Cow genome map
| Conread name: | rfhi4017b_k6.y1 |
| Conread position: | 350-488 |
| Cow position: | chr3:45735768-45735625 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 355-488 |
| Cow position: | chr3:8754038-8753905 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 361-488 |
| Cow position: | chr3:5317185-5317311 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 364-488 |
| Cow position: | chr3:73154521-73154401 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 381-476 |
| Cow position: | chr3:49414193-49414289 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-482 |
| Cow position: | chr3:23478789-23478686 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 381-482 |
| Cow position: | chr3:52817560-52817458 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-486 |
| Cow position: | chr3:22054078-22054184 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-487 |
| Cow position: | chr3:15091424-15091317 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chr3:1339460-1339352 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chr3:23274413-23274519 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 91 |
| Conread position: | 381-488 |
| Cow position: | chr3:24532380-24532271 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chr3:27346805-27346909 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 381-488 |
| Cow position: | chr3:27633446-27633554 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chr3:34165095-34165199 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chr3:43004244-43004352 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 381-488 |
| Cow position: | chr3:68127645-68127537 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chr3:74723880-74723988 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chr3:77589942-77589834 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 382-487 |
| Cow position: | chr3:45642050-45641944 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 383-485 |
| Cow position: | chr3:26581514-26581618 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 383-488 |
| Cow position: | chr3:2285242-2285137 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 383-488 |
| Cow position: | chr3:78442330-78442435 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 94 |
| Conread position: | 387-487 |
| Cow position: | chr3:32773748-32773647 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 387-487 |
| Cow position: | chr3:77158947-77158846 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 387-488 |
| Cow position: | chr3:60947642-60947747 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 388-482 |
| Cow position: | chr3:69147991-69148086 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
Show alignments to all cow chromosomes.