

               Conread position:
               11-157
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               13, 135
               

               Conread position:
               11-157
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               12-125
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               12-161
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               13-144
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               13-153
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               43, 96
               

               Conread position:
               13-161
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               14-126
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               14-148
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               14-157
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-157
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               14-161
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 127
               

               Conread position:
               15-147
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               15-157
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               12, 124
               

               Conread position:
               16-157
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               41, 131
               

               Conread position:
               18-156
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               19-148
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               37, 11
               

               Conread position:
               19-157
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 88
               

               Conread position:
               20-148
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               20-155
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               20-156
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               36, 100
               

               Conread position:
               20-156
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               20-157
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 102
               

               Conread position:
               20-157
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               36, 110
               

               Conread position:
               20-157
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               20-157
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               20-161
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               6, 31
               

               Conread position:
               21-148
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               36, 46
               

               Conread position:
               21-157
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               22-161
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               23-145
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               24-154
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               25-123
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               25-144
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               25-146
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               25-156
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               26-137
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               26-147
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               31, 59
               

               Conread position:
               27-148
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               29, 70
               

               Conread position:
               27-148
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               28-156
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               28, 43
               

               Conread position:
               28-156
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               30-156
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               30-157
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               30-161
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 32
               

               Conread position:
               31-146
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               31-161
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               32-148
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               32-148
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               24, 58
               

               Conread position:
               32-161
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               33-161
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               35-161
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               37-148
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               41-157
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               44-147
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               53-155
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.