Cow genome map
| Conread name: | rfce17c_a1.y1 |
| Conread position: | 1-157 |
| Cow position: | chr9:6839795-6839945 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-157 |
| Cow position: | chr9:13993562-13993717 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 56, 29 |
| Conread position: | 1-157 |
| Cow position: | chr9:63707846-63707998 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 53, 70 |
| Conread position: | 2-148 |
| Cow position: | chr9:55173841-55173694 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 2-157 |
| Cow position: | chr9:26477011-26477168 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-157 |
| Cow position: | chr9:63710959-63711113 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 7 |
| Conread position: | 3-146 |
| Cow position: | chr9:28866292-28866149 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 53, 22 |
| Conread position: | 4-121 |
| Cow position: | chr9:16147001-16147124 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 4-145 |
| Cow position: | chr9:29091574-29091713 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 4-161 |
| Cow position: | chr9:52689815-52689655 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 5-145 |
| Cow position: | chr9:34964931-34964795 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 6-141 |
| Cow position: | chr9:11216372-11216238 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 96 |
| Conread position: | 6-146 |
| Cow position: | chr9:34697499-34697358 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 6-148 |
| Cow position: | chr9:50977451-50977310 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 6-161 |
| Cow position: | chr9:35295498-35295646 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 50, 89 |
| Conread position: | 7-147 |
| Cow position: | chr9:37951095-37950955 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 7-147 |
| Cow position: | chr9:47510764-47510625 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 8-125 |
| Cow position: | chr9:41995559-41995675 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 8-144 |
| Cow position: | chr9:9724074-9723937 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 7, 31 |
| Conread position: | 8-146 |
| Cow position: | chr9:6954448-6954309 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 8-148 |
| Cow position: | chr9:41644950-41644807 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 8-157 |
| Cow position: | chr9:20828708-20828858 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 8-157 |
| Cow position: | chr9:35049286-35049432 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 8-157 |
| Cow position: | chr9:35466713-35466570 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 134, 10 |
| Conread position: | 8-161 |
| Cow position: | chr9:35933014-35932858 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 19, 91 |
| Conread position: | 8-163 |
| Cow position: | chr9:9091302-9091147 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 48, 12 |
| Conread position: | 9-127 |
| Cow position: | chr9:38792820-38792940 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 9-147 |
| Cow position: | chr9:32662230-32662089 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 9-148 |
| Cow position: | chr9:18425720-18425855 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 9-156 |
| Cow position: | chr9:28315227-28315380 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 9-156 |
| Cow position: | chr9:61019557-61019411 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 9-161 |
| Cow position: | chr9:5772874-5772721 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 10-141 |
| Cow position: | chr9:42043927-42043794 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 10-148 |
| Cow position: | chr9:6687501-6687641 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 10-151 |
| Cow position: | chr9:60138604-60138741 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 46, 55 |
| Conread position: | 10-157 |
| Cow position: | chr9:3946339-3946196 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 46, 91 |
| Conread position: | 10-157 |
| Cow position: | chr9:40221377-40221234 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 98 |
| Conread position: | 10-157 |
| Cow position: | chr9:45170576-45170429 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 10-161 |
| Cow position: | chr9:19657164-19657020 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 19 |
| Conread position: | 11-126 |
| Cow position: | chr9:48808954-48809070 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 11-127 |
| Cow position: | chr9:39135810-39135697 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 11-147 |
| Cow position: | chr9:28156508-28156645 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 11-147 |
| Cow position: | chr9:44396469-44396604 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 11-156 |
| Cow position: | chr9:38941628-38941481 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 12-127 |
| Cow position: | chr9:35043262-35043145 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 12-142 |
| Cow position: | chr9:6446913-6447045 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 52 |
| Conread position: | 12-146 |
| Cow position: | chr9:13722329-13722197 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 44, 19 |
| Conread position: | 12-147 |
| Cow position: | chr9:58232516-58232379 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 12-148 |
| Cow position: | chr9:16770799-16770944 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 12-148 |
| Cow position: | chr9:55013534-55013393 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 12-157 |
| Cow position: | chr9:20394506-20394363 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 98 |
| Conread position: | 12-157 |
| Cow position: | chr9:44822513-44822372 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 42, 95 |
| Conread position: | 12-161 |
| Cow position: | chr9:7611979-7611835 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 79 |
| Conread position: | 13-131 |
| Cow position: | chr9:19743785-19743904 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 13-135 |
| Cow position: | chr9:34286605-34286729 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 24, 100 |
| Conread position: | 13-145 |
| Cow position: | chr9:1884331-1884190 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 13-146 |
| Cow position: | chr9:39709666-39709798 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 44, 22 |
| Conread position: | 13-156 |
| Cow position: | chr9:39148892-39149030 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 94 |
| Conread position: | 13-157 |
| Cow position: | chr9:8992369-8992227 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 43, 89 |
| Conread position: | 13-157 |
| Cow position: | chr9:16216789-16216931 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 14-156 |
| Cow position: | chr9:31344801-31344656 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 14-161 |
| Cow position: | chr9:36457807-36457955 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 14-163 |
| Cow position: | chr9:31215891-31216038 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 15-163 |
| Cow position: | chr9:26057618-26057472 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 57 |
| Conread position: | 16-144 |
| Cow position: | chr9:53123899-53124028 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 18-145 |
| Cow position: | chr9:52510927-52511059 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 18-157 |
| Cow position: | chr9:26578396-26578250 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 18-157 |
| Cow position: | chr9:52130828-52130967 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 39, 7 |
| Conread position: | 19-146 |
| Cow position: | chr9:59173129-59172999 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 19-157 |
| Cow position: | chr9:5068654-5068793 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 19-157 |
| Cow position: | chr9:15806110-15805971 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 19-157 |
