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Cow genome map

           
Conread name:
           
rfhi4020b_c9.y1
        

               
Conread position:
               
1-108
               

               
Cow position:
               
chr2:14089794-14089901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-113
               

               
Cow position:
               
chr2:58035108-58035220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-114
               

               
Cow position:
               
chr2:549326-549216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-121
               

               
Cow position:
               
chr2:17114727-17114608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
1-121
               

               
Cow position:
               
chr2:17444797-17444918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 102
               

               
Conread position:
               
1-123
               

               
Cow position:
               
chr2:38362364-38362243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-123
               

               
Cow position:
               
chr2:40466636-40466758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-124
               

               
Cow position:
               
chr2:7573503-7573381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-124
               

               
Cow position:
               
chr2:39584450-39584572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1-124
               

               
Cow position:
               
chr2:54810851-54810732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-124
               

               
Cow position:
               
chr2:54971177-54971303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr2:39501033-39501165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr2:41185055-41185186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr2:63074851-63074729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr2:70704259-70704384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr2:82580927-82580803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr2:44222825-44222951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr2:69747615-69747489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr2:43624533-43624405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 29
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr2:57733435-57733562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
99, 111
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr2:39334872-39334737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr2:40880072-40880203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr2:40403026-40402890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr2:85339457-85339318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 110
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr2:39798243-39798387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr2:47139079-47139223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr2:44217907-44217756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
117, 18
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr2:40257411-40257256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr2:82139114-82138966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr2:24434279-24434112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr2:43790101-43790266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr2:47624405-47624214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
119, 36
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr2:47443262-47443441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr2:81493596-81493431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr2:1762796-1762962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr2:21368950-21369140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 73
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr2:39750116-39750304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
177, 56
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr2:57939682-57939874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
160, 117
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr2:45542398-45542213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
177, 117
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr2:25597494-25597280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
128, 87
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr2:44170560-44170749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
180, 95
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr2:56325562-56325347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 26
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr2:1422352-1422547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
177, 39
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr2:13695240-13695042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
182, 99
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr2:42801041-42801231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
173, 30
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr2:45642484-45642297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
66, 39
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr2:38640324-38640516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr2:47753607-47753397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 70
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr2:11656893-11657089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
182, 15
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr2:15871939-15872129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
182, 39
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr2:22042537-22042754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr2:37009411-37009606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
179, 117
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr2:38965621-38965809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
178, 51
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr2:40373397-40373207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr2:46227460-46227665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
182, 63
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr2:72183491-72183266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr2:28330746-28330550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
182, 79
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr2:43444595-43444810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
132, 117
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr2:53851438-53851661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
132, 40
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr2:72310010-72309796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr2:83184155-83184375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr2:992156-992354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
99, 124
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr2:12950164-12949962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
177, 109
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr2:16514784-16514994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
116, 25
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr2:19137889-19137689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
182, 127
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr2:21382849-21382647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
182, 26
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr2:30642662-30642458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
132, 176
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr2:37619913-37619708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
39, 43
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr2:39068289-39068481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
103, 39
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr2:45624015-45624233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr2:46120639-46120443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
182, 23
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr2:58686927-58687136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
178, 116
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr2:71437377-71437175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
163, 115
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr2:42608067-42608268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
179, 114
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr2:64533336-64533549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
105, 52
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr2:68488005-68487782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
117, 180
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr2:5604526-5604729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
188, 63
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr2:78249740-78249950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
182, 41
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr2:45575002-45574797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
94, 10
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr2:42927449-42927215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
125, 68
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr2:14884242-14884454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
177, 98
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr2:46130152-46129953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
181, 23
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr2:58074343-58074132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
182, 61
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:971825-972034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
182, 127
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr2:6356379-6356149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr2:21410220-21410445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 129
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr2:45784738-45784964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 209
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr2:82116091-82116300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
177, 95
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr2:1638605-1638838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
115, 42
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr2:1335694-1335485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
203, 128
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr2:24535319-24535544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
139, 39
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr2:46161958-46162170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
182, 115
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr2:14634185-14634402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
177, 109
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr2:41248572-41248782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
182, 100
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr2:29282909-29283145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 26
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr2:46343143-46342931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
182, 27
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr2:62744007-62743789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
181, 42
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:33554169-33553958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:69350564-69350355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr2:29121884-29122106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
180, 46
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr2:84480500-84480282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
179, 117
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr2:49467630-49467849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
178, 127
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr2:28301206-28301418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
189, 64
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr2:44051312-44051532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
177, 39
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr2:46033336-46033561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
176, 118
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr2:46164499-46164276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
182, 42
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr2:17841987-17841771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
196, 79
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr2:43994936-43995157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr2:47879242-47879460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr2:75227202-75227428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 119
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr2:21049326-21049107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
182, 39
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr2:45499201-45498970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
177, 123
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr2:47070708-47070935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr2:43591372-43591145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr2:46052501-46052729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr2:54654613-54654384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
180, 10
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr2:71622046-71621819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
186, 41
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr2:1073521-1073756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr2:46189095-46188867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
175, 125
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr2:46745924-46746164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
175, 97
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr2:47115918-47115675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
113, 214
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr2:80275292-80275063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
177, 28
               

