Cow genome map
| Conread name: | rfhi4020b_c9.y1 |
| Conread position: | 1-112 |
| Cow position: | chr20:26077625-26077514 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-115 |
| Cow position: | chr20:19459622-19459508 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-115 |
| Cow position: | chr20:22978370-22978484 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-123 |
| Cow position: | chr20:38768417-38768298 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-127 |
| Cow position: | chr20:19060794-19060670 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 1-127 |
| Cow position: | chr20:19751350-19751476 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-133 |
| Cow position: | chr20:3255080-3255212 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 6 |
| Conread position: | 1-135 |
| Cow position: | chr20:8620105-8619973 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 132, 87 |
| Conread position: | 1-140 |
| Cow position: | chr20:21815604-21815742 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 1-144 |
| Cow position: | chr20:6358663-6358805 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 1-157 |
| Cow position: | chr20:26723635-26723482 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 132, 79 |
| Conread position: | 1-181 |
| Cow position: | chr20:38670793-38670977 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 1-191 |
| Cow position: | chr20:12085390-12085204 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 175, 27 |
| Conread position: | 1-191 |
| Cow position: | chr20:20203261-20203436 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 172, 98 |
| Conread position: | 1-200 |
| Cow position: | chr20:39269042-39268847 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 177, 104 |
| Conread position: | 1-202 |
| Cow position: | chr20:14879832-14880023 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 177, 94 |
| Conread position: | 1-203 |
| Cow position: | chr20:5998628-5998423 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 71, 124 |
| Conread position: | 1-204 |
| Cow position: | chr20:37090665-37090877 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 21, 140 |
| Conread position: | 1-205 |
| Cow position: | chr20:25009589-25009393 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 1-206 |
| Cow position: | chr20:20158179-20158372 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 1-207 |
| Cow position: | chr20:12420575-12420377 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 182, 63 |
| Conread position: | 1-207 |
| Cow position: | chr20:24902250-24902032 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 1-207 |
| Cow position: | chr20:38578717-38578506 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 112, 23 |
| Conread position: | 1-208 |
| Cow position: | chr20:32709402-32709197 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 182, 108 |
| Conread position: | 1-209 |
| Cow position: | chr20:8578292-8578499 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 182, 115 |
| Conread position: | 1-209 |
| Cow position: | chr20:11043429-11043216 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 123, 36 |
| Conread position: | 1-209 |
| Cow position: | chr20:12581911-12581712 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 182, 109 |
| Conread position: | 1-209 |
| Cow position: | chr20:24097044-24097239 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 182, 115 |
| Conread position: | 1-209 |
| Cow position: | chr20:28605253-28605450 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 182, 35 |
| Conread position: | 1-210 |
| Cow position: | chr20:38089956-38090161 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 180, 117 |
| Conread position: | 1-212 |
| Cow position: | chr20:580877-580650 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 1-219 |
| Cow position: | chr20:19636133-19635925 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 177, 117 |
| Conread position: | 1-220 |
| Cow position: | chr20:398263-398059 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 182, 95 |
| Conread position: | 1-221 |
| Cow position: | chr20:2204642-2204428 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 207, 87 |
| Conread position: | 1-221 |
| Cow position: | chr20:5702767-5702976 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 157, 127 |
| Conread position: | 1-221 |
| Cow position: | chr20:10208851-10209062 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 79 |
| Conread position: | 1-221 |
| Cow position: | chr20:23358448-23358238 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 182, 27 |
| Conread position: | 1-222 |
| Cow position: | chr20:15548853-15548633 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 182, 84 |
| Conread position: | 1-223 |
| Cow position: | chr20:40051885-40052105 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 117, 35 |
| Conread position: | 1-224 |
| Cow position: | chr20:35445060-35444847 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 180, 116 |
| Conread position: | 1-226 |
| Cow position: | chr20:5078670-5078899 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 182, 126 |
| Conread position: | 1-229 |
| Cow position: | chr20:7426154-7425928 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 177, 123 |
| Conread position: | 1-229 |
| Cow position: | chr20:14806930-14807147 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 177, 109 |
| Conread position: | 1-230 |
| Cow position: | chr20:3564203-3564415 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-230 |
| Cow position: | chr20:7756579-7756373 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-235 |
| Cow position: | chr20:24069849-24070071 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 182, 97 |
| Conread position: | 1-237 |
| Cow position: | chr20:8556226-8556002 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 176, 117 |
| Conread position: | 1-237 |
| Cow position: | chr20:38514822-38515061 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 180, 83 |
| Conread position: | 2-108 |
| Cow position: | chr20:19363318-19363213 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 2-120 |
| Cow position: | chr20:9412532-9412650 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-140 |
| Cow position: | chr20:22030366-22030500 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 131, 74 |
