Cow genome map
| Conread name: | rfhi4017b_k6.y1 |
| Conread position: | 303-488 |
| Cow position: | chr11:34266076-34265888 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 5 |
| Conread position: | 327-488 |
| Cow position: | chr11:30660915-30660754 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 48 |
| Conread position: | 346-470 |
| Cow position: | chr11:34025132-34025015 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 61, 13 |
| Conread position: | 348-486 |
| Cow position: | chr11:64101654-64101516 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 17, 34 |
| Conread position: | 357-488 |
| Cow position: | chr11:44064481-44064348 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 360-482 |
| Cow position: | chr11:73007457-73007334 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 360-488 |
| Cow position: | chr11:25972355-25972483 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 361-488 |
| Cow position: | chr11:16363806-16363930 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 361-488 |
| Cow position: | chr11:25807148-25807274 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 362-488 |
| Cow position: | chr11:21909546-21909671 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 363-487 |
| Cow position: | chr11:55120054-55119931 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 363-488 |
| Cow position: | chr11:74171031-74171151 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 364-488 |
| Cow position: | chr11:2813429-2813304 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 364-488 |
| Cow position: | chr11:54204243-54204365 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 364-488 |
| Cow position: | chr11:80780709-80780586 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 381-482 |
| Cow position: | chr11:52860215-52860114 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 76 |
| Conread position: | 381-485 |
| Cow position: | chr11:85006000-85005895 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-486 |
| Cow position: | chr11:69491980-69491878 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 381-488 |
| Cow position: | chr11:27816949-27817054 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 381-488 |
| Cow position: | chr11:34398050-34397943 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 26, 97 |
| Conread position: | 381-488 |
| Cow position: | chr11:53331353-53331244 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 382-482 |
| Cow position: | chr11:22851608-22851510 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 382-485 |
| Cow position: | chr11:53754996-53755100 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 382-488 |
| Cow position: | chr11:3261277-3261173 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 93 |
| Conread position: | 382-488 |
| Cow position: | chr11:65777199-65777306 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 383-488 |
| Cow position: | chr11:18452585-18452688 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 383-488 |
| Cow position: | chr11:77772132-77772235 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 385-488 |
| Cow position: | chr11:34304030-34303928 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 385-488 |
| Cow position: | chr11:77762955-77763061 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 26 |
| Conread position: | 387-488 |
| Cow position: | chr11:15885862-15885760 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 388-488 |
| Cow position: | chr11:12791327-12791227 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 389-472 |
| Cow position: | chr11:53270545-53270629 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 76 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 411-488 |
| Cow position: | chr11:8087623-8087700 (view UCSC Genome Browser custom track) |
| Alignm length: | 78 |
| Alignm identity: | 72 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.