Cow genome map

Conread name: rfhi4033b_e23.y1

Conread position: 1-123
Cow position: chr3:77366337-77366459 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 21, 74

Conread position: 1-136
Cow position: chr3:9639644-9639778 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 74

Conread position: 1-141
Cow position: chr3:60891634-60891491 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 21, 134

Conread position: 1-141
Cow position: chr3:67545270-67545409 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 42

Conread position: 1-143
Cow position: chr3:37040660-37040516 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 75

Conread position: 1-151
Cow position: chr3:65178740-65178591 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 75

Conread position: 1-152
Cow position: chr3:4161092-4161237 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 74

Conread position: 1-157
Cow position: chr3:18252912-18252761 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 74

Conread position: 1-159
Cow position: chr3:21100173-21100017 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 96

Conread position: 1-163
Cow position: chr3:73811445-73811282 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 76

Conread position: 1-167
Cow position: chr3:13360817-13360651 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 21, 87

Conread position: 1-167
Cow position: chr3:16156892-16156727 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 75

Conread position: 1-167
Cow position: chr3:19958964-19958798 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 97

Conread position: 1-167
Cow position: chr3:36595068-36594902 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 87

Conread position: 1-167
Cow position: chr3:73763262-73763427 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 21, 75

Conread position: 1-167
Cow position: chr3:77472620-77472785 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 1-168
Cow position: chr3:13291474-13291308 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 21, 74

Conread position: 1-172
Cow position: chr3:18460326-18460496 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 1-176
Cow position: chr3:57835282-57835453 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 74

Conread position: 1-179
Cow position: chr3:67745402-67745589 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 21, 82

Conread position: 1-182
Cow position: chr3:521944-521765 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1-190
Cow position: chr3:59607661-59607470 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 84

Conread position: 1-211
Cow position: chr3:76136691-76136478 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 20, 0

Conread position: 1-224
Cow position: chr3:14633872-14634084 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 75

Conread position: 1-224
Cow position: chr3:46006462-46006250 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 76

Conread position: 1-225
Cow position: chr3:39921576-39921799 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 21, 87

Conread position: 1-231
Cow position: chr3:17460586-17460361 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 21, 74

Conread position: 1-234
Cow position: chr3:24432751-24432518 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 21, 87

Conread position: 1-236
Cow position: chr3:11784729-11784498 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 21, 76

Conread position: 1-237
Cow position: chr3:20999702-20999938 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 68

Conread position: 1-237
Cow position: chr3:51235134-51235358 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 1-240
Cow position: chr3:4017871-4017637 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-240
Cow position: chr3:49429400-49429623 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 1-243
Cow position: chr3:33254492-33254731 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 21, 75

Conread position: 1-243
Cow position: chr3:58766513-58766271 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-246
Cow position: chr3:37600100-37599861 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 21, 80

Conread position: 1-248
Cow position: chr3:10371741-10371499 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 50

Conread position: 1-251
Cow position: chr3:69271971-69271721 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 21, 87

Conread position: 1-252
Cow position: chr3:64655574-64655329 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 17, 0

Conread position: 1-253
Cow position: chr3:7677859-7677611 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 66

Conread position: 1-253
Cow position: chr3:19947569-19947326 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 1-257
Cow position: chr3:52651585-52651827 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-259
Cow position: chr3:70322305-70322561 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 74

Conread position: 1-261
Cow position: chr3:31050653-31050893 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 20, 62

Conread position: 1-262
Cow position: chr3:17059098-17059344 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 21, 74

Conread position: 1-262
Cow position: chr3:58129461-58129199 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 22, 67

Conread position: 1-266
Cow position: chr3:14280049-14279789 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 21, 75

Conread position: 1-267
Cow position: chr3:8391725-8391469 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-267
Cow position: chr3:37451471-37451204 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 22, 68

Conread position: 1-267
Cow position: chr3:38869936-38869671 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 21, 87

Conread position: 1-267
Cow position: chr3:46683203-46682937 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 87

