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Cow genome map

           
Conread name:
           
rfhi4020b_c9.y1
        

               
Conread position:
               
1-116
               

               
Cow position:
               
chr24:23694930-23694810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-120
               

               
Cow position:
               
chr24:23186943-23186821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1-125
               

               
Cow position:
               
chr24:33244371-33244494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr24:5754812-5754936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr24:31359297-31359422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 77
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr24:24491041-24490915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-133
               

               
Cow position:
               
chr24:15246667-15246536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr24:22133147-22133280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr24:31324261-31324391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr24:42981783-42981649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
121, 39
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr24:11007436-11007570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr24:17375614-17375756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr24:28319233-28319087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr24:13610287-13610437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 39
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr24:6912388-6912210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr24:31816554-31816736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
180, 125
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr24:18741596-18741402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
182, 128
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr24:29561597-29561415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
177, 117
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr24:25122320-25122504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
182, 41
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr24:28234021-28234211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
177, 39
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr24:29539953-29539760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
108, 42
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr24:27713429-27713239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
177, 117
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr24:5360695-5360884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
182, 40
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr24:25885182-25884975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
132, 49
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr24:27608122-27607937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
177, 59
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr24:18732126-18731933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr24:40983107-40983333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr24:21834983-21834787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
182, 100
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr24:2402392-2402200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
163, 99
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr24:10499190-10499395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr24:20364434-20364239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr24:24457274-24457065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
177, 100
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr24:27284797-27285001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
182, 24
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr24:28496606-28496406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr24:28600460-28600261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr24:40301136-40301337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
177, 46
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr24:43536929-43537136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
109, 95
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr24:230254-230458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 103
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr24:18474753-18474551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
178, 109
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr24:27844552-27844355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
177, 113
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr24:11119253-11119475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr24:15373381-15373610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr24:17104594-17104387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
175, 117
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr24:28062925-28063135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
144, 42
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr24:37975005-37974797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
177, 117
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr24:28470704-28470479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
132, 209
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr24:28689642-28689883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
30, 233
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr24:37823503-37823716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
177, 105
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr24:3412659-3412873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
176, 100
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr24:29985008-29984797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
181, 110
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr24:7390357-7390125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
132, 25
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr24:39791517-39791756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
128, 108
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr24:30235849-30236065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
182, 39
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr24:37650650-37650873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
180, 73
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr24:13948099-13948323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
173, 48
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr24:31812165-31812388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
177, 117
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr24:43028352-43028128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
182, 24
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr24:27726036-27725803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
171, 118
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr24:5141918-5142141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
178, 117
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr24:28990537-28990765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
203, 104
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr24:30314050-30313822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
103, 80
               

               
Conread position:
               
2-144
               

               
Cow position:
               
chr24:201660-201520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
2-144
               

               
Cow position:
               
chr24:30308576-30308438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
131, 74
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr24:42226250-42226441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
181, 46
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr24:16640886-16641100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 127
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr24:18485017-18484800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
172, 58
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr24:2379929-2380152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 44
               

               
Conread position:
               
3-109
               

               
Cow position:
               
chr24:19736356-19736251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
3-141
               

               
Cow position:
               
chr24:30202802-30202939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
3-194
               

               
Cow position:
               
chr24:5632443-5632254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
174, 49
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr24:29595831-29595629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
122, 82
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr24:28042953-28043164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
118, 204
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr24:37453526-37453328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
130, 57
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr24:19623834-19624041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
180, 16
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr24:2675293-2675513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr24:2992901-2992703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
180, 12
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr24:5152501-5152703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
180, 115
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr24:19779374-19779163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
129, 53
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr24:29606055-29605856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr24:34742730-34742926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 116
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr24:28690663-28690864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr24:31159597-31159808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
126, 24
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr24:27066208-27066411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
177, 61
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr24:28289275-28289051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
115, 98
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr24:20801368-20801154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
171, 92
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr24:24662153-24661923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
126, 159
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr24:29677938-29677709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 116
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr24:40404830-40404601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
128, 38
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr24:26001365-26001588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
178, 113
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr24:32204817-32204589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr24:6102808-6103026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
160, 38
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr24:36775799-36775569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
180, 40
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr24:13626261-13626491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
39, 43
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr24:34272787-34273020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 116
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr24:34465528-34465296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
114, 135
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr24:18614979-18615223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
129, 76
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr24:32054639-32054849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
4-128
               