| Cow position: | chr9:30402614-30402473 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 19-161 |
| Cow position: | chr9:48367712-48367570 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 20-121 |
| Cow position: | chr9:44314892-44314789 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 20-127 |
| Cow position: | chr9:38962245-38962138 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 60 |
| Conread position: | 20-146 |
| Cow position: | chr9:6726864-6726991 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 20-146 |
| Cow position: | chr9:13744117-13743989 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 20-147 |
| Cow position: | chr9:38370293-38370419 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 99 |
| Conread position: | 20-148 |
| Cow position: | chr9:54640000-54639875 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 98 |
| Conread position: | 20-148 |
| Cow position: | chr9:54677072-54677207 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 20-155 |
| Cow position: | chr9:8645082-8645216 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 20-155 |
| Cow position: | chr9:9431880-9432013 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 20-156 |
| Cow position: | chr9:17785751-17785615 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 18 |
| Conread position: | 20-156 |
| Cow position: | chr9:35028350-35028214 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 36, 100 |
| Conread position: | 20-156 |
| Cow position: | chr9:44526926-44527069 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 20-157 |
| Cow position: | chr9:32019510-32019372 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 20-157 |
| Cow position: | chr9:34760549-34760412 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 35, 95 |
| Conread position: | 20-157 |
| Cow position: | chr9:60741366-60741232 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 20-161 |
| Cow position: | chr9:26715070-26715212 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 111 |
| Conread position: | 20-161 |
| Cow position: | chr9:31625947-31626090 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 22-157 |
| Cow position: | chr9:17769142-17769270 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 22-161 |
| Cow position: | chr9:28718536-28718668 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 34, 69 |
| Conread position: | 23-107 |
| Cow position: | chr9:56324278-56324363 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 76 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 23-108 |
| Cow position: | chr9:35932789-35932703 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 78 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 23-148 |
| Cow position: | chr9:63185877-63185752 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 94 |
| Conread position: | 23-157 |
| Cow position: | chr9:15215869-15215735 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 23-157 |
| Cow position: | chr9:34875352-34875211 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 23-161 |
| Cow position: | chr9:8901409-8901271 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 107 |
| Conread position: | 23-161 |
| Cow position: | chr9:20755939-20755800 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 25-141 |
| Cow position: | chr9:8537129-8537245 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 25-144 |
| Cow position: | chr9:5399285-5399405 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 25-145 |
| Cow position: | chr9:8613391-8613272 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 25-146 |
| Cow position: | chr9:14738074-14738190 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 78 |
| Conread position: | 25-148 |
| Cow position: | chr9:22447471-22447351 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 25-155 |
| Cow position: | chr9:53323964-53323834 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 25-156 |
| Cow position: | chr9:8467881-8468010 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 40 |
| Conread position: | 25-156 |
| Cow position: | chr9:53632104-53631972 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 25-156 |
| Cow position: | chr9:58440561-58440424 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 25-157 |
| Cow position: | chr9:11123658-11123531 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 25-157 |
| Cow position: | chr9:34423441-34423573 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 25-157 |
| Cow position: | chr9:41416152-41416285 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 25-161 |
| Cow position: | chr9:3573286-3573423 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 25-161 |
| Cow position: | chr9:12280795-12280927 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 82 |
| Conread position: | 25-161 |
| Cow position: | chr9:27279129-27279265 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 26-147 |
| Cow position: | chr9:5110679-5110800 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 96 |
| Conread position: | 26-149 |
| Cow position: | chr9:11447984-11447862 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 91 |
| Conread position: | 26-154 |
| Cow position: | chr9:34279235-34279106 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 26-157 |
| Cow position: | chr9:38624801-38624672 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 27-155 |
| Cow position: | chr9:55284516-55284392 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 27-157 |
| Cow position: | chr9:63785085-63784962 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 70 |
| Conread position: | 28-148 |
| Cow position: | chr9:36634329-36634450 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 30-157 |
| Cow position: | chr9:16826375-16826243 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 30-157 |
| Cow position: | chr9:26102559-26102686 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 108 |
| Conread position: | 31-157 |
| Cow position: | chr9:41282840-41282967 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 31-161 |
| Cow position: | chr9:12786648-12786517 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 32-146 |
| Cow position: | chr9:52651663-52651548 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 32-147 |
| Cow position: | chr9:20355697-20355811 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 100 |
| Conread position: | 32-156 |
| Cow position: | chr9:2984897-2985022 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 32-157 |
| Cow position: | chr9:52755023-52754898 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 96 |
| Conread position: | 32-157 |
| Cow position: | chr9:54986332-54986206 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 33-137 |
| Cow position: | chr9:35491261-35491367 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 33-157 |
| Cow position: | chr9:901611-901487 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 33-157 |
| Cow position: | chr9:48017937-48017812 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 33-157 |
| Cow position: | chr9:51566668-51566543 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 33-161 |
| Cow position: | chr9:25583661-25583786 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 34 |
| Conread position: | 36-145 |
| Cow position: | chr9:63169802-63169912 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 20, 103 |
| Conread position: | 37-161 |
| Cow position: | chr9:34362570-34362694 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 19, 85 |
| Conread position: | 44-163 |
| Cow position: | chr9:37955333-37955213 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 45-155 |
| Cow position: | chr9:28342813-28342701 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 45-157 |
| Cow position: | chr9:10010654-10010767 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 47-161 |
| Cow position: | chr9:47214705-47214589 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 83 |
| Conread position: | 48-146 |
| Cow position: | chr9:31514090-31513991 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 54-148 |
| Cow position: | chr9:10133188-10133094 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.