Cow genome map
| Conread name: | rfhi4033b_e23.y1 |
| Conread position: | 1-150 |
| Cow position: | chr26:16719960-16719809 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 77 |
| Conread position: | 1-162 |
| Cow position: | chr26:3185092-3184934 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 107 |
| Conread position: | 1-165 |
| Cow position: | chr26:16864758-16864594 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 1-167 |
| Cow position: | chr26:3097165-3097331 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 1-225 |
| Cow position: | chr26:30725433-30725658 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 1-227 |
| Cow position: | chr26:17169314-17169088 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 1-230 |
| Cow position: | chr26:30786411-30786184 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 1-242 |
| Cow position: | chr26:16905401-16905154 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 225 |
| Conread position: | 1-247 |
| Cow position: | chr26:6476193-6476436 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 21, 75 |
| Conread position: | 1-247 |
| Cow position: | chr26:29433716-29433470 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 1-252 |
| Cow position: | chr26:6030507-6030745 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 21, 76 |
| Conread position: | 1-253 |
| Cow position: | chr26:35393612-35393865 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 76 |
| Conread position: | 1-266 |
| Cow position: | chr26:14173547-14173280 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 75 |
| Conread position: | 1-280 |
| Cow position: | chr26:9835955-9835673 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 75 |
| Conread position: | 1-285 |
| Cow position: | chr26:22831555-22831836 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 1-289 |
| Cow position: | chr26:800162-799877 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 21, 85 |
| Conread position: | 1-289 |
| Cow position: | chr26:27432253-27432537 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 133 |
| Conread position: | 1-290 |
| Cow position: | chr26:1013055-1012771 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 1-291 |
| Cow position: | chr26:3187240-3186954 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 21, 29 |
| Conread position: | 1-292 |
| Cow position: | chr26:8084310-8084019 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 1-292 |
| Cow position: | chr26:23591179-23590888 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 1-293 |
| Cow position: | chr26:3700443-3700163 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 17, 73 |
| Conread position: | 1-296 |
| Cow position: | chr26:387164-386869 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 85 |
| Conread position: | 1-296 |
| Cow position: | chr26:1390466-1390170 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 1-296 |
| Cow position: | chr26:1885494-1885201 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 22, 73 |
| Conread position: | 1-296 |
| Cow position: | chr26:1915823-1915531 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-296 |
| Cow position: | chr26:2202012-2201719 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 95 |
| Conread position: | 1-296 |
| Cow position: | chr26:3556634-3556909 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 1-296 |
| Cow position: | chr26:4324237-4324519 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 21, 66 |
| Conread position: | 1-296 |
| Cow position: | chr26:5680016-5679719 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-296 |
| Cow position: | chr26:6430067-6429775 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 1-296 |
| Cow position: | chr26:6843736-6844031 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 1-296 |
| Cow position: | chr26:8738933-8739228 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 1-296 |
| Cow position: | chr26:12585054-12585349 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 1-296 |
| Cow position: | chr26:14487777-14488066 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 75 |
| Conread position: | 1-296 |
| Cow position: | chr26:15199511-15199217 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 99 |
| Conread position: | 1-296 |
| Cow position: | chr26:21350985-21350694 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 28, 74 |
| Conread position: | 1-296 |
| Cow position: | chr26:22691870-22691579 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 1-296 |
| Cow position: | chr26:23889891-23889601 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-296 |
| Cow position: | chr26:26286344-26286048 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 169 |
| Conread position: | 1-296 |
| Cow position: | chr26:31138466-31138757 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 1-296 |
| Cow position: | chr26:35121759-35122053 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-296 |
| Cow position: | chr26:35191064-35191358 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 1-296 |
| Cow position: | chr26:35423981-35423688 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 95 |
| Conread position: | 1-302 |
| Cow position: | chr26:624733-625023 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 22, 67 |
| Conread position: | 1-304 |
| Cow position: | chr26:30585874-30586165 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 1-305 |
| Cow position: | chr26:16781659-16781360 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 74 |
| Conread position: | 1-305 |
| Cow position: | chr26:24239183-24238885 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 143 |
| Conread position: | 2-296 |
| Cow position: | chr26:1621130-1620844 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 2-296 |
| Cow position: | chr26:13773534-13773242 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 74 |
| Conread position: | 2-296 |
| Cow position: | chr26:17393416-17393706 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 2-296 |
| Cow position: | chr26:20256106-20255818 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 73 |
| Conread position: | 3-250 |
| Cow position: | chr26:11269703-11269457 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 73 |
| Conread position: | 3-263 |
| Cow position: | chr26:8308271-8308542 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 3-291 |
| Cow position: | chr26:783773-784068 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 73 |
| Conread position: | 3-302 |
| Cow position: | chr26:19795537-19795235 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 74 |
| Conread position: | 3-304 |
| Cow position: | chr26:46168-46470 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 79 |
| Conread position: | 4-121 |
| Cow position: | chr26:6837102-6836985 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 18, 71 |
| Conread position: | 8-266 |
| Cow position: | chr26:3924005-3924260 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 15, 50 |
| Conread position: | 8-296 |
| Cow position: | chr26:6038217-6038493 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 14, 68 |
| Conread position: | 11-162 |
| Cow position: | chr26:20746712-20746565 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 6 |
| Conread position: | 14-282 |
| Cow position: | chr26:2740139-2740407 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 16, 62 |
| Conread position: | 20-296 |
| Cow position: | chr26:9558416-9558691 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 20-303 |
| Cow position: | chr26:17327629-17327343 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 75, 149 |
| Conread position: | 23-292 |
| Cow position: | chr26:18800703-18800966 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 116, 62 |
| Conread position: | 30-289 |
| Cow position: | chr26:30625160-30625416 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 30-296 |
| Cow position: | chr26:23809972-23810234 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 130, 50 |
| Conread position: | 34-297 |
| Cow position: | chr26:8356053-8356311 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 88, 53 |
| Conread position: | 43-296 |
| Cow position: | chr26:20186752-20186511 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 32, 0 |
Show alignments to all cow chromosomes.