               
Conread position:
               
2-133
               

               
Cow position:
               
chr2:994363-994232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-136
               

               
Cow position:
               
chr2:54789777-54789910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr2:19494216-19494416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
179, 114
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr2:53491449-53491250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
94, 118
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr2:31783932-31784144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
179, 53
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr2:16667939-16668150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
176, 83
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr2:67302020-67302236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
181, 69
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr2:13468217-13468434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
181, 86
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr2:41452235-41452454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
176, 108
               

               
Conread position:
               
2-231
               

               
Cow position:
               
chr2:85794967-85794745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
176, 69
               

               
Conread position:
               
3-116
               

               
Cow position:
               
chr2:26102770-26102883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-116
               

               
Cow position:
               
chr2:59427453-59427565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
3-133
               

               
Cow position:
               
chr2:19287079-19286948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
26, 30
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr2:66094991-66094848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr2:11217795-11217967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr2:50565937-50566111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
3-194
               

               
Cow position:
               
chr2:10439842-10440015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
176, 98
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr2:16505473-16505274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
178, 98
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr2:30351703-30351508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
180, 115
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr2:60368319-60368529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr2:33988314-33988110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
180, 122
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr2:58135389-58135190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
130, 167
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr2:36424026-36424242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
126, 28
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr2:64773388-64773601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
114, 164
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr2:34474293-34474081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr2:70896037-70896249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr2:15219116-15219311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr2:39642753-39642949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr2:44191483-44191699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
126, 93
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr2:61421165-61420956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
124, 178
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr2:76861453-76861249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
130, 107
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr2:14626595-14626802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr2:50766476-50766674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr2:55496292-55496090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
175, 47
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr2:40703663-40703461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
169, 91
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr2:65554801-65554590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
176, 125
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr2:32660180-32660394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
179, 125
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr2:46312443-46312648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
174, 123
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr2:8821235-8821460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
151, 128
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr2:13369657-13369871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
178, 118
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr2:21003177-21003385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
150, 92
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr2:46351779-46351565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
175, 114
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr2:60260989-60260769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
47, 113
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr2:72315809-72315594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
175, 87
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr2:76562109-76562341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
93, 111
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr2:15348396-15348618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
175, 115
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr2:15597472-15597261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 42
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr2:22371949-22371738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
175, 115
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr2:31529494-31529704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr2:18997722-18997938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
180, 115
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr2:19294597-19294814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
175, 60
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr2:40410148-40410367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 84
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr2:44007422-44007652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
76, 128
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr2:29734828-29735060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr2:38837514-38837286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 81
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr2:54700459-54700684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
180, 115
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr2:39350486-39350259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
173, 40
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr2:47008340-47008109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
130, 39
               

               
Conread position:
               
4-129
               

               
Cow position:
               
chr2:1141487-1141610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr2:39514039-39514238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
178, 114
               

               
Conread position:
               
4-209
               

               
Cow position:
               
chr2:50449906-50449708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
174, 112
               

               
Conread position:
               
4-209
               

               
Cow position:
               
chr2:50905706-50905499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 108
               

               
Conread position:
               
4-216
               

               
Cow position:
               
chr2:36055795-36055572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr2:46057998-46057794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
179, 22
               

               
Conread position:
               
4-227
               

               
Cow position:
               
chr2:11599429-11599642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
174, 36
               

               
Conread position:
               
5-141
               

               
Cow position:
               
chr2:44032394-44032260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr2:24722266-24722081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr2:7383683-7383452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
123, 80
               

               
Conread position:
               
6-123
               

               
Cow position:
               
chr2:53501029-53500912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-181
               

               
Cow position:
               
chr2:20791429-20791254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-208
               

               
Cow position:
               
chr2:47595986-47595778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
6-219
               

               
Cow position:
               
chr2:17967023-17966829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
203, 112
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chr2:57802483-57802269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
173, 127
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr2:54883475-54883689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
170, 46
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr2:74079099-74078890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
7-126
               

