Cow genome map
| Conread name: | rfce17c_a1.y1 |
| Conread position: | 4-157 |
| Cow position: | chr26:33728396-33728550 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 4-161 |
| Cow position: | chr26:16797723-16797877 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 5-141 |
| Cow position: | chr26:12851942-12852080 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 5-148 |
| Cow position: | chr26:12027994-12028134 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 5-156 |
| Cow position: | chr26:4807801-4807649 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 6-121 |
| Cow position: | chr26:25190285-25190168 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 6-155 |
| Cow position: | chr26:31711822-31711972 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 6-157 |
| Cow position: | chr26:4854782-4854638 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 7-161 |
| Cow position: | chr26:28592-28741 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 49, 94 |
| Conread position: | 8-148 |
| Cow position: | chr26:15908521-15908661 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 48, 30 |
| Conread position: | 8-148 |
| Cow position: | chr26:23481009-23481148 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 16, 105 |
| Conread position: | 8-157 |
| Cow position: | chr26:5418288-5418428 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 48, 10 |
| Conread position: | 9-161 |
| Cow position: | chr26:830053-829895 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 10-133 |
| Cow position: | chr26:31205328-31205199 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 10-141 |
| Cow position: | chr26:5833173-5833044 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 10-148 |
| Cow position: | chr26:35449298-35449166 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 51 |
| Conread position: | 10-157 |
| Cow position: | chr26:5407218-5407073 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 54 |
| Conread position: | 10-157 |
| Cow position: | chr26:32518718-32518565 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 10-161 |
| Cow position: | chr26:16423830-16423682 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 11-147 |
| Cow position: | chr26:7190501-7190637 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 11-156 |
| Cow position: | chr26:32830319-32830175 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 11-161 |
| Cow position: | chr26:9661991-9662142 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 12-146 |
| Cow position: | chr26:6794384-6794255 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 54 |
| Conread position: | 12-147 |
| Cow position: | chr26:33837618-33837757 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 12-148 |
| Cow position: | chr26:23096958-23097091 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 12-148 |
| Cow position: | chr26:34026798-34026934 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 44, 8 |
| Conread position: | 12-157 |
| Cow position: | chr26:27482326-27482472 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 13-145 |
| Cow position: | chr26:32688790-32688656 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 13-145 |
| Cow position: | chr26:35530485-35530351 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 13-146 |
| Cow position: | chr26:19146137-19146004 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 13-156 |
| Cow position: | chr26:27768505-27768362 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 13-157 |
| Cow position: | chr26:4363535-4363394 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 13-157 |
| Cow position: | chr26:14293384-14293244 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 44, 7 |
| Conread position: | 13-157 |
| Cow position: | chr26:33475936-33475790 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 14-157 |
| Cow position: | chr26:1894147-1894286 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 42, 94 |
| Conread position: | 20-146 |
| Cow position: | chr26:10764443-10764317 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 114 |
| Conread position: | 20-147 |
| Cow position: | chr26:21418225-21418353 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 20-156 |
| Cow position: | chr26:25663320-25663457 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 20-156 |
| Cow position: | chr26:26919765-26919628 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 20-157 |
| Cow position: | chr26:8811360-8811221 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 20-160 |
| Cow position: | chr26:28202527-28202668 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 20-161 |
| Cow position: | chr26:21822819-21822955 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 37, 87 |
| Conread position: | 23-148 |
| Cow position: | chr26:9099308-9099429 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 33, 88 |
| Conread position: | 23-162 |
| Cow position: | chr26:10740018-10740163 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 13 |
| Conread position: | 24-161 |
| Cow position: | chr26:16166469-16166605 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 25-121 |
| Cow position: | chr26:9595876-9595973 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 25-145 |
| Cow position: | chr26:7148077-7148199 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 32, 115 |
| Conread position: | 25-147 |
| Cow position: | chr26:6714076-6714198 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 25-148 |
| Cow position: | chr26:21291563-21291691 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 28-148 |
| Cow position: | chr26:2930033-2930156 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 30-135 |
| Cow position: | chr26:15132859-15132753 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 30-157 |
| Cow position: | chr26:1041221-1041093 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 31-146 |
| Cow position: | chr26:35678066-35677946 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 31-157 |
| Cow position: | chr26:25029754-25029627 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 31-161 |
| Cow position: | chr26:31173490-31173359 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 32-146 |
| Cow position: | chr26:8811691-8811576 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 33-147 |
| Cow position: | chr26:34114480-34114366 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 23, 78 |
| Conread position: | 35-156 |
| Cow position: | chr26:4167136-4167259 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 36-144 |
| Cow position: | chr26:6741534-6741643 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 36-145 |
| Cow position: | chr26:11672513-11672403 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 53-156 |
| Cow position: | chr26:25300114-25300011 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 53-161 |
| Cow position: | chr26:28244026-28243919 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
Show alignments to all cow chromosomes.