Conread position: 1-267
Cow position: chr3:64281951-64282212 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-267
Cow position: chr3:74403289-74403029 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 75

Conread position: 1-268
Cow position: chr3:23010725-23010457 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 87

Conread position: 1-274
Cow position: chr3:2117815-2117543 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 60

Conread position: 1-288
Cow position: chr3:34464733-34464450 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-288
Cow position: chr3:40101489-40101769 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-288
Cow position: chr3:64171609-64171329 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-289
Cow position: chr3:173874-173588 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 21, 74

Conread position: 1-289
Cow position: chr3:12673009-12673293 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 59

Conread position: 1-289
Cow position: chr3:18759039-18759340 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 30, 42

Conread position: 1-289
Cow position: chr3:36671248-36671538 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-289
Cow position: chr3:39214745-39214454 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 22, 77

Conread position: 1-289
Cow position: chr3:76187908-76187621 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 75

Conread position: 1-290
Cow position: chr3:2904088-2904362 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 21, 74

Conread position: 1-290
Cow position: chr3:3031601-3031320 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 74

Conread position: 1-290
Cow position: chr3:18575255-18575526 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 31

Conread position: 1-290
Cow position: chr3:24585862-24586155 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 241, 73

Conread position: 1-290
Cow position: chr3:34086833-34087117 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 95, 21

Conread position: 1-290
Cow position: chr3:66887828-66888115 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-291
Cow position: chr3:19108927-19108639 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 21, 43

Conread position: 1-291
Cow position: chr3:45691681-45691958 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 22, 58

Conread position: 1-291
Cow position: chr3:52257156-52257435 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-291
Cow position: chr3:58950829-58950541 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 19, 34

Conread position: 1-291
Cow position: chr3:75771765-75772055 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-292
Cow position: chr3:1483396-1483108 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 195
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 22, 35

Conread position: 1-292
Cow position: chr3:46753216-46752925 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 75

Conread position: 1-292
Cow position: chr3:59603171-59602880 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 21, 80

Conread position: 1-292
Cow position: chr3:75997519-75997810 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-293
Cow position: chr3:5887253-5886964 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 21, 49

Conread position: 1-293
Cow position: chr3:10244029-10243737 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-293
Cow position: chr3:13311632-13311928 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 21, 97

Conread position: 1-293
Cow position: chr3:16657505-16657789 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 75

Conread position: 1-293
Cow position: chr3:32221080-32220800 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 42

Conread position: 1-293
Cow position: chr3:34557008-34557292 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 85

Conread position: 1-293
Cow position: chr3:42186838-42186547 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 48

Conread position: 1-293
Cow position: chr3:48603631-48603330 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 19, 104

Conread position: 1-296
Cow position: chr3:226521-226801 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position: chr3:579542-579249 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:597477-597184 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 95

Conread position: 1-296
Cow position: chr3:2791117-2790826 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 1-296
Cow position: chr3:2834169-2834464 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:2851876-2852162 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 28

Conread position: 1-296
Cow position: chr3:3552686-3552397 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:4039560-4039857 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 79

Conread position: 1-296
Cow position: chr3:6442438-6442143 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 85

Conread position: 1-296
Cow position: chr3:6785686-6785392 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position: chr3:6865028-6864735 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:6897196-6896901 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 68

Conread position: 1-296
Cow position: chr3:7245736-7246029 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:7476550-7476845 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 88

Conread position: 1-296
Cow position: chr3:11384682-11384393 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:12797692-12797976 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 22, 87

Conread position: 1-296
Cow position: chr3:13723342-13723637 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 97

Conread position: 1-296
Cow position: chr3:14285103-14284810 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-296
Cow position: chr3:14680457-14680162 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:14864252-14863959 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position: chr3:15663079-15663369 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 140

Conread position: 1-296
Cow position: chr3:16226244-16225952 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:18814875-18814581 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:19216270-19215991 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 22, 145

