Cow genome map

Conread name: rfhi4033b_e23.y1

Conread position: 1-138
Cow position: chrX:19657748-19657611 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 80

Conread position: 1-140
Cow position: chrX:35388668-35388807 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 85

Conread position: 1-140
Cow position: chrX:35847476-35847338 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 21, 75

Conread position: 1-143
Cow position: chrX:26974161-26974019 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 87

Conread position: 1-150
Cow position: chrX:45903428-45903280 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 98

Conread position: 1-153
Cow position: chrX:38935673-38935521 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 75

Conread position: 1-157
Cow position: chrX:40580912-40581069 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 21, 87

Conread position: 1-161
Cow position: chrX:13414555-13414713 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 68

Conread position: 1-165
Cow position: chrX:25204587-25204423 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 90

Conread position: 1-167
Cow position: chrX:2160016-2159850 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 87

Conread position: 1-167
Cow position: chrX:11950235-11950401 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 96

Conread position: 1-167
Cow position: chrX:18898398-18898564 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 80

Conread position: 1-167
Cow position: chrX:24441988-24442154 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 87

Conread position: 1-167
Cow position: chrX:45236717-45236551 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 87

Conread position: 1-168
Cow position: chrX:27704850-27704683 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 75

Conread position: 1-172
Cow position: chrX:40268736-40268561 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 47

Conread position: 1-180
Cow position: chrX:865647-865467 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 87

Conread position: 1-190
Cow position: chrX:23969602-23969415 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 21, 29

Conread position: 1-190
Cow position: chrX:31372714-31372524 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 86

Conread position: 1-204
Cow position: chrX:5124108-5124311 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 87

Conread position: 1-206
Cow position: chrX:16021125-16021329 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 22, 74

Conread position: 1-211
Cow position: chrX:15113923-15113713 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 21, 87

Conread position: 1-211
Cow position: chrX:23317161-23317368 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 75

Conread position: 1-211
Cow position: chrX:40365494-40365705 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 75

Conread position: 1-213
Cow position: chrX:41527263-41527470 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 21, 75

Conread position: 1-227
Cow position: chrX:4751118-4751337 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-230
Cow position: chrX:37134382-37134611 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 87

Conread position: 1-231
Cow position: chrX:19929686-19929457 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 75

Conread position: 1-237
Cow position: chrX:5392324-5392560 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 21, 87

Conread position: 1-237
Cow position: chrX:10301379-10301146 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 108, 21

Conread position: 1-240
Cow position: chrX:38330633-38330396 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 75

Conread position: 1-243
Cow position: chrX:3211285-3211527 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 95

Conread position: 1-243
Cow position: chrX:39939502-39939744 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-251
Cow position: chrX:4995861-4995617 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-253
Cow position: chrX:17158560-17158808 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 15

Conread position: 1-254
Cow position: chrX:37832216-37832451 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 73, 0

Conread position: 1-257
Cow position: chrX:22125604-22125860 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 21, 76

Conread position: 1-264
Cow position: chrX:37118161-37117896 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-265
Cow position: chrX:12465283-12465025 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 95

Conread position: 1-267
Cow position: chrX:2486381-2486647 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 16, 87

Conread position: 1-267
Cow position: chrX:12178930-12178659 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 21, 87

Conread position: 1-267
Cow position: chrX:12651570-12651832 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 21, 7

Conread position: 1-267
Cow position: chrX:28866761-28867030 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 85

Conread position: 1-267
Cow position: chrX:44054056-44053801 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 22, 72

Conread position: 1-274
Cow position: chrX:42954691-42954421 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 62

Conread position: 1-277
Cow position: chrX:22811141-22810864 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 75

Conread position: 1-279
Cow position: chrX:18455519-18455796 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 22, 75

Conread position: 1-284
Cow position: chrX:29083318-29083035 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-285
Cow position: chrX:41733939-41734216 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 76

Conread position: 1-287
Cow position: chrX:39559112-39559383 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 56

Conread position: 1-288
Cow position: chrX:30681253-30681535 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 75

Conread position: 1-289
Cow position: chrX:17663667-17663951 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 1-289
Cow position: chrX:24317073-24316779 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 60

Conread position: 1-289
Cow position: chrX:28133347-28133063 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 73, 0

Conread position: 1-290
Cow position: chrX:2500380-2500668 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 48

Conread position: 1-290
Cow position: chrX:2649099-2649388 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 26, 43

Conread position: 1-290
Cow position: chrX:16526041-16525752 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 87

Conread position: 1-290
Cow position: chrX:34222016-34221721 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 21, 75