               
Cow position:
               
chr24:1269765-1269887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
107, 36
               

               
Conread position:
               
4-139
               

               
Cow position:
               
chr24:35030082-35029948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
4-193
               

               
Cow position:
               
chr24:12077569-12077758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 159
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr24:15288806-15289010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
174, 114
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr24:27349195-27348987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
176, 36
               

               
Conread position:
               
4-235
               

               
Cow position:
               
chr24:28303386-28303159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 37
               

               
Conread position:
               
5-135
               

               
Cow position:
               
chr24:29063678-29063549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-209
               

               
Cow position:
               
chr24:37058959-37058741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
127, 104
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr24:161984-162194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
181, 122
               

               
Conread position:
               
7-181
               

               
Cow position:
               
chr24:7113204-7113377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
9-229
               

               
Cow position:
               
chr24:19768849-19769069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
11-204
               

               
Cow position:
               
chr24:4635182-4634993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
172, 117
               

               
Conread position:
               
11-228
               

               
Cow position:
               
chr24:27402215-27401999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
171, 7
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr24:12120882-12121103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
87, 77
               

               
Conread position:
               
11-235
               

               
Cow position:
               
chr24:27940635-27940425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
12-207
               

               
Cow position:
               
chr24:33238278-33238079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
171, 121
               

               
Conread position:
               
12-209
               

               
Cow position:
               
chr24:32891057-32890869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
171, 106
               

               
Conread position:
               
12-210
               

               
Cow position:
               
chr24:16089215-16089407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
167, 86
               

               
Conread position:
               
12-210
               

               
Cow position:
               
chr24:26848746-26848563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
12-218
               

               
Cow position:
               
chr24:42984378-42984581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
171, 83
               

               
Conread position:
               
12-219
               

               
Cow position:
               
chr24:18874834-18874635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
171, 83
               

               
Conread position:
               
12-220
               

               
Cow position:
               
chr24:25194252-25194453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
171, 43
               

               
Conread position:
               
12-220
               

               
Cow position:
               
chr24:33944388-33944594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
121, 143
               

               
Conread position:
               
12-225
               

               
Cow position:
               
chr24:39304934-39304717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
121, 98
               

               
Conread position:
               
12-230
               

               
Cow position:
               
chr24:32818313-32818091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
12-236
               

               
Cow position:
               
chr24:17689624-17689405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
171, 76
               

               
Conread position:
               
14-203
               

               
Cow position:
               
chr24:18313945-18313746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
14-203
               

               
Cow position:
               
chr24:42726439-42726629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
144, 97
               

               
Conread position:
               
14-207
               

               
Cow position:
               
chr24:27553084-27553275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
169, 58
               

               
Conread position:
               
14-210
               

               
Cow position:
               
chr24:33098484-33098294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
164, 102
               

               
Conread position:
               
14-212
               

               
Cow position:
               
chr24:11836415-11836221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
169, 114
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr24:27906427-27906626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr24:32739281-32739062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
169, 71
               

               
Conread position:
               
15-209
               

               
Cow position:
               
chr24:358356-358547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
166, 35
               

               
Conread position:
               
17-197
               

               
Cow position:
               
chr24:40130121-40130301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
159, 114
               

               
Conread position:
               
17-203
               

               
Cow position:
               
chr24:39218560-39218381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr24:39911041-39910832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
17-231
               

               
Cow position:
               
chr24:10219393-10219187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 28
               

               
Conread position:
               
