Cow genome map

Conread name: rfhi4020b_c9.y1

Conread position: 1-108
Cow position: chr27:19741452-19741559 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-109
Cow position: chr27:8353432-8353327 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 30

Conread position: 1-113
Cow position: chr27:15409080-15409192 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr27:20549753-20549868 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 1-120
Cow position: chr27:23943103-23942984 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-123
Cow position: chr27:28478536-28478414 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr27:20068021-20068142 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 13

Conread position: 1-125
Cow position: chr27:20553688-20553563 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 1-125
Cow position: chr27:20770572-20770696 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-126
Cow position: chr27:24305390-24305269 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 1-128
Cow position: chr27:27055242-27055118 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 30

Conread position: 1-129
Cow position: chr27:31148717-31148590 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 1-135
Cow position: chr27:22569740-22569609 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 1-141
Cow position: chr27:22348446-22348307 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 1-158
Cow position: chr27:22179813-22179976 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 128, 39

Conread position: 1-160
Cow position: chr27:26643641-26643484 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 135, 39

Conread position: 1-168
Cow position: chr27:26506698-26506544 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 1-181
Cow position: chr27:6319875-6319711 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 110, 0

Conread position: 1-181
Cow position: chr27:6674235-6674056 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 132, 39

Conread position: 1-181
Cow position: chr27:23890894-23890721 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 1-181
Cow position: chr27:26238981-26238812 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 1-190
Cow position: chr27:1768668-1768843 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 1-196
Cow position: chr27:30489454-30489660 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 166
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 132, 0

Conread position: 1-201
Cow position: chr27:26323404-26323205 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 182, 8

Conread position: 1-202
Cow position: chr27:15378523-15378719 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 83, 25

Conread position: 1-206
Cow position: chr27:19387974-19387779 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 177, 29

Conread position: 1-206
Cow position: chr27:19717871-19717656 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 172
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 123, 0

Conread position: 1-207
Cow position: chr27:590806-591011 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 180, 110

Conread position: 1-207
Cow position: chr27:22171253-22171059 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 182, 39

Conread position: 1-207
Cow position: chr27:22603135-22602931 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 164, 25

Conread position: 1-207
Cow position: chr27:23452417-23452220 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 177, 30

Conread position: 1-207
Cow position: chr27:24223908-24223712 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 47

Conread position: 1-207
Cow position: chr27:27389065-27389270 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 110

Conread position: 1-208
Cow position: chr27:237225-237008 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 117, 61

Conread position: 1-208
Cow position: chr27:31210503-31210306 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 182, 29

Conread position: 1-209
Cow position: chr27:7412349-7412148 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 180, 125

Conread position: 1-209
Cow position: chr27:15668815-15669019 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 177, 109

Conread position: 1-209
Cow position: chr27:18767107-18767328 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 1-209
Cow position: chr27:19576367-19576568 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 182, 127

Conread position: 1-209
Cow position: chr27:20795746-20795531 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 117, 39

Conread position: 1-209
Cow position: chr27:27245398-27245607 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 180, 100

Conread position: 1-210
Cow position: chr27:29614998-29614796 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 31

Conread position: 1-219
Cow position: chr27:19508969-19508757 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 182, 127

Conread position: 1-220
Cow position: chr27:6106656-6106450 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 174
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 111, 35

Conread position: 1-220
Cow position: chr27:12459240-12459037 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 1-223
Cow position: chr27:7343472-7343685 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 73, 96

Conread position: 1-224
Cow position: chr27:13204415-13204206 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 1-224
Cow position: chr27:17331452-17331232 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 182, 39

Conread position: 1-224
Cow position: chr27:27532096-27531865 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 219

Conread position: 1-228
Cow position: chr27:16103763-16103548 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 180, 39

Conread position: 1-229
Cow position: chr27:815320-815069 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 11, 151

Conread position: 1-229
Cow position: chr27:22035421-22035636 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 177, 115

Conread position: 1-229
Cow position: chr27:23560075-23560295 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 179, 109

Conread position: 1-230
Cow position: chr27:788841-789074 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 132, 100

Conread position: 1-231
Cow position: chr27:4944558-4944773 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-231
Cow position: chr27:20828754-20828971 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 182, 95

Conread position: 1-233
Cow position: chr27:4720159-4720397 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 39

Conread position: 1-234
Cow position: chr27:20758082-20758322 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 110, 39

Conread position: 1-235
Cow position: chr27:16284431-16284204 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 26, 31

Conread position: 1-236
Cow position: chr27:426925-426698 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 182, 42

