Cow genome map

Conread name: rfce17c_a1.y1

Conread position: 1-148
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 121

Conread position: 3-159
Cow position:
Alignm length: 158
Alignm identity: 130
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 7

Conread position: 3-161
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 5-134
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 51, 121

Conread position: 5-150
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 112

Conread position: 5-157
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 6-157
Cow position:
Alignm length: 156
Alignm identity: 125
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 96, 56

Conread position: 6-157
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 24

Conread position: 6-157
Cow position:
Alignm length: 154
Alignm identity: 123
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 6-161
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 24

Conread position: 7-146
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 12

Conread position: 8-125
Cow position:
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 10

Conread position: 8-148
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 12

Conread position: 9-114
Cow position:
Alignm length: 109
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 9-146
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 27

Conread position: 9-148
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 9-156
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 9-157
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 47, 27

Conread position: 9-160
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 102

Conread position: 10-106
Cow position:
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 10-107
Cow position:
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 10-129
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 10-133
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 10-145
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 80

Conread position: 10-146
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 9

Conread position: 10-146
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 10-146
Cow position:
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 10-147
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 26

Conread position: 10-147
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 13

Conread position: 10-156
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 20

Conread position: 10-157
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 47, 13

Conread position: 10-157
Cow position:
Alignm length: 148
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 10-157
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 100

Conread position: 10-157
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 14

Conread position: 10-157
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 16, 95

Conread position: 11-144
Cow position:
Alignm length: 135
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 26

Conread position: 11-146
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 11-147
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 25

Conread position: 11-148
Cow position:
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 11-148
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 124, 46

Conread position: 11-157
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 9

Conread position: 11-157
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 86

Conread position: 12-147
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 12-148
Cow position:
Alignm length: 140
Alignm identity: 117
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 12-148
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 12-156
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 12-157
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 26

Conread position: 12-157
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 24

Conread position: 13-144
Cow position:
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 70

Conread position: 13-146
Cow position:
Alignm length: 135
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 13-148
Cow position:
Alignm length: 138
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 34

Conread position: 13-148
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 108

Conread position: 13-155
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 28

Conread position: 13-156
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 125

Conread position: 13-157
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 89

Conread position: 14-156
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 15-156
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 15-157
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 39

Conread position: 15-161
Cow position:
Alignm length: 148
Alignm identity: 119
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 16-156
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 18-157
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 19-157
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 20-122
Cow position:
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 20-132
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 14

Conread position: 20-134
Cow position:
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 20-142
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 60

Conread position: 20-146
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 32

Conread position: 20-147
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 102

Conread position: 20-147
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 118

Conread position: 20-148
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 20-148
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 91

Conread position: 20-156
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 77

Conread position: 20-157
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 12, 79

Conread position: 20-157
Cow position:
Alignm length: 147
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 20-157
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 36, 17

Conread position: 20-157
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 51

Conread position: 20-157
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 36, 55

Conread position: 20-161
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 21-156
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 22-157
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 16

Conread position: 24-145
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 105

Conread position: 24-157
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 25-142
Cow position:
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 25-148
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 25-157
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 25-157
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 25-161
Cow position:
Alignm length: 138
Alignm identity: 113
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 25-161
Cow position:
Alignm length: 138
Alignm identity: 112
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 31, 86

Conread position: 26-147
Cow position:
Alignm length: 123
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 30, 10

Conread position: 27-144
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 80

Conread position: 27-156
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 30-135
Cow position:
Alignm length: 108
Alignm identity: 90
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 30-157
Cow position:
Alignm length: 129
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 90

Conread position: 30-160
Cow position:
Alignm length: 132
Alignm identity: 110
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 31-146
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 91

Conread position: 31-146
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 31-148
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 92

Conread position: 31-157
Cow position:
Alignm length: 128
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 31-161
Cow position:
Alignm length: 132
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 89

Conread position: 32-147
Cow position:
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 32-147
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 33-161
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 36-147
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 10

Conread position: 36-149
Cow position:
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 29

Conread position: 42-157
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 60

Conread position: 45-161
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 48-156
Cow position:
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 51-161
Cow position:
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Show alignments to all cow chromosomes.