               
Cow position:
               
chr2:35948672-35948554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
7-209
               

               
Cow position:
               
chr2:46019617-46019414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
7-219
               

               
Cow position:
               
chr2:45721260-45721049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
7-223
               

               
Cow position:
               
chr2:56350910-56350696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
171, 121
               

               
Conread position:
               
7-223
               

               
Cow position:
               
chr2:56937687-56937892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 35
               

               
Conread position:
               
8-223
               

               
Cow position:
               
chr2:37891483-37891267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
175, 135
               

               
Conread position:
               
10-223
               

               
Cow position:
               
chr2:46138492-46138278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
57, 111
               

               
Conread position:
               
11-121
               

               
Cow position:
               
chr2:42241322-42241214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
11-127
               

               
Cow position:
               
chr2:38658776-38658660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-128
               

               
Cow position:
               
chr2:35207925-35208044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
11-190
               

               
Cow position:
               
chr2:29860017-29860194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
118, 17
               

               
Conread position:
               
11-193
               

               
Cow position:
               
chr2:56339020-56338850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
172, 90
               

               
Conread position:
               
11-201
               

               
Cow position:
               
chr2:46202273-46202461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
11-205
               

               
Cow position:
               
chr2:19164956-19164771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
172, 105
               

               
Conread position:
               
11-208
               

               
Cow position:
               
chr2:51824983-51825175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
11-208
               

               
Cow position:
               
chr2:54931828-54931640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
165, 117
               

               
Conread position:
               
11-222
               

               
Cow position:
               
chr2:6539227-6539004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
11-223
               

               
Cow position:
               
chr2:9476425-9476216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
23, 117
               

               
Conread position:
               
12-198
               

               
Cow position:
               
chr2:47065120-47065303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
171, 24
               

               
Conread position:
               
12-207
               

               
Cow position:
               
chr2:28820376-28820571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
169, 116
               

               
Conread position:
               
12-209
               

               
Cow position:
               
chr2:12840028-12839827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
106, 20
               

               
Conread position:
               
12-209
               

               
Cow position:
               
chr2:46053482-46053675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
166, 116
               

               
Conread position:
               
12-209
               

               
Cow position:
               
chr2:59397041-59396849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
171, 43
               

               
Conread position:
               
12-209
               

               
Cow position:
               
chr2:69771128-69771336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
12-209
               

               
Cow position:
               
chr2:75637724-75637529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
81, 64
               

               
Conread position:
               
12-210
               

               
Cow position:
               
chr2:26694619-26694813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 66
               

               
Conread position:
               
12-214
               

               
Cow position:
               
chr2:42476218-42476027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
162, 38
               

               
Conread position:
               
12-220
               

               
Cow position:
               
chr2:65059050-65059255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
171, 73
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr2:14826288-14826495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
171, 106
               

               
Conread position:
               
12-226
               

               
Cow position:
               
chr2:19320011-19320220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
167, 105
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chr2:12866361-12866145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chr2:30954585-30954373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
121, 104
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chr2:32048492-32048699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
182, 116
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chr2:49428393-49428604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
169, 69
               

               
Conread position:
               
12-230
               

               
Cow position:
               
chr2:29394997-29394784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
171, 106
               

               
Conread position:
               
12-231
               

               
Cow position:
               
chr2:35934892-35935112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
171, 121
               

               
Conread position:
               
12-232
               

               
Cow position:
               
chr2:16839648-16839862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
12-232
               

               
Cow position:
               
chr2:32264380-32264170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
164, 98
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr2:16488001-16488213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 97
               

               
Conread position:
               
12-235
               

               
Cow position:
               
chr2:7478929-7478704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
171, 45
               

               
Conread position:
               
12-237
               

               
Cow position:
               
chr2:64473337-64473121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
13-123
               

               
Cow position:
               
chr2:78641265-78641374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
13-209
               

               
Cow position:
               
chr2:39590271-39590457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
170, 17
               

               
Conread position:
               
13-209
               

               
Cow position:
               
chr2:52398329-52398533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
13-222
               

               
Cow position:
               
chr2:12889819-12889612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
13-231
               

               
Cow position:
               
chr2:67596007-67595791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
168, 115
               

               
Conread position:
               
14-127
               

               
Cow position:
               
chr2:46143143-46143256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
14-168
               

               
Cow position:
               
chr2:39525476-39525630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
14-207
               

               
Cow position:
               
chr2:5300610-5300798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
14-209
               

               
Cow position:
               
chr2:40728364-40728561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
169, 115
               

               
Conread position:
               
14-217
               

               
Cow position:
               
chr2:11840637-11840851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
104, 14
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr2:38953837-38954045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
169, 105
               