Conread position: 1-237
Cow position: chr27:17102852-17102625 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 175, 75

Conread position: 1-237
Cow position: chr27:17397498-17397724 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 182, 117

Conread position: 1-237
Cow position: chr27:20486014-20485772 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 13, 32

Conread position: 1-237
Cow position: chr27:22220510-22220276 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 180, 115

Conread position: 1-237
Cow position: chr27:26433851-26434087 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 182, 95

Conread position: 2-209
Cow position: chr27:7212758-7212975 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 114, 0

Conread position: 2-209
Cow position: chr27:24440267-24440462 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 108, 0

Conread position: 2-209
Cow position: chr27:27136565-27136783 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 96

Conread position: 2-209
Cow position: chr27:28206754-28206559 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 180, 24

Conread position: 2-222
Cow position: chr27:23485164-23484958 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 179, 38

Conread position: 3-141
Cow position: chr27:17918359-17918497 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 126, 133

Conread position: 3-181
Cow position: chr27:12710203-12710028 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 48, 82

Conread position: 3-181
Cow position: chr27:22454821-22455005 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 3-195
Cow position: chr27:19660886-19660697 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 175, 112

Conread position: 3-200
Cow position: chr27:7731303-7731510 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 3-207
Cow position: chr27:23594275-23594076 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 176, 47

Conread position: 3-208
Cow position: chr27:11982692-11982892 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 176, 61

Conread position: 3-209
Cow position: chr27:18435179-18435375 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 177, 112

Conread position: 3-209
Cow position: chr27:20584502-20584712 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 128, 40

Conread position: 3-220
Cow position: chr27:10307346-10307558 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 180, 33

Conread position: 3-221
Cow position: chr27:23510941-23510718 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 67, 53

Conread position: 3-227
Cow position: chr27:20629023-20628796 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 175, 103

Conread position: 3-229
Cow position: chr27:16780820-16780595 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 90, 36

Conread position: 3-229
Cow position: chr27:20514773-20514558 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 209, 23

Conread position: 3-229
Cow position: chr27:29319365-29319141 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 98

Conread position: 3-230
Cow position: chr27:10323791-10323578 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 179, 33

Conread position: 3-231
Cow position: chr27:23148120-23147895 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 158, 125

Conread position: 3-234
Cow position: chr27:10404162-10404385 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 39, 25

Conread position: 3-234
Cow position: chr27:10581483-10581266 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 175, 27

Conread position: 3-234
Cow position: chr27:24303901-24303672 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 180, 129

Conread position: 3-237
Cow position: chr27:17918763-17919023 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 126, 0

Conread position: 3-237
Cow position: chr27:26413300-26413558 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 3-237
Cow position: chr27:29593675-29593894 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 180, 34

Conread position: 4-157
Cow position: chr27:20812858-20812706 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 131, 0

Conread position: 4-209
Cow position: chr27:20241297-20241498 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 4-221
Cow position: chr27:15454161-15453956 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 166, 36

Conread position: 4-229
Cow position: chr27:11134039-11133824 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 177, 38

Conread position: 4-230
Cow position: chr27:11208602-11208823 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 173, 7

Conread position: 5-108
Cow position: chr27:1122983-1122881 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 5-181
Cow position: chr27:27694820-27694987 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 5-207
Cow position: chr27:26999470-26999666 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 172, 90

Conread position: 6-127
Cow position: chr27:23504010-23504131 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-203
Cow position: chr27:16589751-16589962 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 111, 0

Conread position: 6-208
Cow position: chr27:12284945-12284750 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 6-225
Cow position: chr27:20517609-20517393 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 159, 74

Conread position: 6-225
Cow position: chr27:28921941-28922156 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 177, 122

Conread position: 6-228
Cow position: chr27:29184886-29185104 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 7-109
Cow position: chr27:20092884-20092986 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-210
Cow position: chr27:7448111-7448325 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 122, 103

Conread position: 10-205
Cow position: chr27:20325091-20324898 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 168, 118

Conread position: 10-206
Cow position: chr27:30884975-30884786 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 183, 113

Conread position: 10-231
Cow position: chr27:21677477-21677696 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 31

Conread position: 11-209
Cow position: chr27:8629925-8630119 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 167, 31

Conread position: 11-213
Cow position: chr27:28038898-28039100 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 122, 81

Conread position: 12-209
Cow position: chr27:10979808-10979615 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 82

Conread position: 12-210
Cow position: chr27:31170119-31170318 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 86, 32

Conread position: 12-219
Cow position: chr27:25809574-25809770 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 165, 14

