Cow genome map
| Conread name: | rfhi4020b_c9.y1 |
| Conread position: | 1-105 |
| Cow position: | chr29:42099089-42099193 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-124 |
| Cow position: | chr29:29308573-29308449 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 1-124 |
| Cow position: | chr29:36217113-36217233 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-127 |
| Cow position: | chr29:4874885-4874756 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 77 |
| Conread position: | 1-128 |
| Cow position: | chr29:28197008-28196886 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-128 |
| Cow position: | chr29:41112881-41112756 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-136 |
| Cow position: | chr29:5186495-5186358 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 1-144 |
| Cow position: | chr29:23243880-23243738 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 1-144 |
| Cow position: | chr29:32211068-32210930 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 132, 29 |
| Conread position: | 1-147 |
| Cow position: | chr29:21285358-21285504 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 132, 59 |
| Conread position: | 1-152 |
| Cow position: | chr29:22162251-22162102 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 140, 109 |
| Conread position: | 1-155 |
| Cow position: | chr29:30918547-30918701 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 138, 130 |
| Conread position: | 1-181 |
| Cow position: | chr29:23825212-23825045 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 1-190 |
| Cow position: | chr29:22723599-22723777 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 182, 127 |
| Conread position: | 1-196 |
| Cow position: | chr29:34358980-34358792 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 179, 128 |
| Conread position: | 1-203 |
| Cow position: | chr29:9310598-9310797 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 48, 43 |
| Conread position: | 1-203 |
| Cow position: | chr29:15796484-15796678 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 178, 41 |
| Conread position: | 1-203 |
| Cow position: | chr29:40874009-40874222 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 118, 165 |
| Conread position: | 1-205 |
| Cow position: | chr29:22714724-22714514 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 10 |
| Conread position: | 1-206 |
| Cow position: | chr29:40117570-40117762 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 177, 63 |
| Conread position: | 1-207 |
| Cow position: | chr29:19125320-19125528 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 182, 130 |
| Conread position: | 1-207 |
| Cow position: | chr29:23155226-23155433 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 140, 15 |
| Conread position: | 1-208 |
| Cow position: | chr29:26672913-26672700 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 103, 81 |
| Conread position: | 1-209 |
| Cow position: | chr29:8926463-8926250 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 48 |
| Conread position: | 1-209 |
| Cow position: | chr29:19762269-19762463 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 177, 41 |
| Conread position: | 1-209 |
| Cow position: | chr29:24624248-24624441 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-209 |
| Cow position: | chr29:25737416-25737220 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 182, 113 |
| Conread position: | 1-209 |
| Cow position: | chr29:26540542-26540340 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 175, 100 |
| Conread position: | 1-210 |
| Cow position: | chr29:11527791-11527568 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 109, 39 |
| Conread position: | 1-210 |
| Cow position: | chr29:15797950-15798152 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 178, 109 |
| Conread position: | 1-214 |
| Cow position: | chr29:36357127-36357333 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 180, 34 |
| Conread position: | 1-214 |
| Cow position: | chr29:45005629-45005428 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-218 |
| Cow position: | chr29:43088309-43088518 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 182, 40 |
| Conread position: | 1-219 |
| Cow position: | chr29:1011582-1011385 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 182, 39 |
| Conread position: | 1-220 |
| Cow position: | chr29:10058537-10058330 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 182, 44 |
| Conread position: | 1-221 |
| Cow position: | chr29:9378635-9378848 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 181, 125 |
| Conread position: | 1-221 |
| Cow position: | chr29:20770345-20770556 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-221 |
| Cow position: | chr29:23220501-23220278 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 118, 70 |
| Conread position: | 1-222 |
| Cow position: | chr29:5892843-5893058 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 182, 123 |
| Conread position: | 1-222 |
| Cow position: | chr29:17109958-17110166 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 182, 39 |
| Conread position: | 1-222 |
| Cow position: | chr29:36530865-36531081 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 177, 115 |
| Conread position: | 1-222 |
| Cow position: | chr29:38980076-38979866 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 21 |
| Conread position: | 1-224 |
| Cow position: | chr29:36210144-36210367 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 173, 41 |
| Conread position: | 1-225 |
| Cow position: | chr29:1325441-1325662 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 182, 25 |
| Conread position: | 1-225 |
| Cow position: | chr29:35501656-35501449 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 1-226 |
| Cow position: | chr29:17804533-17804741 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-226 |
| Cow position: | chr29:39038271-39038051 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 177, 118 |
| Conread position: | 1-227 |
| Cow position: | chr29:12680154-12680376 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 182, 100 |
| Conread position: | 1-228 |
| Cow position: | chr29:39329605-39329364 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 1-229 |
| Cow position: | chr29:31928987-31929205 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 182, 60 |
| Conread position: | 1-230 |
| Cow position: | chr29:22729566-22729786 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 182, 28 |
| Conread position: | 1-231 |
| Cow position: | chr29:13373295-13373543 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 37, 87 |