Conread position: 1-296
Cow position: chr3:19794722-19795017 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-296
Cow position: chr3:20379349-20379642 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:20475877-20475589 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:21178887-21179184 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 88

Conread position: 1-296
Cow position: chr3:23204307-23204599 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 88

Conread position: 1-296
Cow position: chr3:23497388-23497683 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 75

Conread position: 1-296
Cow position: chr3:24442733-24443028 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 95

Conread position: 1-296
Cow position: chr3:25057050-25056767 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 22, 42

Conread position: 1-296
Cow position: chr3:26722442-26722737 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:26742503-26742798 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:27454567-27454858 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 74

Conread position: 1-296
Cow position: chr3:27867031-27866731 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 22, 29

Conread position: 1-296
Cow position: chr3:28435329-28435624 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:29573758-29574051 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 41

Conread position: 1-296
Cow position: chr3:30321626-30321332 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:31224645-31224353 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 75

Conread position: 1-296
Cow position: chr3:33124885-33125180 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:33269593-33269306 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 21, 39

Conread position: 1-296
Cow position: chr3:35619922-35619632 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 23, 87

Conread position: 1-296
Cow position: chr3:35884751-35885046 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position: chr3:36874691-36874986 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 95

Conread position: 1-296
Cow position: chr3:38096270-38095974 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:40049258-40048964 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:40520570-40520865 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:40826766-40826473 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 95

Conread position: 1-296
Cow position: chr3:42846714-42846423 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:44927183-44926889 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 17

Conread position: 1-296
Cow position: chr3:45977869-45977577 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position: chr3:46506138-46505843 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position: chr3:46857914-46858209 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 95

Conread position: 1-296
Cow position: chr3:47078243-47078538 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:47272509-47272805 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:47986809-47986514 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:49416477-49416773 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 87

Conread position: 1-296
Cow position: chr3:49907663-49907958 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:50204934-50204640 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:54653805-54654100 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:54863252-54863547 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 48

Conread position: 1-296
Cow position: chr3:55374445-55374160 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 22, 85

Conread position: 1-296
Cow position: chr3:56148665-56148367 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position: chr3:56160456-56160741 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 21, 74

Conread position: 1-296
Cow position: chr3:56297754-56297459 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 99

Conread position: 1-296
Cow position: chr3:56644961-56645256 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:62793712-62794001 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-296
Cow position: chr3:63688542-63688835 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position: chr3:64024661-64024957 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 88

Conread position: 1-296
Cow position: chr3:64654038-64653743 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 97

Conread position: 1-296
Cow position: chr3:65473796-65473505 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 1-296
Cow position: chr3:65989279-65988996 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 21, 56

Conread position: 1-296
Cow position: chr3:66847033-66847318 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 29

Conread position: 1-296
Cow position: chr3:68696596-68696890 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 85

Conread position: 1-296
Cow position: chr3:68870380-68870675 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position: chr3:69930467-69930759 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:70913899-70914188 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 173, 74

Conread position: 1-296
Cow position: chr3:72174936-72175231 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:72669190-72669487 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 68

Conread position: 1-296
Cow position: chr3:73416368-73416072 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position: chr3:73450944-73451239 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:74060838-74060544 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 7

Conread position: 1-296
Cow position: chr3:75038472-75038767 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chr3:78024070-78024361 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 21, 0

Conread position: 1-296
Cow position: chr3:81101448-81101153 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-297
Cow position: chr3:30615571-30615863 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-300
Cow position: chr3:35918929-35918636 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-301
Cow position: chr3:36121545-36121246 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 95

Conread position: 1-301
Cow position: chr3:80872301-80872003 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 197
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 27, 74

Conread position: 1-302
Cow position: chr3:13248654-13248951 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 21, 97

Conread position: 1-302
Cow position: chr3:17937648-17937932 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 75

Conread position: 1-302
Cow position: chr3:56101619-56101332 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 202
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 80

Conread position: 1-303
Cow position: chr3:22352983-22352684 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 75

