Cow genome map

Conread name: rfce17c_a1.y1

Conread position: 1-156
Cow position: chr5:57086803-57086959 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 37

Conread position: 3-157
Cow position: chr5:7177407-7177254 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 17

Conread position: 4-144
Cow position: chr5:41755735-41755873 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 72

Conread position: 5-155
Cow position: chr5:12566289-12566438 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 89

Conread position: 6-145
Cow position: chr5:17253979-17254109 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 13

Conread position: 6-147
Cow position: chr5:13471361-13471221 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 50, 24

Conread position: 6-147
Cow position: chr5:57447413-57447553 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 32

Conread position: 6-157
Cow position: chr5:62011937-62011786 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 21, 57

Conread position: 7-135
Cow position: chr5:41757865-41757736 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 7-141
Cow position: chr5:52152856-52152990 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 29

Conread position: 7-147
Cow position: chr5:52853219-52853084 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 30

Conread position: 7-147
Cow position: chr5:63939804-63939949 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 7-156
Cow position: chr5:5760056-5760212 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 7-157
Cow position: chr5:12300163-12300014 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 76

Conread position: 7-157
Cow position: chr5:52001371-52001520 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 19, 55

Conread position: 7-159
Cow position: chr5:34347486-34347634 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 14

Conread position: 8-147
Cow position: chr5:42928361-42928499 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 22

Conread position: 8-148
Cow position: chr5:19972751-19972892 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 8-157
Cow position: chr5:25447138-25446988 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 29

Conread position: 8-157
Cow position: chr5:35235435-35235586 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 8, 31

Conread position: 8-157
Cow position: chr5:48061857-48062014 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 138

Conread position: 8-157
Cow position: chr5:51053398-51053546 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 24

Conread position: 8-157
Cow position: chr5:52125142-52125292 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 64

Conread position: 8-157
Cow position: chr5:53055310-53055458 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 14

Conread position: 9-143
Cow position: chr5:35246858-35246993 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 118
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 11

Conread position: 9-143
Cow position: chr5:47220741-47220607 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 27

Conread position: 9-161
Cow position: chr5:59662809-59662959 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 48, 29

Conread position: 10-108
Cow position: chr5:40167984-40167885 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 10-146
Cow position: chr5:40637549-40637412 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 10-147
Cow position: chr5:32672584-32672722 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 10-147
Cow position: chr5:40152736-40152598 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 10-148
Cow position: chr5:1122349-1122210 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 10-148
Cow position: chr5:11426987-11427123 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 10-152
Cow position: chr5:45337171-45337313 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 121
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 46, 122

Conread position: 10-155
Cow position: chr5:2240743-2240886 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 10

Conread position: 10-155
Cow position: chr5:56428328-56428469 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 46, 31

Conread position: 10-156
Cow position: chr5:45854750-45854601 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 10-156
Cow position: chr5:55965645-55965790 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 21

Conread position: 10-156
Cow position: chr5:60514775-60514925 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 10-157
Cow position: chr5:4280694-4280551 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 100

Conread position: 10-157
Cow position: chr5:18289362-18289225 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 10-157
Cow position: chr5:24464987-24464844 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 76

Conread position: 10-157
Cow position: chr5:36868987-36868838 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 10-157
Cow position: chr5:54751064-54750910 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 107

Conread position: 10-157
Cow position: chr5:56643319-56643170 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 26, 104

Conread position: 10-157
Cow position: chr5:60209902-60210040 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 10-161
Cow position: chr5:57399004-57399154 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 20

Conread position: 10-161
Cow position: chr5:58519168-58519317 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 11-118
Cow position: chr5:54375064-54374956 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 11-128
Cow position: chr5:42551818-42551698 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 11-140
Cow position: chr5:56578948-56578819 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 45, 20

Conread position: 11-143
Cow position: chr5:71579705-71579575 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 56

Conread position: 11-146
Cow position: chr5:1178202-1178068 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 94

