Cow genome map

Conread name: rfce17c_a1.y1

Conread position: 1-145
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 6

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 1-157
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 55, 8

Conread position: 2-148
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 52, 30

Conread position: 2-157
Cow position:
Alignm length: 158
Alignm identity: 131
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 17, 7

Conread position: 3-148
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 21

Conread position: 3-157
Cow position:
Alignm length: 157
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 4-157
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 5-125
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 52, 13

Conread position: 6-156
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 25

Conread position: 6-157
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 6-161
Cow position:
Alignm length: 159
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 8-122
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 49, 15

Conread position: 8-157
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 8-157
Cow position:
Alignm length: 152
Alignm identity: 125
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 10

Conread position: 8-163
Cow position:
Alignm length: 158
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 9-145
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 9-146
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 22

Conread position: 9-147
Cow position:
Alignm length: 140
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 27

Conread position: 9-148
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 47, 28

Conread position: 9-148
Cow position:
Alignm length: 141
Alignm identity: 117
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 15

Conread position: 9-157
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 16

Conread position: 9-157
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 10-141
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 26

Conread position: 10-145
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 26

Conread position: 10-148
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 30

Conread position: 10-148
Cow position:
Alignm length: 140
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 15

Conread position: 10-156
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 28

Conread position: 10-157
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 10-157
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 55

Conread position: 10-161
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 20

Conread position: 10-161
Cow position:
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 59

Conread position: 10-161
Cow position:
Alignm length: 155
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 28

Conread position: 11-141
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 11-148
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 112

Conread position: 11-156
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 45, 25

Conread position: 11-157
Cow position:
Alignm length: 149
Alignm identity: 120
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 11-157
Cow position:
Alignm length: 148
Alignm identity: 120
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 27

Conread position: 11-159
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 12-130
Cow position:
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 52

Conread position: 12-148
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 18

Conread position: 12-156
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 55

Conread position: 12-156
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 107

Conread position: 12-157
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 12-157
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 30

Conread position: 12-157
Cow position:
Alignm length: 147
Alignm identity: 121
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 44, 0

Conread position: 13-156
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 43, 23

Conread position: 13-157
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 0

Conread position: 14-145
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 42, 22

Conread position: 14-157
Cow position:
Alignm length: 145
Alignm identity: 124
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 0

Conread position: 15-156
Cow position:
Alignm length: 143
Alignm identity: 118
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 83

Conread position: 15-157
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 45, 35

Conread position: 18-161
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 19

Conread position: 19-157
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 37, 88

Conread position: 20-98
Cow position:
Alignm length: 80
Alignm identity: 73
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 20-143
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 83

Conread position: 20-144
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 17

Conread position: 20-147
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 102, 16

Conread position: 20-147
Cow position:
Alignm length: 129
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 20-148
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 92

Conread position: 20-148
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 91

Conread position: 20-155
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 48

Conread position: 20-156
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 20-157
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 16

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 103

Conread position: 20-157
Cow position:
Alignm length: 140
Alignm identity: 113
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 16

Conread position: 20-161
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 20-161
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 16

Conread position: 20-161
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 16

Conread position: 20-163
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 10

Conread position: 21-156
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 17

Conread position: 22-147
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 22-148
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 15

Conread position: 22-157
Cow position:
Alignm length: 137
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 23-146
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 23-148
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 76

Conread position: 23-148
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 23-157
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 33, 87

Conread position: 23-157
Cow position:
Alignm length: 136
Alignm identity: 111
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 57

Conread position: 23-161
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 13

Conread position: 24-157
Cow position:
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 24-157
Cow position:
Alignm length: 136
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 25-155
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 25-156
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 82

Conread position: 25-156
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 25-157
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 11

Conread position: 25-157
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 25-157
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 31, 98

Conread position: 25-157
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 77

Conread position: 25-157
Cow position:
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 38

Conread position: 26-148
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 49

Conread position: 26-161
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 11

Conread position: 26-161
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 27-161
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 28-145
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 28-145
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 81

Conread position: 28-157
Cow position:
Alignm length: 131
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 74

Conread position: 31-134
Cow position:
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 31-147
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 79

Conread position: 32-146
Cow position:
Alignm length: 116
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 32-147
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 90

Conread position: 32-156
Cow position:
Alignm length: 126
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 33-142
Cow position:
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 33-143
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 33-146
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 86

Conread position: 33-156
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 114

Conread position: 36-146
Cow position:
Alignm length: 112
Alignm identity: 92
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 37-156
Cow position:
Alignm length: 122
Alignm identity: 101
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 37-157
Cow position:
Alignm length: 122
Alignm identity: 101
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 38-157
Cow position:
Alignm length: 121
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 39-157
Cow position:
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 27

Conread position: 40-157
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 87

Conread position: 42-157
Cow position:
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 45-156
Cow position:
Alignm length: 113
Alignm identity: 96
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 45-161
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 11, 0

Show alignments to all cow chromosomes.