Cow genome map

Conread name: rfce17c_a1.y1

Conread position: 1-148
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 2-105
Cow position:
Alignm length: 105
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 5

Conread position: 3-157
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 53, 33

Conread position: 4-161
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 11, 83

Conread position: 5-145
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 6-130
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 50, 19

Conread position: 6-137
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 19

Conread position: 6-147
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 6-148
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 63

Conread position: 7-161
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 7-163
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 47, 99

Conread position: 8-135
Cow position:
Alignm length: 130
Alignm identity: 106
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 111

Conread position: 8-156
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 28

Conread position: 8-157
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 8-157
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 49, 17

Conread position: 8-161
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 79, 38

Conread position: 8-161
Cow position:
Alignm length: 155
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 15

Conread position: 9-147
Cow position:
Alignm length: 143
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 9-155
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 29

Conread position: 9-156
Cow position:
Alignm length: 151
Alignm identity: 123
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 10-137
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 20, 102

Conread position: 10-137
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 10-138
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 10-144
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 10-148
Cow position:
Alignm length: 140
Alignm identity: 113
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 72

Conread position: 10-148
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 93

Conread position: 10-157
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 101

Conread position: 10-157
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 27

Conread position: 10-157
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 27

Conread position: 10-161
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 15

Conread position: 10-161
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 97

Conread position: 10-161
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 24

Conread position: 11-146
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 121

Conread position: 11-148
Cow position:
Alignm length: 139
Alignm identity: 113
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 13

Conread position: 11-156
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 45, 53

Conread position: 11-157
Cow position:
Alignm length: 149
Alignm identity: 120
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 11-157
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 11-157
Cow position:
Alignm length: 150
Alignm identity: 124
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 11-157
Cow position:
Alignm length: 147
Alignm identity: 120
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 12-148
Cow position:
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 18

Conread position: 12-155
Cow position:
Alignm length: 145
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 12-157
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 21

Conread position: 12-157
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 7

Conread position: 12-157
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 105

Conread position: 12-161
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 8

Conread position: 13-147
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 43, 125

Conread position: 13-147
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 11

Conread position: 13-156
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 43, 23

Conread position: 13-157
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 9, 24

Conread position: 13-157
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 10

Conread position: 13-157
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 43, 23

Conread position: 15-161
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 88

Conread position: 18-142
Cow position:
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 18-146
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 18-148
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 95

Conread position: 18-156
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 84

Conread position: 18-157
Cow position:
Alignm length: 141
Alignm identity: 114
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 20

Conread position: 18-157
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 19-142
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 19-148
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 17

Conread position: 19-156
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 19-157
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 38, 99

Conread position: 19-161
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 92

Conread position: 20-124
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 20-124
Cow position:
Alignm length: 106
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 20-133
Cow position:
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 85

Conread position: 20-144
Cow position:
Alignm length: 126
Alignm identity: 105
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 36, 50

Conread position: 20-146
Cow position:
Alignm length: 128
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 20-147
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 16

Conread position: 20-147
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 92

Conread position: 20-147
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 77

Conread position: 20-148
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 20-148
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 97

Conread position: 20-156
Cow position:
Alignm length: 142
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 44

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 16

Conread position: 20-157
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 72

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 20-161
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 20-161
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 84

Conread position: 20-161
Cow position:
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 47

Conread position: 20-161
Cow position:
Alignm length: 143
Alignm identity: 120
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 21-148
Cow position:
Alignm length: 130
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 80

Conread position: 21-156
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 21-157
Cow position:
Alignm length: 138
Alignm identity: 114
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 36, 79

Conread position: 21-157
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 21-157
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 21-157
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 21-157
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 70

Conread position: 21-161
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 22-148
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 22, 81

Conread position: 23-141
Cow position:
Alignm length: 120
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 23-148
Cow position:
Alignm length: 127
Alignm identity: 105
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 23-156
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 33, 95

Conread position: 23-157
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 24-124
Cow position:
Alignm length: 102
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 24-156
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 88

Conread position: 24-161
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 25-145
Cow position:
Alignm length: 122
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 25-148
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 93

Conread position: 25-148
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 32, 78

Conread position: 25-156
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 78

Conread position: 25-156
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 31, 106

Conread position: 25-157
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 25-157
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 13

Conread position: 25-157
Cow position:
Alignm length: 134
Alignm identity: 109
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 25-161
Cow position:
Alignm length: 138
Alignm identity: 115
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 98

Conread position: 25-161
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 71

Conread position: 26-157
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 95

Conread position: 27-148
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 27-156
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 9

Conread position: 27-158
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 28-145
Cow position:
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 28-147
Cow position:
Alignm length: 121
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 28-156
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 28-156
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 28-156
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 83

Conread position: 28-157
Cow position:
Alignm length: 132
Alignm identity: 107
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 30-116
Cow position:
Alignm length: 88
Alignm identity: 76
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 30-157
Cow position:
Alignm length: 129
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 30-160
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 7

Conread position: 31-146
Cow position:
Alignm length: 117
Alignm identity: 97
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 32-146
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 32-156
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 32-157
Cow position:
Alignm length: 127
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 35-151
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 87

Conread position: 35-157
Cow position:
Alignm length: 124
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 36-147
Cow position:
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 36-147
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 36-148
Cow position:
Alignm length: 114
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 36-161
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 39-161
Cow position:
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 46-157
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 48-157
Cow position:
Alignm length: 110
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.