Cow genome map


           Conread name:
           rfhi4026b_b20.y1
        

               Conread position:
               1-137
               

               Cow position:
               chr27:23510948-23511083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-148
               

               Cow position:
               chr27:22386829-22386974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr27:16625858-16626010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1-317
               

               Cow position:
               chr27:20549748-20549411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               172, 21
               

               Conread position:
               1-318
               

               Cow position:
               chr27:17397493-17397182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 37
               

               Conread position:
               2-170
               

               Cow position:
               chr27:9697738-9697904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               2-320
               

               Cow position:
               chr27:4672978-4673290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 36
               

               Conread position:
               18-320
               

               Cow position:
               chr27:14670414-14670106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 213
               

               Conread position:
               32-232
               

               Cow position:
               chr27:22547421-22547216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               8, 0
               
Show alignments to all cow chromosomes.