Conread position: 1-291
Cow position: chrX:20792387-20792100 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 62

Conread position: 1-291
Cow position: chrX:20999026-20999307 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 211
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 80

Conread position: 1-291
Cow position: chrX:27095380-27095098 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 80

Conread position: 1-291
Cow position: chrX:35287676-35287386 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 57

Conread position: 1-292
Cow position: chrX:3361072-3360781 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-292
Cow position: chrX:9899093-9899376 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 10

Conread position: 1-292
Cow position: chrX:14458916-14459220 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 21, 87

Conread position: 1-292
Cow position: chrX:22579136-22579427 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 21, 87

Conread position: 1-292
Cow position: chrX:22819329-22819038 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-292
Cow position: chrX:30180676-30180964 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 39

Conread position: 1-293
Cow position: chrX:6235605-6235888 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 62

Conread position: 1-293
Cow position: chrX:10412724-10413016 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-293
Cow position: chrX:14462565-14462279 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 49

Conread position: 1-293
Cow position: chrX:18193941-18193649 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-293
Cow position: chrX:23221792-23222072 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 21, 80

Conread position: 1-293
Cow position: chrX:28518469-28518761 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 87

Conread position: 1-293
Cow position: chrX:29907951-29908243 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 87

Conread position: 1-293
Cow position: chrX:41847279-41847569 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-296
Cow position: chrX:671742-672037 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:2008452-2008741 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-296
Cow position: chrX:2048363-2048068 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 97

Conread position: 1-296
Cow position: chrX:2559709-2560002 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:2579670-2579375 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:4622702-4622997 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:4767941-4767655 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 21, 74

Conread position: 1-296
Cow position: chrX:5248636-5248347 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 21, 31

Conread position: 1-296
Cow position: chrX:5866397-5866102 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:6372431-6372136 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:7096709-7096415 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:7551550-7551845 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position: chrX:8482698-8482404 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 87

Conread position: 1-296
Cow position: chrX:8641039-8640744 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:9011578-9011287 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-296
Cow position: chrX:9642181-9642476 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:10445164-10445459 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 85

Conread position: 1-296
Cow position: chrX:10866618-10866900 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 21, 74

Conread position: 1-296
Cow position: chrX:11146082-11146378 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 87

Conread position: 1-296
Cow position: chrX:11461745-11462037 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 85

Conread position: 1-296
Cow position: chrX:11499525-11499818 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:11744518-11744226 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 74

Conread position: 1-296
Cow position: chrX:11976195-11976489 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:12310138-12310429 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 74

Conread position: 1-296
Cow position: chrX:12360139-12359843 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:13406039-13406330 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 29

Conread position: 1-296
Cow position: chrX:14782094-14782389 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:15121910-15122204 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 87

Conread position: 1-296
Cow position: chrX:15151424-15151708 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position: chrX:15175301-15175593 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:15260368-15260659 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:15621281-15621575 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 60

Conread position: 1-296
Cow position: chrX:16086872-16087167 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:16278903-16278612 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:16359756-16360051 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:16702922-16702627 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:16782531-16782238 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position: chrX:16808563-16808857 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:17782751-17782456 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:17889609-17889895 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position: chrX:17994710-17994418 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 97

Conread position: 1-296
Cow position: chrX:18244236-18243949 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position: chrX:18488463-18488758 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:18656554-18656849 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:18950485-18950780 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 95

Conread position: 1-296
Cow position: chrX:19399029-19398734 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:19473908-19474192 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 60

Conread position: 1-296
Cow position: chrX:20020830-20020537 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:20675119-20674824 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-296
Cow position: chrX:20953784-20953490 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position: chrX:21226728-21226435 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:21343646-21343351 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 87

Conread position: 1-296
Cow position: chrX:21582694-21582399 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:21592542-21592249 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position: chrX:21685870-21685575 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 95

Conread position: 1-296
Cow position: chrX:21768055-21767756 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 1-296
Cow position: chrX:21793842-21793546 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 98

Conread position: 1-296
Cow position: chrX:22077091-22077384 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:23022564-23022274 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position: chrX:23280275-23279983 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:23341740-23342035 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position: chrX:23387287-23387577 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:23395858-23395563 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:23452194-23452491 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:23572565-23572862 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 1-296
Cow position: chrX:23986501-23986206 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:24280171-24279873 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position: chrX:24483116-24483406 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position: chrX:24588485-24588778 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position: chrX:25282242-25282536 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 76

Conread position: 1-296
Cow position: chrX:26275389-26275095 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 85