17-234
               

               
Cow position:
               
chr24:43499650-43499860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
126, 79
               

               
Conread position:
               
18-225
               

               
Cow position:
               
chr24:40025384-40025190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
159, 61
               

               
Conread position:
               
18-229
               

               
Cow position:
               
chr24:18810824-18811031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
165, 100
               

               
Conread position:
               
19-166
               

               
Cow position:
               
chr24:27782209-27782356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
99, 131
               

               
Conread position:
               
20-231
               

               
Cow position:
               
chr24:20017433-20017226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
163, 108
               

               
Conread position:
               
20-236
               

               
Cow position:
               
chr24:11028694-11028482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
163, 76
               

               
Conread position:
               
24-207
               

               
Cow position:
               
chr24:31822575-31822765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
27-221
               

               
Cow position:
               
chr24:21887454-21887261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
156, 13
               

               
Conread position:
               
28-221
               

               
Cow position:
               
chr24:25947859-25947670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
155, 100
               

               
Conread position:
               
29-203
               

               
Cow position:
               
chr24:17832817-17832658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr24:36286573-36286768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
152, 87
               

               
Conread position:
               
29-237
               

               
Cow position:
               
chr24:41405898-41406099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
30-120
               

               
Cow position:
               
chr24:42815536-42815626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-214
               

               
Cow position:
               
chr24:34772308-34772119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
153, 98
               

               
Conread position:
               
30-230
               

               
Cow position:
               
chr24:24091335-24091136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
153, 83
               

               
Conread position:
               
30-233
               

               
Cow position:
               
chr24:31781875-31782077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
153, 71
               

               
Conread position:
               
30-237
               

               
Cow position:
               
chr24:22419965-22420170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
152, 88
               

               
Conread position:
               
31-207
               

               
Cow position:
               
chr24:42792344-42792527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 105
               

               
Conread position:
               
31-226
               

               
Cow position:
               
chr24:15340449-15340270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
183, 85
               

               
Conread position:
               
31-236
               

               
Cow position:
               
chr24:27149389-27149587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
150, 93
               

               
Conread position:
               
32-224
               

               
Cow position:
               
chr24:43024267-43024474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
33-210
               

               
Cow position:
               
chr24:6450502-6450687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
34-235
               

               
Cow position:
               
chr24:21656415-21656613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
107, 52
               

               
Conread position:
               
34-237
               

               
Cow position:
               
chr24:22129629-22129439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
35-135
               

               
Cow position:
               
chr24:43928353-43928252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
36-234
               

               
Cow position:
               
chr24:10840909-10840703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
43-209
               

               
Cow position:
               
chr24:42103384-42103538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
135, 48
               

               
Conread position:
               
45-210
               

               
Cow position:
               
chr24:38006698-38006534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
136, 73
               

               
Conread position:
               
46-231
               

               
Cow position:
               
chr24:18137281-18137101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
132, 50
               

               
Conread position:
               
49-226
               

               
Cow position:
               
chr24:21918173-21917996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
69, 144
               

               
Conread position:
               
55-203
               

               
Cow position:
               
chr24:30176476-30176621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
123, 68
               

               
Conread position:
               
57-221
               

               
Cow position:
               
chr24:41925854-41926004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
122, 56
               

               
Conread position:
               
60-227
               

               
Cow position:
               
chr24:34533156-34533330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 159
               

               
Conread position:
               
62-216
               

               
Cow position:
               
chr24:17492575-17492735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
69-211
               

               
Cow position:
               
chr24:43011328-43011184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 51
               

               
Conread position:
               
83-237
               

               
Cow position:
               
chr24:39841497-39841327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
109-229
               

               
Cow position:
               
chr24:28700123-28700237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
111-233
               

               
Cow position:
               
chr24:3057000-3057127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
128-226
               

               
Cow position:
               
chr24:19667889-19667987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
136-226
               

               
Cow position:
               
chr24:24251040-24251128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               
Show alignments to all cow chromosomes.