               
Conread position:
               
14-229
               

               
Cow position:
               
chr2:1923871-1923661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
32, 27
               

               
Conread position:
               
14-237
               

               
Cow position:
               
chr2:28285352-28285124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
119, 197
               

               
Conread position:
               
15-209
               

               
Cow position:
               
chr2:76969167-76968962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
15-226
               

               
Cow position:
               
chr2:47018860-47019063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
166, 113
               

               
Conread position:
               
16-208
               

               
Cow position:
               
chr2:44063760-44063577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
160, 80
               

               
Conread position:
               
17-208
               

               
Cow position:
               
chr2:67047436-67047622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
154, 54
               

               
Conread position:
               
17-223
               

               
Cow position:
               
chr2:33251072-33250872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
166, 42
               

               
Conread position:
               
17-228
               

               
Cow position:
               
chr2:39368868-39369083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
112, 185
               

               
Conread position:
               
17-233
               

               
Cow position:
               
chr2:41040693-41040479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
166, 101
               

               
Conread position:
               
17-233
               

               
Cow position:
               
chr2:44215520-44215722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
166, 54
               

               
Conread position:
               
17-237
               

               
Cow position:
               
chr2:3128061-3127843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
17-237
               

               
Cow position:
               
chr2:78669908-78669694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
166, 36
               

               
Conread position:
               
18-227
               

               
Cow position:
               
chr2:8083614-8083817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr2:66562023-66561816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
139, 110
               

               
Conread position:
               
18-233
               

               
Cow position:
               
chr2:80838894-80838671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 58
               

               
Conread position:
               
19-201
               

               
Cow position:
               
chr2:45510540-45510356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
162, 17
               

               
Conread position:
               
19-237
               

               
Cow position:
               
chr2:46111036-46110813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 99
               

               
Conread position:
               
20-207
               

               
Cow position:
               
chr2:36963542-36963721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
156, 108
               

               
Conread position:
               
20-220
               

               
Cow position:
               
chr2:67479995-67480200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
127, 113
               

               
Conread position:
               
20-236
               

               
Cow position:
               
chr2:15400928-15400719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
163, 76
               

               
Conread position:
               
21-144
               

               
Cow position:
               
chr2:42394415-42394541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
21-208
               

               
Cow position:
               
chr2:43139636-43139454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
21-237
               

               
Cow position:
               
chr2:60182010-60181798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
162, 27
               

               
Conread position:
               
22-229
               

               
Cow position:
               
chr2:42897687-42897887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
161, 104
               

               
Conread position:
               
24-234
               

               
Cow position:
               
chr2:70657212-70657422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
115, 66
               

               
Conread position:
               
26-208
               

               
Cow position:
               
chr2:30384242-30384064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
154, 90
               

               
Conread position:
               
29-216
               

               
Cow position:
               
chr2:81293856-81294038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
149, 89
               

               
Conread position:
               
29-221
               

               
Cow position:
               
chr2:19441586-19441785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
77, 107
               

               
Conread position:
               
29-224
               

               
Cow position:
               
chr2:29681862-29682057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 45
               

               
Conread position:
               
29-225
               

               
Cow position:
               
chr2:9936627-9936437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
82, 67
               

               
Conread position:
               
29-226
               

               
Cow position:
               
chr2:66629217-66629419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
135, 99
               

               
Conread position:
               
29-231
               

               
Cow position:
               
chr2:36124462-36124657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
154, 42
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr2:12139520-12139320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 90
               

               
Conread position:
               
29-234
               

               
Cow position:
               
chr2:50825658-50825861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
29-237
               

               
Cow position:
               
chr2:1364570-1364366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
154, 72
               

               
Conread position:
               
30-122
               

               
Cow position:
               
chr2:13328974-13328882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-208
               

               
Cow position:
               
chr2:38647132-38646948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
30-210
               

               
Cow position:
               
chr2:44197904-44198083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
71, 54
               

               
Conread position:
               
30-220
               

               
Cow position:
               
chr2:78256320-78256504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
153, 68
               

               
Conread position:
               
30-222
               

               
Cow position:
               
chr2:44176991-44177178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
30-227
               

               
Cow position:
               
chr2:40488836-40489021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
148, 88
               

               
Conread position:
               
30-231
               

               
Cow position:
               
chr2:24393670-24393468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
148, 96
               

               
Conread position:
               
31-201
               

               
Cow position:
               
chr2:28322841-28322670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
147, 97
               

               
Conread position:
               
31-206
               

               
Cow position:
               
chr2:46378762-46378593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
150, 84
               

