Cow genome map

Conread name: rfhi4033b_e23.y1

Conread position: 1-152
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 21, 87

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 22, 42

Conread position: 1-160
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 75

Conread position: 1-167
Cow position:
Alignm length: 178
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 82

Conread position: 1-167
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 1-167
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 80

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 75

Conread position: 1-172
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 96

Conread position: 1-181
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 68

Conread position: 1-183
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 7

Conread position: 1-186
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 75

Conread position: 1-189
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 21, 113

Conread position: 1-196
Cow position:
Alignm length: 197
Alignm identity: 155
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 21, 80

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 75

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 75

Conread position: 1-208
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 21, 63

Conread position: 1-209
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 42

Conread position: 1-218
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 21, 0

Conread position: 1-221
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 22, 60

Conread position: 1-222
Cow position:
Alignm length: 226
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 27

Conread position: 1-222
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 87

Conread position: 1-229
Cow position:
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 74

Conread position: 1-254
Cow position:
Alignm length: 263
Alignm identity: 174
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 97

Conread position: 1-260
Cow position:
Alignm length: 269
Alignm identity: 194
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 21, 74

Conread position: 1-267
Cow position:
Alignm length: 268
Alignm identity: 190
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 52

Conread position: 1-267
Cow position:
Alignm length: 269
Alignm identity: 197
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 21, 74

Conread position: 1-289
Cow position:
Alignm length: 290
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 75

Conread position: 1-289
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 11, 76

Conread position: 1-290
Cow position:
Alignm length: 291
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 42

Conread position: 1-291
Cow position:
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-291
Cow position:
Alignm length: 295
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 87

Conread position: 1-291
Cow position:
Alignm length: 293
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 33

Conread position: 1-291
Cow position:
Alignm length: 291
Alignm identity: 206
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 15, 0

Conread position: 1-292
Cow position:
Alignm length: 294
Alignm identity: 186
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 49

Conread position: 1-292
Cow position:
Alignm length: 294
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-293
Cow position:
Alignm length: 294
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 85

Conread position: 1-293
Cow position:
Alignm length: 296
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 67

Conread position: 1-293
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 21, 75

Conread position: 1-293
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 312
Alignm identity: 219
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position:
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 95

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 95

Conread position: 1-296
Cow position:
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 208
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 21, 42

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 305
Alignm identity: 209
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 50

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 39

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 50

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 60

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 210
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 208
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 87

Conread position: 1-302
Cow position:
Alignm length: 305
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 38

Conread position: 1-302
Cow position:
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 58

Conread position: 1-302
Cow position:
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-304
Cow position:
Alignm length: 307
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 10

Conread position: 1-304
Cow position:
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-304
Cow position:
Alignm length: 307
Alignm identity: 208
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 75

Conread position: 1-304
Cow position:
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 68

Conread position: 1-304
Cow position:
Alignm length: 306
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-305
Cow position:
Alignm length: 315
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 85

Conread position: 1-305
Cow position:
Alignm length: 310
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-305
Cow position:
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 252

Conread position: 1-305
Cow position:
Alignm length: 306
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 74

Conread position: 1-305
Cow position:
Alignm length: 308
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 76

Conread position: 2-154
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 74

Conread position: 2-172
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 73

Conread position: 2-225
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 86

Conread position: 2-247
Cow position:
Alignm length: 247
Alignm identity: 169
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 79

Conread position: 2-247
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 79

Conread position: 2-265
Cow position:
Alignm length: 265
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 52

Conread position: 2-267
Cow position:
Alignm length: 266
Alignm identity: 187
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 65, 0

Conread position: 2-291
Cow position:
Alignm length: 291
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 86

Conread position: 2-293
Cow position:
Alignm length: 294
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 66

Conread position: 2-296
Cow position:
Alignm length: 296
Alignm identity: 209
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 20, 74

Conread position: 3-222
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 83

Conread position: 3-230
Cow position:
Alignm length: 229
Alignm identity: 155
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 19, 73

Conread position: 3-266
Cow position:
Alignm length: 266
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 3-284
Cow position:
Alignm length: 285
Alignm identity: 189
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 27, 94

Conread position: 3-296
Cow position:
Alignm length: 296
Alignm identity: 197
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 56

Conread position: 3-296
Cow position:
Alignm length: 295
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 85

Conread position: 3-301
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 19, 46

Conread position: 4-215
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 17, 71

Conread position: 5-171
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 100

Conread position: 5-265
Cow position:
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 5-289
Cow position:
Alignm length: 288
Alignm identity: 200
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 71

Conread position: 8-290
Cow position:
Alignm length: 284
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 67

Conread position: 17-304
Cow position:
Alignm length: 290
Alignm identity: 188
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 175, 11

Conread position: 20-164
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 20-248
Cow position:
Alignm length: 229
Alignm identity: 173
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 36-296
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 95, 39

Conread position: 39-291
Cow position:
Alignm length: 257
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 36

Conread position: 44-296
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 43, 0

Conread position: 44-301
Cow position:
Alignm length: 260
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 13

Conread position: 50-169
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 68-305
Cow position:
Alignm length: 239
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 0

Conread position: 78-259
Cow position:
Alignm length: 182
Alignm identity: 144
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 9, 0

Conread position: 81-292
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 90, 96

Conread position: 84-195
Cow position:
Alignm length: 113
Alignm identity: 95
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 32, 27

Show alignments to all cow chromosomes.