Cow genome map

Conread name: rfty509b_i5.y2

Conread position: 1-195
Cow position: chr11:37068535-37068335 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 71, 36

Conread position: 1-195
Cow position: chr11:62808880-62808670 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 71, 36

Conread position: 1-196
Cow position: chr11:75748203-75748417 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 36

Conread position: 1-212
Cow position: chr11:41577240-41577020 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 36

Conread position: 1-212
Cow position: chr11:77241142-77241370 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 56, 36

Conread position: 1-226
Cow position: chr11:83196267-83196512 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 36

Conread position: 1-227
Cow position: chr11:10076544-10076784 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 66

Conread position: 1-237
Cow position: chr11:43913990-43914238 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 36

Conread position: 1-253
Cow position: chr11:30120893-30120616 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 36

Conread position: 1-256
Cow position: chr11:4323135-4323407 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 87, 36

Conread position: 1-280
Cow position: chr11:70273069-70273383 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 37

Conread position: 1-295
Cow position: chr11:44642517-44642208 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 72, 36

Conread position: 1-299
Cow position: chr11:33526844-33527140 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 66, 36

Conread position: 1-299
Cow position: chr11:36986730-36987037 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 36

Conread position: 1-299
Cow position: chr11:64638755-64638438 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 66, 37

Conread position: 1-300
Cow position: chr11:34830011-34829697 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 21, 38

Conread position: 1-302
Cow position: chr11:53553020-53553306 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 179, 36

Conread position: 1-306
Cow position: chr11:76606454-76606767 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 59, 37

Conread position: 1-309
Cow position: chr11:22499583-22499269 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 56, 37

Conread position: 1-309
Cow position: chr11:30354835-30355156 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 58, 34

Conread position: 1-309
Cow position: chr11:58588113-58588442 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 58, 36

Conread position: 1-310
Cow position: chr11:30934194-30934516 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 64, 7

Conread position: 1-310
Cow position: chr11:36799530-36799208 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 60, 36

Conread position: 1-312
Cow position: chr11:76114423-76114744 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 37

Conread position: 1-313
Cow position: chr11:1362712-1362367 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 37

Conread position: 1-314
Cow position: chr11:44636992-44636651 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 37

Conread position: 1-314
Cow position: chr11:53147772-53147428 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 241
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 36

Conread position: 1-315
Cow position: chr11:8148118-8147795 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 67, 6

Conread position: 1-318
Cow position: chr11:377880-377535 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 254
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 56, 36

Conread position: 1-318
Cow position: chr11:35684729-35684394 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 36

Conread position: 1-320
Cow position: chr11:43897906-43898244 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 237
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 36

Conread position: 1-320
Cow position: chr11:63482657-63482321 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 71, 36

Conread position: 1-321
Cow position: chr11:30924921-30925267 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 252
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 37

Conread position: 1-322
Cow position: chr11:59702252-59702601 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 38

Conread position: 1-323
Cow position: chr11:83230619-83230288 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 35, 182

Conread position: 1-325
Cow position: chr11:1071323-1070976 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 36

Conread position: 1-325
Cow position: chr11:7589959-7590303 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 56, 36

Conread position: 1-325
Cow position: chr11:34962830-34963184 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 68, 45

Conread position: 1-325
Cow position: chr11:48271963-48272315 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 56, 36

Conread position: 1-325
Cow position: chr11:54334103-54334443 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 72, 210

Conread position: 1-325
Cow position: chr11:58990279-58990606 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 64, 34

Conread position: 1-325
Cow position: chr11:70609556-70609911 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 244
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 59, 36

Conread position: 1-325
Cow position: chr11:73924790-73924448 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 230
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 65, 37

Conread position: 1-325
Cow position: chr11:77128437-77128775 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 64, 36

Conread position: 1-325
Cow position: chr11:80530139-80530473 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 174

Conread position: 1-326
Cow position: chr11:17321426-17321766 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 55, 36

Conread position: 1-329
Cow position: chr11:8339636-8339301 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 239
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 56, 36

Conread position: 1-332
Cow position: chr11:30879448-30879785 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 53, 37

Conread position: 1-332
Cow position: chr11:33310740-33311095 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 36

Conread position: 1-334
Cow position: chr11:18086569-18086224 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 36

Conread position: 1-339
Cow position: chr11:11232684-11232332 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 36, 57

Conread position: 1-341
Cow position: chr11:7924821-7924459 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 36

Conread position: 1-341
Cow position: chr11:38236012-38236386 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 260
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 50, 36

Conread position: 1-344
Cow position: chr11:46580135-46580493 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 247
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 65

Conread position: 1-345
Cow position: chr11:43430678-43430320 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 57, 99