Conread position: 11-146
Cow position: chr5:63241227-63241091 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 11-146
Cow position: chr5:64060693-64060560 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 25

Conread position: 11-148
Cow position: chr5:49821679-49821540 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 11-154
Cow position: chr5:43604386-43604245 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 25

Conread position: 11-155
Cow position: chr5:61049581-61049437 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 44, 24

Conread position: 11-157
Cow position: chr5:20127155-20127012 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 11-161
Cow position: chr5:15364518-15364367 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 25

Conread position: 11-163
Cow position: chr5:24108809-24108963 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 12-145
Cow position: chr5:43846130-43846264 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 27

Conread position: 12-148
Cow position: chr5:62544081-62543951 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 23

Conread position: 12-154
Cow position: chr5:56624267-56624411 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 123
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 0

Conread position: 12-157
Cow position: chr5:44868602-44868460 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 44, 91

Conread position: 12-157
Cow position: chr5:50101132-50101271 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 8

Conread position: 12-162
Cow position: chr5:43434754-43434906 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 129
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 10, 0

Conread position: 13-157
Cow position: chr5:19052546-19052689 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 10

Conread position: 13-157
Cow position: chr5:34193380-34193242 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 13-157
Cow position: chr5:40122364-40122507 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 28

Conread position: 13-157
Cow position: chr5:65140548-65140402 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 127

Conread position: 14-127
Cow position: chr5:18084221-18084333 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 11

Conread position: 14-148
Cow position: chr5:35208507-35208373 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 11

Conread position: 14-155
Cow position: chr5:19752544-19752407 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 17

Conread position: 14-156
Cow position: chr5:26149280-26149138 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 82

Conread position: 14-157
Cow position: chr5:48819522-48819371 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 15-157
Cow position: chr5:61914815-61914667 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 15-161
Cow position: chr5:57231874-57231733 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 92

Conread position: 16-147
Cow position: chr5:59517016-59517145 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 9

Conread position: 16-157
Cow position: chr5:39937363-39937218 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 17-163
Cow position: chr5:37572314-37572461 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 18-146
Cow position: chr5:54052998-54052871 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 13

Conread position: 18-157
Cow position: chr5:57526686-57526826 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 19-147
Cow position: chr5:57561866-57561740 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 18

Conread position: 19-148
Cow position: chr5:16185623-16185490 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 19-148
Cow position: chr5:42064446-42064317 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 37, 17

Conread position: 19-155
Cow position: chr5:2827615-2827478 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 42

Conread position: 19-155
Cow position: chr5:53779392-53779260 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 19-156
Cow position: chr5:2355758-2355625 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 44

Conread position: 19-161
Cow position: chr5:44196690-44196830 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 104

Conread position: 20-138
Cow position: chr5:44438473-44438591 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 112

Conread position: 20-142
Cow position: chr5:51012240-51012116 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 106
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 20-145
Cow position: chr5:52668279-52668152 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 20-147
Cow position: chr5:61593502-61593377 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 17

Conread position: 20-147
Cow position: chr5:72867291-72867163 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 20-148
Cow position: chr5:1678829-1678700 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 36, 111

Conread position: 20-148
Cow position: chr5:33273937-33273805 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 20-155
Cow position: chr5:32935994-32935848 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 20-156
Cow position: chr5:7057158-7057298 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 20-156
Cow position: chr5:17999257-17999392 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 36, 77

Conread position: 20-156
Cow position: chr5:65760294-65760431 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 125

Conread position: 20-157
Cow position: chr5:24915286-24915424 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 20-157
Cow position: chr5:43858180-43858317 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 36, 17

Conread position: 20-157
Cow position: chr5:54875455-54875591 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 16

Conread position: 20-161
Cow position: chr5:16937794-16937930 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 13, 90

Conread position: 20-161
Cow position: chr5:57755797-57755936 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 18