Conread position: 12-221
Cow position: chr27:26793838-26794042 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 171, 84

Conread position: 12-222
Cow position: chr27:5553414-5553215 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 171, 17

Conread position: 12-223
Cow position: chr27:2592488-2592279 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 28, 119

Conread position: 12-225
Cow position: chr27:31498724-31498524 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 14

Conread position: 12-231
Cow position: chr27:27255933-27255698 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 12-232
Cow position: chr27:26481250-26481465 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 156, 48

Conread position: 12-233
Cow position: chr27:28015790-28016001 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 171, 16

Conread position: 12-233
Cow position: chr27:28541167-28541405 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 12-236
Cow position: chr27:7649636-7649863 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 99

Conread position: 12-236
Cow position: chr27:11480691-11480910 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 166, 116

Conread position: 12-237
Cow position: chr27:19546569-19546796 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 171, 24

Conread position: 12-237
Cow position: chr27:20045837-20045626 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 30

Conread position: 13-210
Cow position: chr27:18752800-18752601 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 170, 57

Conread position: 13-229
Cow position: chr27:30868796-30869016 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 83

Conread position: 13-232
Cow position: chr27:18791565-18791779 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 117

Conread position: 14-160
Cow position: chr27:4672956-4672807 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 14-205
Cow position: chr27:29693421-29693226 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 90, 74

Conread position: 14-208
Cow position: chr27:19452945-19452756 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 101

Conread position: 14-209
Cow position: chr27:28290805-28290597 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 27

Conread position: 14-221
Cow position: chr27:28931859-28932059 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 168, 15

Conread position: 14-223
Cow position: chr27:16705194-16704992 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 164, 104

Conread position: 14-235
Cow position: chr27:30914952-30914735 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 168, 17

Conread position: 17-206
Cow position: chr27:27449945-27450125 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 166, 107

Conread position: 17-219
Cow position: chr27:23994475-23994669 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 16

Conread position: 17-221
Cow position: chr27:29249532-29249328 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 21, 29

Conread position: 18-221
Cow position: chr27:4390319-4390516 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 158, 78

Conread position: 19-235
Cow position: chr27:24240297-24240081 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 160, 23

Conread position: 19-237
Cow position: chr27:9504491-9504283 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 85, 18

Conread position: 24-225
Cow position: chr27:16088737-16088529 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 106, 69

Conread position: 24-229
Cow position: chr27:31183509-31183308 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 154, 104

Conread position: 29-203
Cow position: chr27:21951050-21951219 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 149, 87

Conread position: 29-210
Cow position: chr27:29236492-29236312 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 153, 102

Conread position: 29-229
Cow position: chr27:20337030-20336822 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 30-206
Cow position: chr27:29183289-29183468 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 127, 98

Conread position: 31-216
Cow position: chr27:9253187-9253364 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 152, 97

Conread position: 32-209
Cow position: chr27:11528856-11528684 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 151, 85

Conread position: 32-235
Cow position: chr27:20490456-20490256 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 133, 86

Conread position: 33-208
Cow position: chr27:21143142-21143321 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 6, 103

Conread position: 33-224
Cow position: chr27:15434249-15434073 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 35-217
Cow position: chr27:27204507-27204691 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 31

Conread position: 42-209
Cow position: chr27:18748994-18749165 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 99, 46

Conread position: 42-225
Cow position: chr27:26317981-26317805 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 137, 86

Conread position: 43-210
Cow position: chr27:30407123-30407293 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 126, 58

Conread position: 45-223
Cow position: chr27:25000048-25000226 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 138, 73

Conread position: 45-236
Cow position: chr27:12516106-12515922 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 122, 83

Conread position: 48-229
Cow position: chr27:26467650-26467826 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 9

Conread position: 51-209
Cow position: chr27:23748634-23748810 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 52-223
Cow position: chr27:21054365-21054200 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 131, 80

Conread position: 55-232
Cow position: chr27:27012601-27012427 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 128, 73

Conread position: 58-225
Cow position: chr27:20825891-20826056 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 125, 70

Conread position: 59-218
Cow position: chr27:30804100-30803927 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 72-223
Cow position: chr27:4872964-4873122 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 32, 24

Conread position: 88-237
Cow position: chr27:22181942-22181787 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 44

Conread position: 109-209
Cow position: chr27:31556951-31556849 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 72, 18

Conread position: 117-209
Cow position: chr27:154278-154180 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 128-235
Cow position: chr27:19741552-19741662 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 55, 10

Show alignments to all cow chromosomes.