| Conread position: | 1-236 |
| Cow position: | chr29:7290774-7290994 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 182, 127 |
| Conread position: | 3-194 |
| Cow position: | chr29:13639367-13639184 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 124 |
| Conread position: | 3-207 |
| Cow position: | chr29:29769351-29769156 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 3-208 |
| Cow position: | chr29:11397926-11397714 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 3-209 |
| Cow position: | chr29:22735105-22734906 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 180, 37 |
| Conread position: | 3-209 |
| Cow position: | chr29:40299020-40298796 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 3-210 |
| Cow position: | chr29:38580980-38581193 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 115, 44 |
| Conread position: | 3-210 |
| Cow position: | chr29:41530850-41531052 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 180, 93 |
| Conread position: | 3-219 |
| Cow position: | chr29:20167424-20167632 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 105, 126 |
| Conread position: | 3-221 |
| Cow position: | chr29:24188065-24187850 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 180, 115 |
| Conread position: | 3-224 |
| Cow position: | chr29:14576859-14577072 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 180, 107 |
| Conread position: | 3-229 |
| Cow position: | chr29:31200258-31200494 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 130, 106 |
| Conread position: | 3-230 |
| Cow position: | chr29:629538-629756 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 3-231 |
| Cow position: | chr29:19949310-19949527 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 178, 37 |
| Conread position: | 3-231 |
| Cow position: | chr29:30681710-30681481 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 180, 30 |
| Conread position: | 3-234 |
| Cow position: | chr29:31489319-31489547 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 180, 111 |
| Conread position: | 4-181 |
| Cow position: | chr29:34760412-34760234 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 116, 22 |
| Conread position: | 4-200 |
| Cow position: | chr29:28840157-28840364 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 4-209 |
| Cow position: | chr29:19363712-19363908 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 4-217 |
| Cow position: | chr29:36781303-36781102 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 179, 114 |
| Conread position: | 4-219 |
| Cow position: | chr29:11562614-11562837 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 98, 84 |
| Conread position: | 4-221 |
| Cow position: | chr29:22028951-22028748 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 176, 36 |
| Conread position: | 5-139 |
| Cow position: | chr29:8190198-8190065 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 5-193 |
| Cow position: | chr29:30548778-30548957 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 174, 106 |
| Conread position: | 5-207 |
| Cow position: | chr29:36697759-36697955 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 128, 105 |
| Conread position: | 5-215 |
| Cow position: | chr29:29324418-29324215 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 173, 35 |
| Conread position: | 6-141 |
| Cow position: | chr29:20903287-20903152 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-226 |
| Cow position: | chr29:22519124-22518904 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 63, 76 |
| Conread position: | 9-232 |
| Cow position: | chr29:9800656-9800879 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 37, 32 |
| Conread position: | 10-208 |
| Cow position: | chr29:18579828-18579620 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 118, 16 |
| Conread position: | 11-223 |
| Cow position: | chr29:26211060-26211268 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 172, 77 |
| Conread position: | 11-232 |
| Cow position: | chr29:8004915-8004698 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 122, 15 |
| Conread position: | 11-233 |
| Cow position: | chr29:25288915-25288700 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 12-199 |
| Cow position: | chr29:21443329-21443151 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 76 |
| Conread position: | 12-200 |
| Cow position: | chr29:2262983-2262790 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 119, 29 |
| Conread position: | 12-205 |
| Cow position: | chr29:6844624-6844414 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 12-209 |
| Cow position: | chr29:501206-501400 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 171, 106 |
| Conread position: | 12-212 |
| Cow position: | chr29:5520476-5520281 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 168, 109 |
| Conread position: | 12-216 |
| Cow position: | chr29:17297145-17297345 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 88, 76 |
| Conread position: | 12-220 |
| Cow position: | chr29:40096977-40097189 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 12-221 |
| Cow position: | chr29:19742463-19742687 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 12-221 |
| Cow position: | chr29:35258994-35259193 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 161, 98 |
| Conread position: | 12-226 |
| Cow position: | chr29:32799702-32799486 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 162, 27 |
| Conread position: | 12-230 |
| Cow position: | chr29:5046662-5046871 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 96, 117 |
| Conread position: | 12-230 |
| Cow position: | chr29:24292877-24293091 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 30 |
| Conread position: | 12-231 |
| Cow position: | chr29:34745649-34745439 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 174, 68 |
| Conread position: | 12-233 |
| Cow position: | chr29:18878472-18878256 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 88, 76 |
| Conread position: | 12-234 |
| Cow position: | chr29:1022305-1022521 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 88 |
| Conread position: | 12-237 |
| Cow position: | chr29:4648200-4647985 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 166, 98 |
| Conread position: | 13-144 |
| Cow position: | chr29:17022160-17022292 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 13-226 |
| Cow position: | chr29:4441195-4440989 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 13-229 |
| Cow position: | chr29:25432464-25432679 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 185, 16 |
