Cow genome map

Conread name: rfce17c_a1.y1

Conread position: 1-157
Cow position: chr6:21475997-21475844 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 8, 64

Conread position: 3-145
Cow position: chr6:51019417-51019277 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 22

Conread position: 3-156
Cow position: chr6:22876662-22876813 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 18

Conread position: 4-141
Cow position: chr6:27074584-27074445 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 27, 39

Conread position: 4-157
Cow position: chr6:15058635-15058493 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 5-156
Cow position: chr6:44543880-44544031 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 124
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 118

Conread position: 5-157
Cow position: chr6:7539841-7539689 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 107

Conread position: 6-124
Cow position: chr6:9375158-9375279 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 14

Conread position: 6-156
Cow position: chr6:3952787-3952636 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 6-161
Cow position: chr6:15587327-15587482 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 17

Conread position: 6-161
Cow position: chr6:23381402-23381556 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 129
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 50, 16

Conread position: 7-147
Cow position: chr6:55196480-55196339 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 29

Conread position: 7-148
Cow position: chr6:18152653-18152518 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 7-156
Cow position: chr6:33510054-33509904 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 8-119
Cow position: chr6:28620364-28620252 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 27, 12

Conread position: 8-146
Cow position: chr6:55061134-55060990 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 30

Conread position: 8-148
Cow position: chr6:42035034-42034897 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 95

Conread position: 8-148
Cow position: chr6:54365073-54365206 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 8-156
Cow position: chr6:21052185-21052332 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 16

Conread position: 8-163
Cow position: chr6:65264287-65264435 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 89

Conread position: 9-161
Cow position: chr6:24776401-24776251 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 10-114
Cow position: chr6:16762367-16762470 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 90

Conread position: 10-121
Cow position: chr6:58636401-58636285 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 10-126
Cow position: chr6:26929181-26929298 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 10-144
Cow position: chr6:66259999-66259864 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 10-148
Cow position: chr6:16380808-16380670 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 19

Conread position: 10-148
Cow position: chr6:16700520-16700377 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 10-148
Cow position: chr6:54840239-54840382 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 20

Conread position: 10-156
Cow position: chr6:6201695-6201542 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 10-156
Cow position: chr6:54828060-54828205 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 19

Conread position: 10-157
Cow position: chr6:5095280-5095425 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 54

Conread position: 10-157
Cow position: chr6:5330675-5330529 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 44, 26

Conread position: 10-157
Cow position: chr6:10163936-10163782 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 10-157
Cow position: chr6:18440215-18440361 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 52

Conread position: 10-157
Cow position: chr6:18447252-18447401 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 10-157
Cow position: chr6:40032440-40032307 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 13

Conread position: 10-157
Cow position: chr6:53932581-53932730 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 126

Conread position: 10-157
Cow position: chr6:64432194-64432055 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 27

Conread position: 10-161
Cow position: chr6:59101058-59101209 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 50, 21

Conread position: 10-161
Cow position: chr6:62224683-62224534 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 112, 50

Conread position: 11-144
Cow position: chr6:28559801-28559668 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 111

Conread position: 11-145
Cow position: chr6:16016296-16016162 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 116
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 43, 127

Conread position: 11-148
Cow position: chr6:456691-456826 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 20

Conread position: 11-156
Cow position: chr6:47151079-47150937 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 103

Conread position: 11-157
Cow position: chr6:2585201-2585059 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 35

Conread position: 11-161
Cow position: chr6:10176038-10176189 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 12-141
Cow position: chr6:19681978-19681847 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 12-145
Cow position: chr6:19996880-19996742 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 121

Conread position: 12-146
Cow position: chr6:18608550-18608685 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 12-157
Cow position: chr6:14263629-14263774 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 118

Conread position: 12-157
Cow position: chr6:16411873-16411727 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 12-157
Cow position: chr6:30881066-30881212 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 25

Conread position: 12-157
Cow position: chr6:43345180-43345325 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 108

Conread position: 12-161
Cow position: chr6:8688591-8688734 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 24

Conread position: 12-161
Cow position: chr6:33302655-33302507 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 24

Conread position: 13-144
Cow position: chr6:8186929-8187060 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 23

Conread position: 13-146
Cow position: chr6:16387445-16387579 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 13-147
Cow position: chr6:31928898-31928763 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 115
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 13-157
Cow position: chr6:14152632-14152774 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 50

Conread position: 13-157
Cow position: chr6:42728905-42728762 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 64

Conread position: 14-140
Cow position: chr6:63251665-63251790 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 42, 10

Conread position: 14-144
Cow position: chr6:61883915-61884046 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 119

Conread position: 14-157
Cow position: chr6:16137510-16137654 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 22

Conread position: 14-157
Cow position: chr6:49824833-49824977 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 131

Conread position: 14-158
Cow position: chr6:47771990-47771846 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 136

Conread position: 15-145
Cow position: chr6:42483673-42483543 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 123

Conread position: 15-146
Cow position: chr6:26408248-26408377 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 16

Conread position: 15-146
Cow position: chr6:57467857-57467724 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 19-161
Cow position: chr6:67574641-67574500 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 37, 19

Conread position: 20-117
Cow position: chr6:12711540-12711638 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 20-129
Cow position: chr6:5757113-5757003 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 20-141
Cow position: chr6:24362044-24362165 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 16

