Cow genome map

Conread name: rfhi4033b_e23.y1

Conread position: 1-109
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 75

Conread position: 1-125
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 75

Conread position: 1-140
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 74

Conread position: 1-141
Cow position:
Alignm length: 142
Alignm identity: 104
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 21, 87

Conread position: 1-144
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 80

Conread position: 1-146
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 75

Conread position: 1-151
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 75

Conread position: 1-152
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 1-152
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 21, 87

Conread position: 1-152
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 21, 75

Conread position: 1-160
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 74

Conread position: 1-167
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 22, 75

Conread position: 1-167
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 87

Conread position: 1-182
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 74

Conread position: 1-187
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 21, 42

Conread position: 1-203
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 23, 75

Conread position: 1-209
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 1-228
Cow position:
Alignm length: 228
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 1-254
Cow position:
Alignm length: 256
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 1-263
Cow position:
Alignm length: 264
Alignm identity: 179
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 21, 75

Conread position: 1-267
Cow position:
Alignm length: 268
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 87

Conread position: 1-267
Cow position:
Alignm length: 268
Alignm identity: 182
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 74

Conread position: 1-274
Cow position:
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 68

Conread position: 1-288
Cow position:
Alignm length: 290
Alignm identity: 204
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 21, 80

Conread position: 1-289
Cow position:
Alignm length: 291
Alignm identity: 205
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 21, 95

Conread position: 1-290
Cow position:
Alignm length: 298
Alignm identity: 203
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 106

Conread position: 1-290
Cow position:
Alignm length: 291
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 75

Conread position: 1-291
Cow position:
Alignm length: 292
Alignm identity: 196
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 22, 80

Conread position: 1-291
Cow position:
Alignm length: 292
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-291
Cow position:
Alignm length: 293
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 68

Conread position: 1-291
Cow position:
Alignm length: 293
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 75

Conread position: 1-291
Cow position:
Alignm length: 292
Alignm identity: 204
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 16, 75

Conread position: 1-291
Cow position:
Alignm length: 292
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 10

Conread position: 1-291
Cow position:
Alignm length: 294
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 75

Conread position: 1-291
Cow position:
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 68

Conread position: 1-293
Cow position:
Alignm length: 294
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-293
Cow position:
Alignm length: 294
Alignm identity: 201
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 20, 60

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 296
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 204
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 208
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position:
Alignm length: 304
Alignm identity: 203
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 22, 42

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 85

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 75

Conread position: 1-296
Cow position:
Alignm length: 317
Alignm identity: 218
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 54, 19

Conread position: 1-296
Cow position:
Alignm length: 299
Alignm identity: 211
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 75

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 74

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 48

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 205
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 75

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 27, 48

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 97

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 207
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 95

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 86

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 97

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 75

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 205
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position:
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-296
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 63, 21

Conread position: 1-296
Cow position:
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 87

Conread position: 1-296
Cow position:
Alignm length: 299
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 61

Conread position: 1-302
Cow position:
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 205

Conread position: 1-302
Cow position:
Alignm length: 303
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-304
Cow position:
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-304
Cow position:
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-304
Cow position:
Alignm length: 308
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-304
Cow position:
Alignm length: 305
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 79

Conread position: 1-305
Cow position:
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 77

Conread position: 1-305
Cow position:
Alignm length: 307
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 2-109
Cow position:
Alignm length: 109
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 73

Conread position: 2-141
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 65

Conread position: 2-147
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 2-153
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 20, 47

Conread position: 2-246
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 20, 74

Conread position: 2-290
Cow position:
Alignm length: 293
Alignm identity: 209
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 74

Conread position: 2-296
Cow position:
Alignm length: 296
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 73

Conread position: 2-296
Cow position:
Alignm length: 296
Alignm identity: 205
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 79

Conread position: 3-285
Cow position:
Alignm length: 285
Alignm identity: 189
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 15, 85

Conread position: 3-292
Cow position:
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 19

Conread position: 3-296
Cow position:
Alignm length: 297
Alignm identity: 203
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 20, 84

Conread position: 3-296
Cow position:
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 72

Conread position: 3-300
Cow position:
Alignm length: 299
Alignm identity: 201
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 73

Conread position: 3-300
Cow position:
Alignm length: 302
Alignm identity: 202
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 19, 73

Conread position: 3-302
Cow position:
Alignm length: 302
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 73

Conread position: 3-303
Cow position:
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 72

Conread position: 3-304
Cow position:
Alignm length: 304
Alignm identity: 207
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 73

Conread position: 4-266
Cow position:
Alignm length: 264
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 72

Conread position: 4-293
Cow position:
Alignm length: 291
Alignm identity: 206
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 84

Conread position: 4-303
Cow position:
Alignm length: 314
Alignm identity: 220
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 57

Conread position: 5-229
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 18, 203

Conread position: 5-296
Cow position:
Alignm length: 294
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 83

Conread position: 6-296
Cow position:
Alignm length: 292
Alignm identity: 206
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 16, 70

Conread position: 11-296
Cow position:
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 64

Conread position: 20-296
Cow position:
Alignm length: 282
Alignm identity: 198
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 62, 40

Conread position: 22-296
Cow position:
Alignm length: 277
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 65

Conread position: 26-296
Cow position:
Alignm length: 272
Alignm identity: 190
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 119, 54

Conread position: 29-162
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 30-267
Cow position:
Alignm length: 243
Alignm identity: 168
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 8, 19

Conread position: 30-296
Cow position:
Alignm length: 268
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 144, 26

Conread position: 34-305
Cow position:
Alignm length: 274
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 40

Conread position: 42-296
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 45, 0

Conread position: 44-169
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 68-237
Cow position:
Alignm length: 172
Alignm identity: 137
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 51, 0

Conread position: 75-186
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 76-301
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 86-296
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 146, 0

Conread position: 86-296
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 94-246
Cow position:
Alignm length: 153
Alignm identity: 123
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 101-296
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.