               
Conread position:
               
31-209
               

               
Cow position:
               
chr2:39663399-39663580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
147, 100
               

               
Conread position:
               
31-223
               

               
Cow position:
               
chr2:6744178-6743986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
147, 27
               

               
Conread position:
               
31-223
               

               
Cow position:
               
chr2:46015940-46015758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
147, 95
               

               
Conread position:
               
31-225
               

               
Cow position:
               
chr2:15229552-15229760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
31-232
               

               
Cow position:
               
chr2:40691558-40691757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
88, 46
               

               
Conread position:
               
31-235
               

               
Cow position:
               
chr2:73353823-73354035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
32-208
               

               
Cow position:
               
chr2:17942989-17942811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
144, 66
               

               
Conread position:
               
32-219
               

               
Cow position:
               
chr2:42456664-42456860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 11
               

               
Conread position:
               
32-222
               

               
Cow position:
               
chr2:55526742-55526559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
32-227
               

               
Cow position:
               
chr2:68328821-68328633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
33-201
               

               
Cow position:
               
chr2:51624636-51624466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
134, 98
               

               
Conread position:
               
33-209
               

               
Cow position:
               
chr2:64562906-64562735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
150, 83
               

               
Conread position:
               
33-228
               

               
Cow position:
               
chr2:44313686-44313494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 95
               

               
Conread position:
               
33-231
               

               
Cow position:
               
chr2:28872925-28873115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
144, 83
               

               
Conread position:
               
33-232
               

               
Cow position:
               
chr2:61474066-61473862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
143, 98
               

               
Conread position:
               
33-233
               

               
Cow position:
               
chr2:68998351-68998536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
37-237
               

               
Cow position:
               
chr2:38884386-38884191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
141, 78
               

               
Conread position:
               
39-216
               

               
Cow position:
               
chr2:39274818-39274992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
139, 42
               

               
Conread position:
               
39-235
               

               
Cow position:
               
chr2:46152816-46152617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
104, 78
               

               
Conread position:
               
41-214
               

               
Cow position:
               
chr2:67745283-67745455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
55, 61
               

               
Conread position:
               
42-223
               

               
Cow position:
               
chr2:73981674-73981844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
141, 74
               

               
Conread position:
               
44-234
               

               
Cow position:
               
chr2:12816674-12816858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
156, 84
               

               
Conread position:
               
45-209
               

               
Cow position:
               
chr2:11617362-11617537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
45-223
               

               
Cow position:
               
chr2:27599454-27599286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
133, 65
               

               
Conread position:
               
45-223
               

               
Cow position:
               
chr2:40508552-40508379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
138, 83
               

               
Conread position:
               
45-226
               

               
Cow position:
               
chr2:59992207-59992031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
138, 45
               

               
Conread position:
               
46-209
               

               
Cow position:
               
chr2:40318961-40319136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
47-213
               

               
Cow position:
               
chr2:26302640-26302471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
127, 49
               

               
Conread position:
               
47-233
               

               
Cow position:
               
chr2:72359588-72359406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
136, 69
               

               
Conread position:
               
48-220
               

               
Cow position:
               
chr2:57391672-57391486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
49-227
               

               
Cow position:
               
chr2:75562056-75562227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
51-230
               

               
Cow position:
               
chr2:47230445-47230609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
52-209
               

               
Cow position:
               
chr2:69828760-69828599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
131, 109
               

               
Conread position:
               
52-234
               

               
Cow position:
               
chr2:1205356-1205535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
131, 66
               

               
Conread position:
               
52-235
               

               
Cow position:
               
chr2:40882350-40882544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 165
               

               
Conread position:
               
55-225
               

               
Cow position:
               
chr2:66027611-66027777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
128, 74
               

               
Conread position:
               
55-230
               

               
Cow position:
               
chr2:67810987-67810819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
128, 21
               

               
Conread position:
               
56-223
               

               
Cow position:
               
chr2:80877674-80877850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
57-214
               

               
Cow position:
               
chr2:1777818-1777664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
121, 61
               

               
Conread position:
               
66-230
               

               
Cow position:
               
chr2:76603026-76602866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
111, 62
               

               
Conread position:
               
68-229
               

               
Cow position:
               
chr2:30394223-30394062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 47
               

               
Conread position:
               
85-216
               

               
Cow position:
               
chr2:18810074-18809937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
110-221
               

               
Cow position:
               
chr2:78641483-78641595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
112-237
               

               
Cow position:
               
chr2:65433667-65433799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
121-232
               

               
Cow position:
               
chr2:51417194-51417086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 10
               
Show alignments to all cow chromosomes.