Cow genome map
| Conread name: | rfhi4017b_k6.y1 |
| Conread position: | 308-488 |
| Cow position: | chr6:24337375-24337557 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 32, 75 |
| Conread position: | 325-474 |
| Cow position: | chr6:31687519-31687664 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 336-488 |
| Cow position: | chr6:28008787-28008940 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 48 |
| Conread position: | 343-484 |
| Cow position: | chr6:64541879-64541741 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 35 |
| Conread position: | 343-488 |
| Cow position: | chr6:3018126-3017984 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 350-485 |
| Cow position: | chr6:16494959-16495094 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 31 |
| Conread position: | 355-488 |
| Cow position: | chr6:53416310-53416441 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 361-488 |
| Cow position: | chr6:14161977-14162104 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 361-488 |
| Cow position: | chr6:34557152-34557025 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 361-488 |
| Cow position: | chr6:41558123-41557998 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 19 |
| Conread position: | 364-488 |
| Cow position: | chr6:35697779-35697903 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 380-487 |
| Cow position: | chr6:24260185-24260292 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 381-469 |
| Cow position: | chr6:44389626-44389715 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chr6:4665885-4665990 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 60 |
| Conread position: | 381-488 |
| Cow position: | chr6:6244122-6244226 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 381-488 |
| Cow position: | chr6:6635763-6635659 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 381-488 |
| Cow position: | chr6:13092452-13092560 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chr6:14280282-14280174 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chr6:23892175-23892067 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chr6:24496306-24496414 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chr6:35126491-35126597 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 28, 74 |
| Conread position: | 381-488 |
| Cow position: | chr6:50502213-50502109 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 14 |
| Conread position: | 382-488 |
| Cow position: | chr6:3936004-3936111 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 382-488 |
| Cow position: | chr6:5678417-5678522 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 27, 69 |
| Conread position: | 382-488 |
| Cow position: | chr6:11159373-11159479 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 25, 74 |
| Conread position: | 383-480 |
| Cow position: | chr6:62082912-62082816 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 383-488 |
| Cow position: | chr6:30287166-30287060 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 386-482 |
| Cow position: | chr6:55398414-55398317 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 396-487 |
| Cow position: | chr6:37085500-37085411 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 72 |
Show alignments to all cow chromosomes.