Cow genome map

Conread name: rfce17c_a1.y1

Conread position: 1-157
Cow position:
Alignm length: 157
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 1-157
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 29

Conread position: 1-157
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 53, 70

Conread position: 2-148
Cow position:
Alignm length: 148
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 2-157
Cow position:
Alignm length: 158
Alignm identity: 130
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 54, 0

Conread position: 2-157
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 7

Conread position: 3-146
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 22

Conread position: 4-121
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 4-145
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 19

Conread position: 4-161
Cow position:
Alignm length: 161
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 5-145
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 6-141
Cow position:
Alignm length: 137
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 96

Conread position: 6-146
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 6-148
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 50, 18

Conread position: 6-161
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 89

Conread position: 7-147
Cow position:
Alignm length: 142
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 49, 29

Conread position: 7-147
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 49, 13

Conread position: 8-125
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 21

Conread position: 8-144
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 7, 31

Conread position: 8-146
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 8-148
Cow position:
Alignm length: 144
Alignm identity: 120
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 8-157
Cow position:
Alignm length: 152
Alignm identity: 129
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 13, 55

Conread position: 8-157
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 15

Conread position: 8-157
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 134, 10

Conread position: 8-161
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 91

Conread position: 8-163
Cow position:
Alignm length: 157
Alignm identity: 125
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 48, 12

Conread position: 9-127
Cow position:
Alignm length: 121
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 9-147
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 9-148
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 21

Conread position: 9-156
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 9-156
Cow position:
Alignm length: 149
Alignm identity: 122
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 46, 21

Conread position: 9-161
Cow position:
Alignm length: 154
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 10-141
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 10-148
Cow position:
Alignm length: 141
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 10-151
Cow position:
Alignm length: 143
Alignm identity: 118
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 46, 55

Conread position: 10-157
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 46, 91

Conread position: 10-157
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 98

Conread position: 10-157
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 9

Conread position: 10-161
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 19

Conread position: 11-126
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 14, 77

Conread position: 11-127
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 11-147
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 11-147
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 27

Conread position: 11-156
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 20

Conread position: 12-127
Cow position:
Alignm length: 118
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 12-142
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 52

Conread position: 12-146
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 19

Conread position: 12-147
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 12-148
Cow position:
Alignm length: 146
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 12-148
Cow position:
Alignm length: 142
Alignm identity: 118
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 12-157
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 98

Conread position: 12-157
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 42, 95

Conread position: 12-161
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 79

Conread position: 13-131
Cow position:
Alignm length: 120
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 13-135
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 24, 100

Conread position: 13-145
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 13-146
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 22

Conread position: 13-156
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 94

Conread position: 13-157
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 89

Conread position: 13-157
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 44, 17

Conread position: 14-156
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 14-161
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 14-163
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 11

Conread position: 15-163
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 57

Conread position: 16-144
Cow position:
Alignm length: 130
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 18-145
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 18-157
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 18-157
Cow position:
Alignm length: 141
Alignm identity: 114
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 39, 7

Conread position: 19-146
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 19-157
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 11

Conread position: 19-157
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 19-157
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 19-161
Cow position:
Alignm length: 144
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 17

Conread position: 20-121
Cow position:
Alignm length: 104
Alignm identity: 86
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 20-127
Cow position:
Alignm length: 109
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 60

Conread position: 20-146
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 20-146
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 20-147
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 99

Conread position: 20-148
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 98

Conread position: 20-148
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 20-155
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 20-155
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 16

Conread position: 20-156
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 18

Conread position: 20-156
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 100

Conread position: 20-156
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 20-157
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 95

Conread position: 20-157
Cow position:
Alignm length: 140
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 84

Conread position: 20-161
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 111

Conread position: 20-161
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 22-157
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 15

Conread position: 22-161
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 69

Conread position: 23-107
Cow position:
Alignm length: 86
Alignm identity: 76
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 23-108
Cow position:
Alignm length: 87
Alignm identity: 78
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 23-148
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 94

Conread position: 23-157
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 12

Conread position: 23-157
Cow position:
Alignm length: 142
Alignm identity: 115
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 23-161
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 107

Conread position: 23-161
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 25-141
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 11

Conread position: 25-144
Cow position:
Alignm length: 122
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 11

Conread position: 25-145
Cow position:
Alignm length: 122
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 46

Conread position: 25-146
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 78

Conread position: 25-148
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 29, 12

Conread position: 25-155
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 13

Conread position: 25-156
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 40

Conread position: 25-156
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 25-156
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 62

Conread position: 25-157
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 84

Conread position: 25-157
Cow position:
Alignm length: 134
Alignm identity: 113
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 11

Conread position: 25-157
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 25-161
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 25-161
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 82

Conread position: 25-161
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 11

Conread position: 26-147
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 96

Conread position: 26-149
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 91

Conread position: 26-154
Cow position:
Alignm length: 131
Alignm identity: 110
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 30, 11

Conread position: 26-157
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 27-155
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 10

Conread position: 27-157
Cow position:
Alignm length: 132
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 70

Conread position: 28-148
Cow position:
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 30-157
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 30-157
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 108

Conread position: 31-157
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 31-161
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 32-146
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 32-147
Cow position:
Alignm length: 117
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 100

Conread position: 32-156
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 32-157
Cow position:
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 96

Conread position: 32-157
Cow position:
Alignm length: 127
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 33-137
Cow position:
Alignm length: 107
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 33-157
Cow position:
Alignm length: 126
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 16

Conread position: 33-157
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 33-157
Cow position:
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 33-161
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 34

Conread position: 36-145
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 20, 103

Conread position: 37-161
Cow position:
Alignm length: 126
Alignm identity: 97
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 19, 85

Conread position: 44-163
Cow position:
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 45-155
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 45-157
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 47-161
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 83

Conread position: 48-146
Cow position:
Alignm length: 100
Alignm identity: 82
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 54-148
Cow position:
Alignm length: 95
Alignm identity: 80
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.