Conread position: 1-303
Cow position: chr3:43189903-43190203 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 39

Conread position: 1-303
Cow position: chr3:56718962-56719257 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 23, 74

Conread position: 1-303
Cow position: chr3:72633442-72633140 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 79

Conread position: 1-304
Cow position: chr3:8605544-8605839 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-304
Cow position: chr3:12676270-12676575 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 42

Conread position: 1-304
Cow position: chr3:16293547-16293843 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-304
Cow position: chr3:26920089-26919796 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 66

Conread position: 1-304
Cow position: chr3:37486680-37486976 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 68

Conread position: 1-304
Cow position: chr3:56103109-56102807 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-304
Cow position: chr3:61677904-61677604 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 73

Conread position: 1-304
Cow position: chr3:74847811-74848098 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-304
Cow position: chr3:77427044-77426760 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 294, 21

Conread position: 1-304
Cow position: chr3:77550338-77550035 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 21, 143

Conread position: 1-305
Cow position: chr3:3884817-3885132 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 42

Conread position: 1-305
Cow position: chr3:15082576-15082869 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-305
Cow position: chr3:24455164-24455453 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 49

Conread position: 1-305
Cow position: chr3:26567146-26566845 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-305
Cow position: chr3:37628255-37627956 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-305
Cow position: chr3:37982996-37983301 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 80

Conread position: 2-146
Cow position: chr3:1831492-1831633 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 27

Conread position: 2-152
Cow position: chr3:18184280-18184133 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 82

Conread position: 2-152
Cow position: chr3:47340768-47340923 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 2-168
Cow position: chr3:2507273-2507438 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 67

Conread position: 2-172
Cow position: chr3:61538968-61538804 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 20, 74

Conread position: 2-190
Cow position: chr3:45881106-45880924 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 154
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 20, 74

Conread position: 2-205
Cow position: chr3:60932634-60932433 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 74

Conread position: 2-211
Cow position: chr3:74391542-74391746 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 20, 47

Conread position: 2-242
Cow position: chr3:34392918-34393158 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 67

Conread position: 2-259
Cow position: chr3:44536603-44536876 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 2-288
Cow position: chr3:29582477-29582193 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 164

Conread position: 2-292
Cow position: chr3:13117693-13117974 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 20, 86

Conread position: 2-296
Cow position: chr3:5474908-5474614 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 86

Conread position: 2-296
Cow position: chr3:6689198-6688902 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 75

Conread position: 2-296
Cow position: chr3:31418903-31418611 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 11, 75

Conread position: 2-296
Cow position: chr3:42424132-42424419 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 79

Conread position: 2-296
Cow position: chr3:66968511-66968804 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 86

Conread position: 2-303
Cow position: chr3:2707505-2707802 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 20, 86

Conread position: 2-303
Cow position: chr3:33326758-33326449 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 282

Conread position: 2-304
Cow position: chr3:48273147-48272847 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 79

Conread position: 3-152
Cow position: chr3:22918890-22918741 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 73

Conread position: 3-152
Cow position: chr3:48528402-48528245 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 19, 145

Conread position: 3-154
Cow position: chr3:71245963-71245811 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 19, 72

Conread position: 3-167
Cow position: chr3:54877027-54876867 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 3-230
Cow position: chr3:25753620-25753395 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 73

Conread position: 3-233
Cow position: chr3:29391754-29391984 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 19, 66

Conread position: 3-250
Cow position: chr3:15988307-15988060 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 73

Conread position: 3-254
Cow position: chr3:83289580-83289836 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 73

Conread position: 3-259
Cow position: chr3:55454695-55454950 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 168
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 78

Conread position: 3-289
Cow position: chr3:15655948-15656228 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 20, 66

Conread position: 3-289
Cow position: chr3:35854202-35854500 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 114, 71

Conread position: 3-290
Cow position: chr3:42977225-42977509 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 19, 47

Conread position: 3-291
Cow position: chr3:57742880-57742593 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 72