| Conread position: | 2-203 |
| Cow position: | chr20:3148728-3148919 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 181, 124 |
| Conread position: | 2-207 |
| Cow position: | chr20:39398525-39398724 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 179, 126 |
| Conread position: | 2-208 |
| Cow position: | chr20:7738187-7737991 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 181, 116 |
| Conread position: | 2-208 |
| Cow position: | chr20:20099557-20099359 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 28, 110 |
| Conread position: | 2-209 |
| Cow position: | chr20:2819587-2819790 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 181, 126 |
| Conread position: | 2-225 |
| Cow position: | chr20:26996574-26996794 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 176, 79 |
| Conread position: | 2-229 |
| Cow position: | chr20:8912454-8912229 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 155, 108 |
| Conread position: | 3-123 |
| Cow position: | chr20:34372657-34372539 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 3-126 |
| Cow position: | chr20:32463475-32463356 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 3-141 |
| Cow position: | chr20:23506425-23506290 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 3-144 |
| Cow position: | chr20:13752268-13752412 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 3-195 |
| Cow position: | chr20:39266912-39266706 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 110, 27 |
| Conread position: | 3-196 |
| Cow position: | chr20:36671387-36671200 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 34, 86 |
| Conread position: | 3-204 |
| Cow position: | chr20:11008215-11008412 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 91, 85 |
| Conread position: | 3-206 |
| Cow position: | chr20:6372514-6372323 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 3-207 |
| Cow position: | chr20:19834785-19834589 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 3-208 |
| Cow position: | chr20:21721255-21721463 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 174, 128 |
| Conread position: | 3-208 |
| Cow position: | chr20:29845096-29845298 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 174, 93 |
| Conread position: | 3-208 |
| Cow position: | chr20:35208161-35207961 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 78, 15 |
| Conread position: | 3-210 |
| Cow position: | chr20:35442237-35442037 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 180, 114 |
| Conread position: | 3-220 |
| Cow position: | chr20:36312463-36312260 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 175, 115 |
| Conread position: | 3-221 |
| Cow position: | chr20:21291705-21291922 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 178, 125 |
| Conread position: | 3-224 |
| Cow position: | chr20:15529906-15530117 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 180, 45 |
| Conread position: | 3-228 |
| Cow position: | chr20:382086-381871 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 177, 40 |
| Conread position: | 3-235 |
| Cow position: | chr20:12995960-12995730 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 130, 61 |
| Conread position: | 3-235 |
| Cow position: | chr20:36779684-36779449 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 180, 113 |
| Conread position: | 3-236 |
| Cow position: | chr20:5950598-5950369 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 168, 125 |
| Conread position: | 3-236 |
| Cow position: | chr20:32847390-32847614 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 177, 125 |
| Conread position: | 4-115 |
| Cow position: | chr20:36207860-36207971 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-143 |
| Cow position: | chr20:40157946-40158086 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 4-221 |
| Cow position: | chr20:16941241-16941027 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 172, 18 |
| Conread position: | 4-224 |
| Cow position: | chr20:28982748-28982958 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 174, 33 |
| Conread position: | 4-235 |
| Cow position: | chr20:20590255-20590046 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 5-123 |
| Cow position: | chr20:26905722-26905841 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 5-227 |
| Cow position: | chr20:26041051-26040835 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 173, 105 |
| Conread position: | 5-237 |
| Cow position: | chr20:18379426-18379650 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 173, 61 |
| Conread position: | 6-180 |
| Cow position: | chr20:2762018-2762184 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 6-226 |
| Cow position: | chr20:15766158-15766362 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 104 |
| Conread position: | 6-236 |
| Cow position: | chr20:8021174-8021408 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 177, 125 |
| Conread position: | 9-127 |
| Cow position: | chr20:21535682-21535565 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 10-207 |
| Cow position: | chr20:5826992-5827205 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 11-142 |
| Cow position: | chr20:2169670-2169539 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 101, 125 |
| Conread position: | 11-210 |
| Cow position: | chr20:6054456-6054262 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 156, 107 |
| Conread position: | 11-229 |
| Cow position: | chr20:13829315-13829522 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 172, 31 |
| Conread position: | 12-144 |
| Cow position: | chr20:36023346-36023213 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 12-206 |
| Cow position: | chr20:5703525-5703713 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 107 |
| Conread position: | 12-207 |
| Cow position: | chr20:7417113-7416918 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 164, 116 |
| Conread position: | 12-207 |
| Cow position: | chr20:19201585-19201776 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 171, 116 |
| Conread position: | 12-209 |
| Cow position: | chr20:20984046-20984241 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 171, 106 |
| Conread position: | 12-210 |
| Cow position: | chr20:17251772-17251964 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 171, 7 |
