Cow genome map

Conread name: rfce17c_a1.y1

Conread position: 1-148
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 37

Conread position: 3-144
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 123, 28

Conread position: 4-157
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 34

Conread position: 6-157
Cow position:
Alignm length: 153
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 37

Conread position: 7-135
Cow position:
Alignm length: 130
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 7-157
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 7-157
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 8-148
Cow position:
Alignm length: 143
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 19, 11

Conread position: 8-157
Cow position:
Alignm length: 152
Alignm identity: 131
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 8-157
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 23

Conread position: 8-161
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 48, 23

Conread position: 9-144
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 9-161
Cow position:
Alignm length: 155
Alignm identity: 126
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 9-161
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 10

Conread position: 10-121
Cow position:
Alignm length: 115
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 10-138
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 113

Conread position: 10-147
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 27

Conread position: 10-156
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 10-157
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 13

Conread position: 10-161
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 36, 20

Conread position: 10-161
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 11-135
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 46, 14

Conread position: 11-148
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 11-156
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 11-156
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 11-157
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 14

Conread position: 11-157
Cow position:
Alignm length: 148
Alignm identity: 121
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 11-161
Cow position:
Alignm length: 152
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 135

Conread position: 12-127
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 12-156
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 12-156
Cow position:
Alignm length: 146
Alignm identity: 117
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 12-157
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 44, 13

Conread position: 12-161
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 13-157
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 13-157
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 24

Conread position: 13-157
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 13-161
Cow position:
Alignm length: 153
Alignm identity: 124
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 7

Conread position: 14-107
Cow position:
Alignm length: 97
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 14-157
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 76

Conread position: 14-161
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 38

Conread position: 15-157
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 107

Conread position: 17-147
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 21

Conread position: 17-147
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 21

Conread position: 19-129
Cow position:
Alignm length: 115
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 19-146
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 19-156
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 19-160
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 20-100
Cow position:
Alignm length: 83
Alignm identity: 76
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 20-125
Cow position:
Alignm length: 108
Alignm identity: 92
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 6, 90

Conread position: 20-125
Cow position:
Alignm length: 106
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 20-147
Cow position:
Alignm length: 130
Alignm identity: 106
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 13, 123

Conread position: 20-147
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 20-147
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 16

Conread position: 20-147
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 24

Conread position: 20-156
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 5, 109

Conread position: 20-156
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 20-157
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 81

Conread position: 20-159
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 20-161
Cow position:
Alignm length: 143
Alignm identity: 117
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 36, 103

Conread position: 20-161
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 20-161
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 135, 40

Conread position: 21-146
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 15

Conread position: 21-161
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 105, 40

Conread position: 23-157
Cow position:
Alignm length: 136
Alignm identity: 112
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 33, 118

Conread position: 23-157
Cow position:
Alignm length: 136
Alignm identity: 110
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 33, 79

Conread position: 23-157
Cow position:
Alignm length: 138
Alignm identity: 112
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 23-161
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 56

Conread position: 24-148
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 24-161
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 79

Conread position: 25-135
Cow position:
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 25-154
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 91

Conread position: 25-157
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 26-157
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 26-161
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 10

Conread position: 27-145
Cow position:
Alignm length: 120
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 27-155
Cow position:
Alignm length: 130
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 28-148
Cow position:
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 28-161
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 10

Conread position: 28-161
Cow position:
Alignm length: 135
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 29-161
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 27, 81

Conread position: 30-148
Cow position:
Alignm length: 120
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 30-156
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 67

Conread position: 31-156
Cow position:
Alignm length: 127
Alignm identity: 106
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 31-157
Cow position:
Alignm length: 129
Alignm identity: 106
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 31-157
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 80

Conread position: 32-148
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 32-156
Cow position:
Alignm length: 126
Alignm identity: 102
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 32-157
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 34-156
Cow position:
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 35-147
Cow position:
Alignm length: 114
Alignm identity: 94
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 35-157
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 40-146
Cow position:
Alignm length: 108
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 0

Show alignments to all cow chromosomes.