Conread position: 20-144
Cow position: chr6:4469018-4468893 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 107
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 20-146
Cow position: chr6:17313990-17313861 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 20-146
Cow position: chr6:31846992-31847113 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 89

Conread position: 20-147
Cow position: chr6:48436082-48435957 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 108
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 51

Conread position: 20-148
Cow position: chr6:14150129-14150254 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 50

Conread position: 20-148
Cow position: chr6:33461632-33461509 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 83

Conread position: 20-148
Cow position: chr6:55044389-55044516 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 43

Conread position: 20-148
Cow position: chr6:59569740-59569612 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 83, 41

Conread position: 20-156
Cow position: chr6:16502790-16502928 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 20-156
Cow position: chr6:35181002-35181139 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 20-156
Cow position: chr6:36225361-36225226 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 16

Conread position: 20-157
Cow position: chr6:19045880-19045739 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 20-157
Cow position: chr6:21183971-21184108 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 36, 91

Conread position: 20-157
Cow position: chr6:28088794-28088931 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 78

Conread position: 20-157
Cow position: chr6:43906429-43906567 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 20-157
Cow position: chr6:66590324-66590191 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 84

Conread position: 20-157
Cow position: chr6:67187930-67187801 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 20-157
Cow position: chr6:67211674-67211808 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 41

Conread position: 20-157
Cow position: chr6:67810737-67810868 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 10

Conread position: 20-160
Cow position: chr6:24110537-24110395 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 122
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 6, 0

Conread position: 20-161
Cow position: chr6:6117396-6117532 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 38, 87

Conread position: 20-161
Cow position: chr6:21004930-21004789 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 36, 18

Conread position: 20-161
Cow position: chr6:58697377-58697519 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 20-161
Cow position: chr6:62805896-62805755 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 16

Conread position: 20-163
Cow position: chr6:62437670-62437525 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 21-148
Cow position: chr6:24536274-24536406 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 21-156
Cow position: chr6:12669349-12669213 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 122

Conread position: 21-156
Cow position: chr6:13565336-13565204 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 23

Conread position: 22-148
Cow position: chr6:29851618-29851494 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 101

Conread position: 22-156
Cow position: chr6:46558302-46558175 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 14

Conread position: 22-156
Cow position: chr6:65831612-65831478 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 14

Conread position: 23-115
Cow position: chr6:16316856-16316763 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 23-156
Cow position: chr6:8804294-8804437 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 23-157
Cow position: chr6:42567744-42567610 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 14

Conread position: 23-161
Cow position: chr6:49686069-49685930 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 117
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 33, 0

Conread position: 23-161
Cow position: chr6:66947571-66947709 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 89

Conread position: 25-141
Cow position: chr6:19936321-19936438 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 25-142
Cow position: chr6:24903329-24903446 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 11

Conread position: 25-146
Cow position: chr6:53138691-53138812 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 72

Conread position: 25-148
Cow position: chr6:34463343-34463462 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 83

Conread position: 25-148
Cow position: chr6:62724805-62724681 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 25-157
Cow position: chr6:17404809-17404675 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 11

Conread position: 25-157
Cow position: chr6:34076410-34076283 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 78

Conread position: 25-157
Cow position: chr6:50771114-50771246 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 25-161
Cow position: chr6:4760241-4760104 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 80

Conread position: 25-161
Cow position: chr6:15937605-15937742 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 25-161
Cow position: chr6:23058461-23058324 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 26-141
Cow position: chr6:48449061-48448948 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 26-148
Cow position: chr6:28148509-28148381 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 10

Conread position: 26-161
Cow position: chr6:45159809-45159945 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 27-148
Cow position: chr6:10399663-10399789 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 27-148
Cow position: chr6:17244025-17243906 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 27-148
Cow position: chr6:30688267-30688386 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 9

Conread position: 27-157
Cow position: chr6:20219534-20219658 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 28-132
Cow position: chr6:28561924-28562029 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 28-147
Cow position: chr6:16738859-16738739 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 31-148
Cow position: chr6:66434195-66434077 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 31-161
Cow position: chr6:11247009-11246880 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 86

Conread position: 31-161
Cow position: chr6:50444874-50445005 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 31-161
Cow position: chr6:50682058-50682189 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 32-146
Cow position: chr6:8369664-8369549 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 32-148
Cow position: chr6:41147459-41147345 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 32-157
Cow position: chr6:10039966-10039840 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 32-157
Cow position: chr6:19563239-19563367 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 32-161
Cow position: chr6:15243078-15242949 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 5

Conread position: 33-147
Cow position: chr6:26764583-26764701 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 33-156
Cow position: chr6:13742226-13742103 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 95

Conread position: 33-157
Cow position: chr6:5445907-5445783 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 19, 95

Conread position: 33-157
Cow position: chr6:35984895-35985020 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 34-151
Cow position: chr6:11894768-11894884 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 13

Conread position: 36-146
Cow position: chr6:57079662-57079551 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 36-161
Cow position: chr6:54821070-54820944 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 38-144
Cow position: chr6:36267234-36267126 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 42-157
Cow position: chr6:48379381-48379497 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 45-157
Cow position: chr6:61644629-61644742 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 48-147
Cow position: chr6:61681302-61681204 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 8, 79

Conread position: 53-157
Cow position: chr6:19696027-19695923 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 55-156
Cow position: chr6:35842876-35842776 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 82, 0

Show alignments to all cow chromosomes.