| Conread position: | 12-220 |
| Cow position: | chr20:34221533-34221737 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 171, 76 |
| Conread position: | 12-221 |
| Cow position: | chr20:4945197-4944995 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 171, 29 |
| Conread position: | 12-228 |
| Cow position: | chr20:23936130-23935915 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 164, 55 |
| Conread position: | 12-229 |
| Cow position: | chr20:4892065-4891856 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 171, 116 |
| Conread position: | 12-229 |
| Cow position: | chr20:17370197-17369979 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 166, 40 |
| Conread position: | 12-231 |
| Cow position: | chr20:33820509-33820736 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 76 |
| Conread position: | 12-233 |
| Cow position: | chr20:34097900-34097679 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 18, 107 |
| Conread position: | 13-182 |
| Cow position: | chr20:31746581-31746424 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 13-226 |
| Cow position: | chr20:24883312-24883101 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 110 |
| Conread position: | 13-229 |
| Cow position: | chr20:2822925-2823136 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 202, 118 |
| Conread position: | 13-229 |
| Cow position: | chr20:3141629-3141840 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 170, 75 |
| Conread position: | 13-235 |
| Cow position: | chr20:12126249-12126029 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 170, 105 |
| Conread position: | 13-237 |
| Cow position: | chr20:6473788-6474007 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 20 |
| Conread position: | 13-237 |
| Cow position: | chr20:36842631-36842859 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 51 |
| Conread position: | 14-206 |
| Cow position: | chr20:33438924-33438715 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 14-214 |
| Cow position: | chr20:34202691-34202891 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 154, 115 |
| Conread position: | 14-220 |
| Cow position: | chr20:38872945-38872746 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 27 |
| Conread position: | 14-233 |
| Cow position: | chr20:14282976-14283196 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 169, 112 |
| Conread position: | 15-208 |
| Cow position: | chr20:28935582-28935399 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 168, 38 |
| Conread position: | 17-204 |
| Cow position: | chr20:20739228-20739035 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 17-234 |
| Cow position: | chr20:19328447-19328669 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 128, 101 |
| Conread position: | 18-237 |
| Cow position: | chr20:5078332-5078551 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 145, 100 |
| Conread position: | 19-219 |
| Cow position: | chr20:9730058-9730259 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 114, 56 |
| Conread position: | 28-208 |
| Cow position: | chr20:5978776-5978600 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 63 |
| Conread position: | 29-174 |
| Cow position: | chr20:15515369-15515226 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 29-207 |
| Cow position: | chr20:2460593-2460418 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 29-209 |
| Cow position: | chr20:21345504-21345683 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 104, 130 |
| Conread position: | 29-209 |
| Cow position: | chr20:31077852-31078030 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 155, 23 |
| Conread position: | 29-209 |
| Cow position: | chr20:37229013-37228823 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 29-210 |
| Cow position: | chr20:37357927-37358104 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 29-218 |
| Cow position: | chr20:27323337-27323522 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 154, 99 |
| Conread position: | 29-221 |
| Cow position: | chr20:297936-297748 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 153, 14 |
| Conread position: | 29-231 |
| Cow position: | chr20:8245793-8245986 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 152, 11 |
| Conread position: | 30-209 |
| Cow position: | chr20:16977772-16977593 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 153, 80 |
| Conread position: | 31-209 |
| Cow position: | chr20:5364999-5365172 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 156, 97 |
| Conread position: | 31-219 |
| Cow position: | chr20:3588710-3588915 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 114 |
| Conread position: | 36-203 |
| Cow position: | chr20:26790533-26790362 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 147, 95 |
| Conread position: | 36-236 |
| Cow position: | chr20:10052812-10053015 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 84, 37 |
| Conread position: | 45-221 |
| Cow position: | chr20:21344554-21344725 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 138, 83 |
| Conread position: | 45-224 |
| Cow position: | chr20:6238550-6238371 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 62, 45 |
| Conread position: | 46-208 |
| Cow position: | chr20:27340403-27340556 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 46-230 |
| Cow position: | chr20:14922702-14922884 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 47-206 |
| Cow position: | chr20:23506024-23506177 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 136, 63 |
| Conread position: | 47-209 |
| Cow position: | chr20:34881308-34881159 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 47-237 |
| Cow position: | chr20:17733470-17733290 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 131, 63 |
| Conread position: | 57-208 |
| Cow position: | chr20:38432607-38432763 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 83-237 |
| Cow position: | chr20:7659104-7658954 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 41 |
| Conread position: | 109-237 |
| Cow position: | chr20:24522486-24522618 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 14 |
| Conread position: | 141-231 |
| Cow position: | chr20:1009259-1009166 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 82 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 42, 75 |
Show alignments to all cow chromosomes.