Conread position: 21-143
Cow position: chr5:39036019-39035895 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 10

Conread position: 21-147
Cow position: chr5:55749799-55749925 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 15

Conread position: 22-149
Cow position: chr5:32086786-32086915 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 22-155
Cow position: chr5:15413337-15413201 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 22-157
Cow position: chr5:58693-58830 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 22-161
Cow position: chr5:46063730-46063596 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 128, 20

Conread position: 23-121
Cow position: chr5:44312177-44312276 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 24-135
Cow position: chr5:8149074-8149182 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 87

Conread position: 24-157
Cow position: chr5:66972666-66972532 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 57

Conread position: 25-148
Cow position: chr5:21374883-21375002 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 12

Conread position: 25-156
Cow position: chr5:32975324-32975456 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 25-156
Cow position: chr5:40740093-40740225 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 12

Conread position: 25-156
Cow position: chr5:43611932-43611802 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 31, 12

Conread position: 25-157
Cow position: chr5:50703813-50703946 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 25-161
Cow position: chr5:33834274-33834139 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 102

Conread position: 25-161
Cow position: chr5:62996193-62996056 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 26-127
Cow position: chr5:17644115-17644217 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 26-127
Cow position: chr5:54427265-54427367 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 26-145
Cow position: chr5:46681490-46681605 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 26-157
Cow position: chr5:35459063-35459190 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 77

Conread position: 26-157
Cow position: chr5:43839764-43839896 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 26-161
Cow position: chr5:50723280-50723145 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 10

Conread position: 26-161
Cow position: chr5:57687348-57687483 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 10

Conread position: 27-135
Cow position: chr5:28719313-28719205 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 39

Conread position: 27-146
Cow position: chr5:20387387-20387267 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 27-161
Cow position: chr5:15770220-15770357 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 28-156
Cow position: chr5:54340997-54340870 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 28-161
Cow position: chr5:58487604-58487474 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 28, 87

Conread position: 29-145
Cow position: chr5:12562531-12562641 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 7

Conread position: 29-156
Cow position: chr5:17987663-17987791 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 29-157
Cow position: chr5:63763895-63763767 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 94

Conread position: 30-148
Cow position: chr5:20994860-20994974 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 41

Conread position: 30-156
Cow position: chr5:55783732-55783859 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 30-161
Cow position: chr5:11769501-11769368 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 31-146
Cow position: chr5:14550354-14550470 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 31-146
Cow position: chr5:56860671-56860556 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 65

Conread position: 31-157
Cow position: chr5:41935427-41935554 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 31-161
Cow position: chr5:2468985-2469113 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 31-161
Cow position: chr5:55956138-55956012 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 84

Conread position: 32-156
Cow position: chr5:12902146-12902021 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 33-129
Cow position: chr5:17026421-17026324 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 33-135
Cow position: chr5:3492411-3492309 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 31

Conread position: 33-145
Cow position: chr5:47870828-47870937 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 49

Conread position: 33-146
Cow position: chr5:30492565-30492680 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 33-146
Cow position: chr5:54712842-54712956 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 33-146
Cow position: chr5:59335999-59335884 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 33-155
Cow position: chr5:74690026-74690149 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 33-156
Cow position: chr5:55949452-55949575 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 84

Conread position: 35-144
Cow position: chr5:19561222-19561332 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 35-146
Cow position: chr5:54554961-54555073 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 36-156
Cow position: chr5:35228921-35229039 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 26

Conread position: 36-156
Cow position: chr5:44810014-44810135 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 36-157
Cow position: chr5:7012626-7012747 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 111

Conread position: 37-156
Cow position: chr5:71445614-71445494 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 37-157
Cow position: chr5:55756191-55756312 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 38-148
Cow position: chr5:44734506-44734613 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 71

Conread position: 42-161
Cow position: chr5:53947116-53946996 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 45-157
Cow position: chr5:53980538-53980651 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 0

Show alignments to all cow chromosomes.