Cow genome map
| Conread name: | rfhi4017b_k6.y1 |
| Conread position: | 343-488 |
| Cow position: | chr16:52649896-52650043 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 16, 45 |
| Conread position: | 350-488 |
| Cow position: | chr16:2722430-2722567 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 356-487 |
| Cow position: | chr16:30572017-30572147 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 359-464 |
| Cow position: | chr16:7086176-7086281 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 360-487 |
| Cow position: | chr16:24038701-24038575 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 361-481 |
| Cow position: | chr16:17218857-17218978 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 94 |
| Conread position: | 361-482 |
| Cow position: | chr16:37024651-37024768 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 361-488 |
| Cow position: | chr16:10198591-10198467 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 361-488 |
| Cow position: | chr16:16119063-16118936 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 361-488 |
| Cow position: | chr16:32352719-32352592 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 362-488 |
| Cow position: | chr16:12242950-12243076 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 19 |
| Conread position: | 364-488 |
| Cow position: | chr16:14084550-14084674 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 364-488 |
| Cow position: | chr16:14444773-14444651 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 374-479 |
| Cow position: | chr16:26106741-26106636 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 378-482 |
| Cow position: | chr16:38397751-38397855 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 381-476 |
| Cow position: | chr16:56373298-56373394 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-482 |
| Cow position: | chr16:14799156-14799254 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 381-487 |
| Cow position: | chr16:14824398-14824504 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 76 |
| Conread position: | 381-488 |
| Cow position: | chr16:13044431-13044323 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chr16:22785460-22785568 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 381-488 |
| Cow position: | chr16:27075746-27075636 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chr16:31374321-31374430 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 381-488 |
| Cow position: | chr16:43849936-43850044 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chr16:45057994-45057889 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 79, 24 |
| Conread position: | 381-488 |
| Cow position: | chr16:47781887-47781778 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 381-488 |
| Cow position: | chr16:48894241-48894349 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 382-488 |
| Cow position: | chr16:53516064-53516170 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 383-488 |
| Cow position: | chr16:37508663-37508559 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 383-488 |
| Cow position: | chr16:41680178-41680285 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 383-488 |
| Cow position: | chr16:43850246-43850352 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 397-488 |
| Cow position: | chr16:15509499-15509408 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 10, 80 |
Show alignments to all cow chromosomes.