Cow genome map

Conread name: rfhi4033b_e23.y1

Conread position: 1-109
Cow position:
Alignm length: 110
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 42

Conread position: 1-124
Cow position:
Alignm length: 125
Alignm identity: 101
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 21, 75

Conread position: 1-148
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 42

Conread position: 1-148
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 115, 73

Conread position: 1-149
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 87

Conread position: 1-150
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 21, 80

Conread position: 1-151
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 19, 74

Conread position: 1-152
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 80

Conread position: 1-152
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 75

Conread position: 1-153
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 68

Conread position: 1-153
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 85

Conread position: 1-166
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 75

Conread position: 1-167
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 60

Conread position: 1-167
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 31

Conread position: 1-172
Cow position:
Alignm length: 173
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 66

Conread position: 1-202
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 78

Conread position: 1-218
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 49

Conread position: 1-229
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 57

Conread position: 1-231
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 75

Conread position: 1-233
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 75

Conread position: 1-240
Cow position:
Alignm length: 241
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 87

Conread position: 1-246
Cow position:
Alignm length: 249
Alignm identity: 188
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 75

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 73, 0

Conread position: 1-258
Cow position:
Alignm length: 260
Alignm identity: 188
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 21, 80

Conread position: 1-260
Cow position:
Alignm length: 261
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-260
Cow position:
Alignm length: 262
Alignm identity: 187
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 80

Conread position: 1-266
Cow position:
Alignm length: 268
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 236

Conread position: 1-267
Cow position:
Alignm length: 269
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 88

Conread position: 1-267
Cow position:
Alignm length: 270
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 65

Conread position: 1-270
Cow position:
Alignm length: 271
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 74

Conread position: 1-274
Cow position:
Alignm length: 275
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-284
Cow position:
Alignm length: 286
Alignm identity: 203
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 21, 87

Conread position: 1-284
Cow position:
Alignm length: 286
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 87

Conread position: 1-286
Cow position:
Alignm length: 292
Alignm identity: 188
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 75

Conread position: 1-288
Cow position:
Alignm length: 292
Alignm identity: 204
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 56, 179

Conread position: 1-288
Cow position:
Alignm length: 290
Alignm identity: 204
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 87

Conread position: 1-290
Cow position:
Alignm length: 291
Alignm identity: 204
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 22, 80

Conread position: 1-290
Cow position:
Alignm length: 291
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-291
Cow position:
Alignm length: 293
Alignm identity: 202
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 75

Conread position: 1-291
Cow position:
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 74

Conread position: 1-292
Cow position:
Alignm length: 292
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-292
Cow position:
Alignm length: 292
Alignm identity: 204
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 19, 0

Conread position: 1-292
Cow position:
Alignm length: 294
Alignm identity: 194
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 21, 216

Conread position: 1-293
Cow position:
Alignm length: 294
Alignm identity: 209
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 80

Conread position: 1-293
Cow position:
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-293
Cow position:
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 87

Conread position: 1-294
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position:
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 208
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 48

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 205
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 21, 57

Conread position: 1-296
Cow position:
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position:
Alignm length: 296
Alignm identity: 209
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 74, 0

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 21, 39

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 95

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 205
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 23, 96

Conread position: 1-296
Cow position:
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 111

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 207
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 71

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 95

Conread position: 1-296
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-296
Cow position:
Alignm length: 305
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 80

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 85

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 73

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 86

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 87

Conread position: 1-296
Cow position:
Alignm length: 296
Alignm identity: 210
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 48, 0

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 87

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position:
Alignm length: 303
Alignm identity: 215
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 296
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 186, 21

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 87

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 21, 42

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 87

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 206
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 95

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 95

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-302
Cow position:
Alignm length: 304
Alignm identity: 212
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 83

Conread position: 1-302
Cow position:
Alignm length: 306
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 73

Conread position: 1-303
Cow position:
Alignm length: 305
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 80

Conread position: 1-304
Cow position:
Alignm length: 306
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 66

Conread position: 1-304
Cow position:
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 76

Conread position: 1-304
Cow position:
Alignm length: 307
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 49

Conread position: 2-152
Cow position:
Alignm length: 152
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 20, 74

Conread position: 2-152
Cow position:
Alignm length: 153
Alignm identity: 121
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 21, 71

Conread position: 2-152
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 74

Conread position: 2-163
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 73

Conread position: 2-213
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 21, 178

Conread position: 2-254
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 97

Conread position: 2-260
Cow position:
Alignm length: 260
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 67

Conread position: 2-291
Cow position:
Alignm length: 293
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 169

Conread position: 2-293
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 79

Conread position: 2-296
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 20, 74

Conread position: 3-167
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 19, 85

Conread position: 3-212
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 19, 73

Conread position: 3-290
Cow position:
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 85

Conread position: 3-291
Cow position:
Alignm length: 291
Alignm identity: 188
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 83

Conread position: 3-291
Cow position:
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 78

Conread position: 3-292
Cow position:
Alignm length: 291
Alignm identity: 209
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 19, 73

Conread position: 3-296
Cow position:
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 78

Conread position: 3-296
Cow position:
Alignm length: 301
Alignm identity: 205
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 19, 51

Conread position: 4-160
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 4-296
Cow position:
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 71

Conread position: 8-296
Cow position:
Alignm length: 290
Alignm identity: 203
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 14, 78

Conread position: 13-296
Cow position:
Alignm length: 285
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 45

Conread position: 20-296
Cow position:
Alignm length: 277
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 20-296
Cow position:
Alignm length: 280
Alignm identity: 201
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 167, 54

Conread position: 20-296
Cow position:
Alignm length: 278
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 55

Conread position: 22-289
Cow position:
Alignm length: 268
Alignm identity: 187
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 23-303
Cow position:
Alignm length: 282
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 72

Conread position: 26-296
Cow position:
Alignm length: 272
Alignm identity: 191
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 142, 61

Conread position: 29-293
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 35-296
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 33, 0

Conread position: 43-296
Cow position:
Alignm length: 258
Alignm identity: 188
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 137, 44

Conread position: 72-293
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 75-304
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 222, 54

Conread position: 93-296
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 172, 189

Conread position: 101-287
Cow position:
Alignm length: 190
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 10

Show alignments to all cow chromosomes.