Conread position: 3-292
Cow position: chr3:49732429-49732716 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 73

Conread position: 3-293
Cow position: chr3:49564384-49564094 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 85

Conread position: 3-296
Cow position: chr3:14438620-14438909 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 19, 78

Conread position: 3-296
Cow position: chr3:24352054-24351770 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 14, 28

Conread position: 3-296
Cow position: chr3:79668478-79668185 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 78

Conread position: 3-302
Cow position: chr3:18353001-18353303 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 145

Conread position: 4-151
Cow position: chr3:26974273-26974419 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 72

Conread position: 4-250
Cow position: chr3:23169859-23170088 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 188
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 50

Conread position: 4-292
Cow position: chr3:31396735-31396452 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 18, 26

Conread position: 4-296
Cow position: chr3:5951256-5951541 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 9, 85

Conread position: 4-296
Cow position: chr3:25690012-25689731 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 18, 42

Conread position: 4-296
Cow position: chr3:49388015-49387727 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 71

Conread position: 4-296
Cow position: chr3:49463183-49463480 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 250

Conread position: 4-296
Cow position: chr3:68509972-68510261 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 84

Conread position: 5-243
Cow position: chr3:22235135-22235371 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 18, 72

Conread position: 10-140
Cow position: chr3:54766328-54766202 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 20

Conread position: 11-149
Cow position: chr3:1299437-1299304 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 58

Conread position: 11-267
Cow position: chr3:66736213-66736468 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 12, 51

Conread position: 13-296
Cow position: chr3:14466503-14466786 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 9, 62

Conread position: 20-293
Cow position: chr3:19942240-19941969 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 96, 60

Conread position: 20-296
Cow position: chr3:2432305-2432578 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 54, 64

Conread position: 20-296
Cow position: chr3:24572817-24573092 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 60

Conread position: 29-289
Cow position: chr3:19126618-19126357 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 158, 46

Conread position: 30-291
Cow position: chr3:63736729-63736468 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 10, 46

Conread position: 30-296
Cow position: chr3:31810640-31810377 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 32, 48

Conread position: 30-296
Cow position: chr3:52725936-52726193 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 140, 44

Conread position: 31-152
Cow position: chr3:61200011-61199891 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 31-291
Cow position: chr3:27782984-27783226 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 31-296
Cow position: chr3:49134198-49134462 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 32-224
Cow position: chr3:82891364-82891178 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 32-304
Cow position: chr3:77726788-77726526 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 42

Conread position: 34-289
Cow position: chr3:21005152-21004894 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 45, 174

Conread position: 34-296
Cow position: chr3:16869070-16869321 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 87, 33

Conread position: 35-259
Cow position: chr3:26660631-26660848 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 156, 40

Conread position: 36-291
Cow position: chr3:77226065-77225813 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 42-296
Cow position: chr3:31120809-31121062 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 45, 0

Conread position: 42-296
Cow position: chr3:63238708-63238955 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 42-296
Cow position: chr3:69962518-69962772 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 33

Conread position: 42-296
Cow position: chr3:74849819-74850072 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 129, 33

Conread position: 46-296
Cow position: chr3:1034186-1033937 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 61-267
Cow position: chr3:64318059-64317854 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 13, 56

Conread position: 62-296
Cow position: chr3:39856771-39856538 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 64-289
Cow position: chr3:70890510-70890269 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 129, 10

Conread position: 67-290
Cow position: chr3:39555283-39555506 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 55, 68

Conread position: 68-267
Cow position: chr3:44101355-44101156 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 68-290
Cow position: chr3:6854324-6854546 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 75-290
Cow position: chr3:52690046-52689837 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 132, 0

Conread position: 77-296
Cow position: chr3:40285025-40285241 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 86-296
Cow position: chr3:34027590-34027800 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 87-232
Cow position: chr3:7772734-7772878 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 93-291
Cow position: chr3:36571415-36571221 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 0

Show alignments to all cow chromosomes.