Cow genome map

Conread name: rfce17c_a1.y1

Conread position: 4-157
Cow position:
Alignm length: 156
Alignm identity: 125
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 14

Conread position: 4-161
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 16

Conread position: 5-141
Cow position:
Alignm length: 139
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 5-148
Cow position:
Alignm length: 146
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 21, 32

Conread position: 5-156
Cow position:
Alignm length: 153
Alignm identity: 123
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 51, 0

Conread position: 6-121
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 6-155
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 6-157
Cow position:
Alignm length: 153
Alignm identity: 122
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 50, 18

Conread position: 7-161
Cow position:
Alignm length: 156
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 94

Conread position: 8-148
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 30

Conread position: 8-148
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 105

Conread position: 8-157
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 10

Conread position: 9-161
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 10-133
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 10-141
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 14

Conread position: 10-148
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 51

Conread position: 10-157
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 54

Conread position: 10-157
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 10-161
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 46, 21

Conread position: 11-147
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 25

Conread position: 11-156
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 45, 27

Conread position: 11-161
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 12-146
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 54

Conread position: 12-147
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 12-148
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 17

Conread position: 12-148
Cow position:
Alignm length: 138
Alignm identity: 113
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 8

Conread position: 12-157
Cow position:
Alignm length: 147
Alignm identity: 124
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 44, 0

Conread position: 13-145
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 13-145
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 13-146
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 11

Conread position: 13-156
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 49

Conread position: 13-157
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 57

Conread position: 13-157
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 7

Conread position: 13-157
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 14-157
Cow position:
Alignm length: 146
Alignm identity: 118
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 42, 94

Conread position: 20-146
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 36, 114

Conread position: 20-147
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 16

Conread position: 20-156
Cow position:
Alignm length: 138
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 20-156
Cow position:
Alignm length: 138
Alignm identity: 116
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 20-157
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 20-160
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 20-161
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 37, 87

Conread position: 23-148
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 88

Conread position: 23-162
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 13

Conread position: 24-161
Cow position:
Alignm length: 138
Alignm identity: 113
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 25-121
Cow position:
Alignm length: 98
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 25-145
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 115

Conread position: 25-147
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 31, 11

Conread position: 25-148
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 28-148
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 30-135
Cow position:
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 30-157
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 31-146
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 31-157
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 31-161
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 32-146
Cow position:
Alignm length: 116
Alignm identity: 97
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 33-147
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 78

Conread position: 35-156
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 36-144
Cow position:
Alignm length: 110
Alignm identity: 91
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 36-145
Cow position:
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 53-156
Cow position:
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 53-161
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 0

Show alignments to all cow chromosomes.