Cow genome map

Conread name: rfhi4033b_e23.y1

Conread position: 1-108
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 75

Conread position: 1-139
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 1-142
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 75

Conread position: 1-150
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 21, 87

Conread position: 1-152
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 21, 80

Conread position: 1-152
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 21, 8

Conread position: 1-153
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 75

Conread position: 1-153
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 27

Conread position: 1-161
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 75

Conread position: 1-162
Cow position:
Alignm length: 168
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 87

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 68

Conread position: 1-167
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 79

Conread position: 1-167
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 21, 75

Conread position: 1-169
Cow position:
Alignm length: 170
Alignm identity: 137
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 74

Conread position: 1-173
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 21, 80

Conread position: 1-174
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 74

Conread position: 1-195
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 42

Conread position: 1-205
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 87

Conread position: 1-212
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 75

Conread position: 1-218
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 21, 135

Conread position: 1-233
Cow position:
Alignm length: 234
Alignm identity: 175
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 21, 68

Conread position: 1-235
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 21, 80

Conread position: 1-237
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 75

Conread position: 1-240
Cow position:
Alignm length: 242
Alignm identity: 177
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 60

Conread position: 1-240
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 60

Conread position: 1-246
Cow position:
Alignm length: 255
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 1-255
Cow position:
Alignm length: 261
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 79

Conread position: 1-262
Cow position:
Alignm length: 264
Alignm identity: 181
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 21, 76

Conread position: 1-267
Cow position:
Alignm length: 276
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-277
Cow position:
Alignm length: 278
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-288
Cow position:
Alignm length: 292
Alignm identity: 214
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 75

Conread position: 1-289
Cow position:
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-289
Cow position:
Alignm length: 299
Alignm identity: 200
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 65

Conread position: 1-290
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 73

Conread position: 1-290
Cow position:
Alignm length: 291
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-291
Cow position:
Alignm length: 292
Alignm identity: 195
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 21, 87

Conread position: 1-291
Cow position:
Alignm length: 292
Alignm identity: 205
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 22, 87

Conread position: 1-291
Cow position:
Alignm length: 293
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-292
Cow position:
Alignm length: 297
Alignm identity: 208
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 21, 61

Conread position: 1-292
Cow position:
Alignm length: 296
Alignm identity: 199
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 52

Conread position: 1-293
Cow position:
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-293
Cow position:
Alignm length: 299
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-293
Cow position:
Alignm length: 293
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 1-293
Cow position:
Alignm length: 294
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 299
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 95

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 87

Conread position: 1-296
Cow position:
Alignm length: 315
Alignm identity: 226
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 231

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 80

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 76

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 53

Conread position: 1-296
Cow position:
Alignm length: 299
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 77

Conread position: 1-296
Cow position:
Alignm length: 299
Alignm identity: 215
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 207
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 21, 13

Conread position: 1-296
Cow position:
Alignm length: 296
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 87

Conread position: 1-296
Cow position:
Alignm length: 296
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 60

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 60

Conread position: 1-296
Cow position:
Alignm length: 299
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 97

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 207
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 21, 81

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 10

Conread position: 1-296
Cow position:
Alignm length: 299
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 89

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 206
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 75

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 80

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 214
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 28

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 60

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 60

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position:
Alignm length: 302
Alignm identity: 201
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 21, 102

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 22, 42

Conread position: 1-296
Cow position:
Alignm length: 296
Alignm identity: 204
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-297
Cow position:
Alignm length: 298
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-297
Cow position:
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 1-301
Cow position:
Alignm length: 304
Alignm identity: 207
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 44, 21

Conread position: 1-302
Cow position:
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-302
Cow position:
Alignm length: 306
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-302
Cow position:
Alignm length: 304
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 17

Conread position: 1-302
Cow position:
Alignm length: 304
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 17

Conread position: 1-303
Cow position:
Alignm length: 307
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 21

Conread position: 1-304
Cow position:
Alignm length: 312
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-304
Cow position:
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 83

Conread position: 1-304
Cow position:
Alignm length: 306
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 74

Conread position: 1-305
Cow position:
Alignm length: 306
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 66

Conread position: 1-305
Cow position:
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-305
Cow position:
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 68

Conread position: 2-148
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 73

Conread position: 2-168
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 61

Conread position: 2-168
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 67

Conread position: 2-192
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 75

Conread position: 2-206
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 42

Conread position: 2-277
Cow position:
Alignm length: 277
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 73

Conread position: 2-293
Cow position:
Alignm length: 294
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 73

Conread position: 2-293
Cow position:
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 73

Conread position: 2-296
Cow position:
Alignm length: 296
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 86

Conread position: 2-296
Cow position:
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 2-296
Cow position:
Alignm length: 312
Alignm identity: 218
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 15, 73

Conread position: 2-296
Cow position:
Alignm length: 296
Alignm identity: 206
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 63

Conread position: 2-296
Cow position:
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 86

Conread position: 2-300
Cow position:
Alignm length: 300
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 74

Conread position: 2-304
Cow position:
Alignm length: 308
Alignm identity: 226
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 20, 74

Conread position: 2-304
Cow position:
Alignm length: 306
Alignm identity: 209
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 21, 74

Conread position: 3-142
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 72

Conread position: 3-283
Cow position:
Alignm length: 282
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 72

Conread position: 3-289
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 65, 19

Conread position: 3-296
Cow position:
Alignm length: 296
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 66

Conread position: 4-296
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 92

Conread position: 4-296
Cow position:
Alignm length: 296
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 55

Conread position: 5-236
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 69, 0

Conread position: 5-296
Cow position:
Alignm length: 297
Alignm identity: 211
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 73

Conread position: 11-260
Cow position:
Alignm length: 254
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 65

Conread position: 13-305
Cow position:
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 9

Conread position: 17-290
Cow position:
Alignm length: 275
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 212, 42

Conread position: 20-296
Cow position:
Alignm length: 284
Alignm identity: 199
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 33, 73

Conread position: 29-302
Cow position:
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 45

Conread position: 30-290
Cow position:
Alignm length: 263
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 157, 44

Conread position: 31-291
Cow position:
Alignm length: 261
Alignm identity: 188
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 43, 0

Conread position: 32-296
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 198, 55

Conread position: 35-296
Cow position:
Alignm length: 264
Alignm identity: 193
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 150, 9

Conread position: 36-302
Cow position:
Alignm length: 270
Alignm identity: 184
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 146, 49

Conread position: 39-302
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 83, 23

Conread position: 42-168
Cow position:
Alignm length: 130
Alignm identity: 112
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 42-293
Cow position:
Alignm length: 252
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 42-296
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 44-268
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 46-302
Cow position:
Alignm length: 258
Alignm identity: 173
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 251, 28

Conread position: 49-296
Cow position:
Alignm length: 248
Alignm identity: 176
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 62-286
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 69-285
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 201, 105

Conread position: 70-304
Cow position:
Alignm length: 236
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 60

Conread position: 84-258
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 84-296
Cow position:
Alignm length: 213
Alignm identity: 140
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 85-296
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 87-284
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.