Conread position: 1-296
Cow position: chrX:27305180-27304885 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:27318482-27318187 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:27423032-27423315 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 21, 97

Conread position: 1-296
Cow position: chrX:27616059-27615770 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 1-296
Cow position: chrX:27983103-27983395 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 44

Conread position: 1-296
Cow position: chrX:28753089-28753380 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-296
Cow position: chrX:28879343-28879625 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 76

Conread position: 1-296
Cow position: chrX:29099668-29099375 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:29880029-29880322 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position: chrX:30089795-30090086 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 75

Conread position: 1-296
Cow position: chrX:30159740-30160033 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 28

Conread position: 1-296
Cow position: chrX:30163987-30164280 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 21, 80

Conread position: 1-296
Cow position: chrX:30172456-30172750 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 7

Conread position: 1-296
Cow position: chrX:30228862-30229156 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 20, 80

Conread position: 1-296
Cow position: chrX:30455370-30455660 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:31202092-31201797 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 21, 60

Conread position: 1-296
Cow position: chrX:31495987-31495693 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:31978590-31978884 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:32063920-32064211 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 14

Conread position: 1-296
Cow position: chrX:32145013-32145299 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 10

Conread position: 1-296
Cow position: chrX:32584680-32584974 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:33583945-33583649 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 200
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 67

Conread position: 1-296
Cow position: chrX:34442191-34442472 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 22, 74

Conread position: 1-296
Cow position: chrX:36535484-36535773 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-296
Cow position: chrX:36839957-36839669 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 75

Conread position: 1-296
Cow position: chrX:37080268-37080558 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 1-296
Cow position: chrX:37852387-37852094 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:38150939-38150645 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:38231016-38231311 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 60

Conread position: 1-296
Cow position: chrX:38852412-38852119 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-296
Cow position: chrX:39713802-39713507 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:40224993-40225278 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 173, 14

Conread position: 1-296
Cow position: chrX:41156562-41156268 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-296
Cow position: chrX:42733123-42732828 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 95

Conread position: 1-296
Cow position: chrX:44193189-44193480 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 26, 75

Conread position: 1-296
Cow position: chrX:45373857-45374151 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 74

Conread position: 1-296
Cow position: chrX:46296911-46296618 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 7

Conread position: 1-296
Cow position: chrX:47000402-47000697 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-297
Cow position: chrX:3417886-3418181 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 7

Conread position: 1-300
Cow position: chrX:30060140-30059840 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 82

Conread position: 1-301
Cow position: chrX:22538782-22539082 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 95

Conread position: 1-301
Cow position: chrX:22870073-22869771 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 83

Conread position: 1-301
Cow position: chrX:44901388-44901094 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 1-302
Cow position: chrX:13178356-13178655 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 76

Conread position: 1-302
Cow position: chrX:13430538-13430837 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 74

Conread position: 1-302
Cow position: chrX:24174702-24175001 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 68

Conread position: 1-302
Cow position: chrX:26508478-26508182 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-302
Cow position: chrX:27450798-27451093 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 75

Conread position: 1-302
Cow position: chrX:31261382-31261682 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 28

Conread position: 1-302
Cow position: chrX:41884928-41885226 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 42

Conread position: 1-303
Cow position: chrX:1550216-1549913 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 87

Conread position: 1-303
Cow position: chrX:2382719-2382414 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 68

Conread position: 1-303
Cow position: chrX:3406091-3406380 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 80

Conread position: 1-303
Cow position: chrX:29916095-29916398 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 10

Conread position: 1-304
Cow position: chrX:1616983-1617286 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-304
Cow position: chrX:4407134-4406831 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-304
Cow position: chrX:7277195-7276909 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 75

Conread position: 1-304
Cow position: chrX:15140285-15140583 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 80

Conread position: 1-304
Cow position: chrX:24109353-24109655 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-304
Cow position: chrX:29288244-29287945 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 20, 74

Conread position: 1-305
Cow position: chrX:620013-620315 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 1-305
Cow position: chrX:33537826-33537530 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 59

Conread position: 1-305
Cow position: chrX:40560290-40560592 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 2-152
Cow position: chrX:25459388-25459539 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 80

Conread position: 2-185
Cow position: chrX:8144631-8144810 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 17, 74

Conread position: 2-234
Cow position: chrX:21662286-21662060 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 72

Conread position: 2-237
Cow position: chrX:21063722-21063490 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 56

Conread position: 2-237
Cow position: chrX:30196548-30196313 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 86

Conread position: 2-254
Cow position: chrX:6766485-6766734 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 20, 73

Conread position: 2-291
Cow position: chrX:25573599-25573314 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 20, 28

