Cow genome map


           Conread name:
           rfhi4033b_e23.y1
        

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-161
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-163
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 95
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               22, 74
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               14, 80
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               21, 80
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               21, 75
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               21, 37
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               39, 24
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               21, 223
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 75
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 68
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               21, 79
               

               Conread position:
               1-288
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               22, 67
               

               Conread position:
               1-288
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               21, 44
               

               Conread position:
               1-289
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 74
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 75
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               22, 75
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 75
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 80
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 75
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               186, 14
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 75
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 87
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 14
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 84
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 87
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               21, 46
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 42
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 87
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 60
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               20, 75
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               21, 80
               

               Conread position:
               1-301
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 76
               

               Conread position:
               1-303
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               1-303
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               1-303
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 38
               

               Conread position:
               1-304
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               2-131
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               2-287
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               21, 66
               

               Conread position:
               2-288
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               21, 160
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               20, 79
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               20, 86
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               3-152
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 65
               

               Conread position:
               3-254
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 72
               

               Conread position:
               3-267
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               19, 151
               

               Conread position:
               3-296
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 73
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 72
               

               Conread position:
               3-304
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 73
               

               Conread position:
               3-305
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 51
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               19, 71
               

               Conread position:
               5-265
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 72
               

               Conread position:
               22-267
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               100, 40
               

               Conread position:
               22-296
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               100, 30
               

               Conread position:
               22-303
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 15
               

               Conread position:
               33-291
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               45-296
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               52-304
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               103, 23
               

               Conread position:
               72-304
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               70, 104
               

               Conread position:
               83-296
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 96
               

               Conread position:
               87-296
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               96-291
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               74, 165
               

               Conread position:
               115-302
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               123, 190
               
Show alignments to all cow chromosomes.