Cow genome map
| Conread name: | rfhi4017b_k6.y1 |
| Conread position: | 339-487 |
| Cow position: | chrX:4590600-4590454 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 34 |
| Conread position: | 346-488 |
| Cow position: | chrX:6672426-6672284 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 348-488 |
| Cow position: | chrX:18699716-18699854 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 351-488 |
| Cow position: | chrX:19391631-19391767 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 353-488 |
| Cow position: | chrX:35552977-35552850 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 20 |
| Conread position: | 355-488 |
| Cow position: | chrX:4625551-4625419 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 358-487 |
| Cow position: | chrX:19216289-19216417 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 361-487 |
| Cow position: | chrX:37981013-37980891 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 364-487 |
| Cow position: | chrX:6472339-6472217 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 381-480 |
| Cow position: | chrX:4440464-4440366 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 36 |
| Conread position: | 381-482 |
| Cow position: | chrX:502950-503052 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-487 |
| Cow position: | chrX:1427887-1427781 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 381-487 |
| Cow position: | chrX:37236615-37236508 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chrX:1330185-1330293 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chrX:4019308-4019416 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chrX:9910145-9910253 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chrX:18518649-18518541 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chrX:24286669-24286565 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 381-488 |
| Cow position: | chrX:25453785-25453677 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 381-488 |
| Cow position: | chrX:37749270-37749162 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 382-488 |
| Cow position: | chrX:12688464-12688567 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 382-488 |
| Cow position: | chrX:20505317-20505211 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 382-488 |
| Cow position: | chrX:25653697-25653590 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 384-488 |
| Cow position: | chrX:30729173-30729278 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
Show alignments to all cow chromosomes.