Cow genome map


           Conread name:
           rfhi4026b_b20.y1
        

               Conread position:
               1-195
               

               Cow position:
               chr6:61608547-61608352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               157
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               168, 35
               

               Conread position:
               1-235
               

               Cow position:
               chr6:6400989-6400753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               172, 37
               

               Conread position:
               1-267
               

               Cow position:
               chr6:21542358-21542094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               5-288
               

               Cow position:
               chr6:54132847-54132572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 73
               

               Conread position:
               17-260
               

               Cow position:
               chr6:4383509-4383274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               22-320
               

               Cow position:
               chr6:58173202-58172909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 88
               

               Conread position:
               23-196
               

               Cow position:
               chr6:60740033-60739859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               23-237
               

               Cow position:
               chr6:8187501-8187716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 49
               

               Conread position:
               23-300
               

               Cow position:
               chr6:64449409-64449133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               91, 183
               

               Conread position:
               27-281
               

               Cow position:
               chr6:9736637-9736879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               88, 39
               

               Conread position:
               38-320
               

               Cow position:
               chr6:22877156-22877433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               49, 61
               
Show alignments to all cow chromosomes.