| Conread position: | 13-230 |
| Cow position: | chr29:23874470-23874684 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 170, 115 |
| Conread position: | 13-237 |
| Cow position: | chr29:40351065-40350854 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 14-232 |
| Cow position: | chr29:26563812-26563601 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 27 |
| Conread position: | 15-209 |
| Cow position: | chr29:13028451-13028650 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 8, 118 |
| Conread position: | 15-235 |
| Cow position: | chr29:35737315-35737093 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 64, 96 |
| Conread position: | 17-180 |
| Cow position: | chr29:33393692-33393854 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 17-201 |
| Cow position: | chr29:22175695-22175882 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 108, 159 |
| Conread position: | 17-232 |
| Cow position: | chr29:38348014-38347815 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 18-226 |
| Cow position: | chr29:28948989-28949204 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 25 |
| Conread position: | 19-225 |
| Cow position: | chr29:35084206-35084007 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 158, 91 |
| Conread position: | 19-234 |
| Cow position: | chr29:34675993-34675782 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 158, 109 |
| Conread position: | 28-208 |
| Cow position: | chr29:42771662-42771852 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 29-203 |
| Cow position: | chr29:30743690-30743516 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 154, 39 |
| Conread position: | 29-208 |
| Cow position: | chr29:26631067-26631248 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 151, 82 |
| Conread position: | 29-217 |
| Cow position: | chr29:15947193-15947377 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 154, 89 |
| Conread position: | 29-218 |
| Cow position: | chr29:19061748-19061552 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 104, 56 |
| Conread position: | 29-221 |
| Cow position: | chr29:25096855-25097059 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 29-231 |
| Cow position: | chr29:8798989-8798793 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 158, 99 |
| Conread position: | 29-237 |
| Cow position: | chr29:6636105-6636307 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 60 |
| Conread position: | 29-237 |
| Cow position: | chr29:20579037-20579255 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 17, 11 |
| Conread position: | 30-226 |
| Cow position: | chr29:27997223-27997032 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 148, 66 |
| Conread position: | 30-233 |
| Cow position: | chr29:35071057-35070849 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 31-196 |
| Cow position: | chr29:27042300-27042458 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 31-199 |
| Cow position: | chr29:17663733-17663568 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 137, 87 |
| Conread position: | 31-199 |
| Cow position: | chr29:22335201-22335035 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 128, 97 |
| Conread position: | 31-200 |
| Cow position: | chr29:934949-935117 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 149, 69 |
| Conread position: | 31-214 |
| Cow position: | chr29:21645341-21645522 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 150, 12 |
| Conread position: | 31-226 |
| Cow position: | chr29:27961939-27961749 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 146, 65 |
| Conread position: | 31-229 |
| Cow position: | chr29:18748362-18748168 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 137, 87 |
| Conread position: | 31-232 |
| Cow position: | chr29:27858814-27859011 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 98 |
| Conread position: | 33-236 |
| Cow position: | chr29:11915849-11916047 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 96 |
| Conread position: | 33-237 |
| Cow position: | chr29:10847035-10846845 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 181, 85 |
| Conread position: | 34-208 |
| Cow position: | chr29:2730260-2730082 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 109, 77 |
| Conread position: | 34-237 |
| Cow position: | chr29:40112413-40112607 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 14 |
| Conread position: | 36-209 |
| Cow position: | chr29:37990966-37990787 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 37-208 |
| Cow position: | chr29:43311514-43311343 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 141, 90 |
| Conread position: | 42-208 |
| Cow position: | chr29:18605621-18605469 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 43-213 |
| Cow position: | chr29:19756474-19756640 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 91, 27 |
| Conread position: | 45-208 |
| Cow position: | chr29:16438737-16438573 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 133, 65 |
| Conread position: | 45-219 |
| Cow position: | chr29:24604938-24605106 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 138, 84 |
| Conread position: | 46-208 |
| Cow position: | chr29:36546739-36546583 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 137, 72 |
| Conread position: | 58-218 |
| Cow position: | chr29:8767934-8768111 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 58-230 |
| Cow position: | chr29:10838996-10839160 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 125, 60 |
| Conread position: | 59-209 |
| Cow position: | chr29:2071148-2070996 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 124, 49 |
| Conread position: | 61-209 |
| Cow position: | chr29:5995037-5994889 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 133, 40 |
| Conread position: | 70-227 |
| Cow position: | chr29:22705102-22705261 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 108, 61 |
| Conread position: | 77-226 |
| Cow position: | chr29:19587121-19586961 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 83-220 |
| Cow position: | chr29:34919379-34919251 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 100, 35 |
| Conread position: | 89-222 |
| Cow position: | chr29:30542001-30541866 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 117-236 |
| Cow position: | chr29:3707389-3707506 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 120-225 |
| Cow position: | chr29:29176257-29176147 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 19 |
Show alignments to all cow chromosomes.