Conread position: 2-296
Cow position: chrX:27977584-27977876 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 79

Conread position: 2-296
Cow position: chrX:29759938-29759646 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 20, 86

Conread position: 2-296
Cow position: chrX:31728713-31728423 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 72

Conread position: 2-296
Cow position: chrX:39548649-39548355 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 86

Conread position: 2-296
Cow position: chrX:39556545-39556831 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 28, 130

Conread position: 2-296
Cow position: chrX:39698011-39697724 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 114, 18

Conread position: 2-296
Cow position: chrX:40184323-40184029 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 2-296
Cow position: chrX:42222523-42222813 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 79

Conread position: 2-304
Cow position: chrX:1056136-1056442 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 2-304
Cow position: chrX:29790569-29790869 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 28

Conread position: 3-167
Cow position: chrX:45042679-45042513 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 3-259
Cow position: chrX:30135098-30135349 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 37

Conread position: 3-283
Cow position: chrX:8400312-8400580 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 46

Conread position: 3-292
Cow position: chrX:28647021-28647310 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 72

Conread position: 3-293
Cow position: chrX:14124997-14125285 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 3-296
Cow position: chrX:3464828-3465118 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 84

Conread position: 3-296
Cow position: chrX:17891795-17891502 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 73

Conread position: 3-296
Cow position: chrX:29892336-29892040 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 21, 78

Conread position: 3-296
Cow position: chrX:34761315-34761022 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 85

Conread position: 4-264
Cow position: chrX:21626453-21626709 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 189, 70

Conread position: 4-280
Cow position: chrX:12289969-12289702 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 71

Conread position: 4-291
Cow position: chrX:2300129-2299856 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 71, 0

Conread position: 4-293
Cow position: chrX:22809501-22809224 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 18, 97

Conread position: 4-296
Cow position: chrX:14801571-14801862 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 84

Conread position: 9-291
Cow position: chrX:30165419-30165701 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 13, 87

Conread position: 11-291
Cow position: chrX:38218218-38217941 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 65

Conread position: 11-296
Cow position: chrX:22493272-22492990 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 77

Conread position: 13-212
Cow position: chrX:17794090-17793895 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 9, 54

Conread position: 19-295
Cow position: chrX:27498061-27497788 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 20-211
Cow position: chrX:35240103-35239913 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 20-296
Cow position: chrX:25451567-25451291 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 229, 55

Conread position: 22-296
Cow position: chrX:3582168-3581893 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 52, 26

Conread position: 22-296
Cow position: chrX:39560430-39560703 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 65

Conread position: 26-296
Cow position: chrX:39352396-39352654 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 37

Conread position: 27-296
Cow position: chrX:16803643-16803910 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 30-212
Cow position: chrX:42466773-42466951 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 30-262
Cow position: chrX:23415474-23415704 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 44, 0

Conread position: 30-296
Cow position: chrX:26755421-26755683 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 55, 0

Conread position: 30-296
Cow position: chrX:29700722-29700985 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 30-296
Cow position: chrX:34993397-34993143 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 144, 32

Conread position: 31-210
Cow position: chrX:3827887-3827709 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 31-262
Cow position: chrX:44874283-44874508 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 26

Conread position: 34-167
Cow position: chrX:20580509-20580378 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 36-296
Cow position: chrX:24447170-24446910 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 156
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 42-243
Cow position: chrX:158819-158619 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 33

Conread position: 42-296
Cow position: chrX:5375068-5375321 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 43-290
Cow position: chrX:23134797-23134553 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 17

Conread position: 43-296
Cow position: chrX:21833092-21832842 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 44, 0

Conread position: 43-297
Cow position: chrX:26442040-26442295 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 163

Conread position: 62-293
Cow position: chrX:40827922-40828147 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 122, 12

Conread position: 64-302
Cow position: chrX:24321440-24321679 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 74, 23

Conread position: 69-302
Cow position: chrX:2185406-2185175 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 102, 17

Conread position: 75-265
Cow position: chrX:11074008-11074193 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 77-296
Cow position: chrX:12996735-12996954 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 84-292
Cow position: chrX:29047283-29047075 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 86-290
Cow position: chrX:20742019-20741815 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 88-296
Cow position: chrX:21750081-21750286 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 23

Conread position: 91-296
Cow position: chrX:16854204-16854409 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 86, 78

Conread position: 92-291
Cow position: chrX:6655860-6656057 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 79, 0

Conread position: 120-302
Cow position: chrX:8104375-8104557 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 37

Show alignments to all cow chromosomes.