Conread position: 1-346
Cow position: chr11:59872694-59873061 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 36

Conread position: 1-348
Cow position: chr11:32436097-32436478 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 280
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 56, 36

Conread position: 1-350
Cow position: chr11:18707045-18706687 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 251
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 36

Conread position: 1-353
Cow position: chr11:20602008-20602363 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 60, 36

Conread position: 1-354
Cow position: chr11:36112186-36112564 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 36

Conread position: 1-354
Cow position: chr11:67804517-67804891 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 267
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 56, 36

Conread position: 1-355
Cow position: chr11:69119068-69119440 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 56, 36

Conread position: 1-356
Cow position: chr11:71868835-71868455 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 269
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 37

Conread position: 1-358
Cow position: chr11:50072730-50073082 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 266
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 106, 36

Conread position: 1-359
Cow position: chr11:8988461-8988085 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 278
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 105

Conread position: 1-359
Cow position: chr11:68207069-68206695 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 266
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 71, 38

Conread position: 1-361
Cow position: chr11:17083529-17083161 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 257
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 71, 117

Conread position: 1-361
Cow position: chr11:34467371-34467715 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 62, 36

Conread position: 1-361
Cow position: chr11:52464210-52464558 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 69

Conread position: 1-366
Cow position: chr11:9221957-9221564 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 277
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 36

Conread position: 1-366
Cow position: chr11:25791924-25791535 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 272
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 12, 38

Conread position: 1-366
Cow position: chr11:48544211-48544594 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 276
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 64, 36

Conread position: 1-366
Cow position: chr11:62225768-62226142 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 245
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 107, 36

Conread position: 1-366
Cow position: chr11:67345875-67345501 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 256
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 25, 37

Conread position: 1-366
Cow position: chr11:83066264-83066650 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 279
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 46, 37

Conread position: 1-368
Cow position: chr11:3393442-3393054 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 19

Conread position: 1-371
Cow position: chr11:24601739-24602123 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 271
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 56, 36

Conread position: 1-372
Cow position: chr11:11469865-11469489 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 266
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 71, 36

Conread position: 1-372
Cow position: chr11:34120966-34121362 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 268
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 56, 36

Conread position: 1-373
Cow position: chr11:22978091-22977714 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 273
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 57, 36

Conread position: 1-374
Cow position: chr11:13043373-13042979 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 36

Conread position: 1-374
Cow position: chr11:22932201-22931828 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 271
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 67, 25

Conread position: 1-374
Cow position: chr11:26117948-26117570 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 254
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 73, 36

Conread position: 1-374
Cow position: chr11:55744242-55744638 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 283
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 55, 36

Conread position: 1-375
Cow position: chr11:82940849-82940460 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 281
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 210

Conread position: 1-377
Cow position: chr11:34113043-34113433 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 273
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 41

Conread position: 1-379
Cow position: chr11:19487707-19487306 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 256
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 40

Conread position: 1-379
Cow position: chr11:77758992-77758588 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 291
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 52, 36

Conread position: 1-380
Cow position: chr11:36659044-36658655 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 53, 36

Conread position: 1-384
Cow position: chr11:38638889-38639279 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 295
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 36

Conread position: 1-387
Cow position: chr11:77319192-77319594 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 269
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 113, 36

Conread position: 1-392
Cow position: chr11:78381278-78380886 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 36

Conread position: 1-393
Cow position: chr11:6234110-6233694 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 302
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 53, 36

Conread position: 1-393
Cow position: chr11:35580022-35580445 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 286
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 54, 37

Conread position: 1-393
Cow position: chr11:41549566-41549150 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 294
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 65, 36

Conread position: 1-393
Cow position: chr11:41986275-41985864 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 294
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 70, 37

Conread position: 1-393
Cow position: chr11:48932815-48932405 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 293
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 59, 34

Conread position: 1-393
Cow position: chr11:65495559-65495155 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 282
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 47, 36

Conread position: 1-394
Cow position: chr11:61454766-61454317 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 316
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 53, 36

Conread position: 1-395
Cow position: chr11:1625446-1625036 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 280
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 56, 41

Conread position: 1-395
Cow position: chr11:17860385-17859967 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 285
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 36

Conread position: 1-395
Cow position: chr11:39499145-39499542 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 281
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 111, 36

Conread position: 1-395
Cow position: chr11:49148817-49149233 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 33

Conread position: 1-396
Cow position: chr11:17278894-17278496 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 291
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 9

Conread position: 1-396
Cow position: chr11:20761613-20762039 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 296
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 54, 36

Conread position: 1-396
Cow position: chr11:21728499-21728102 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 276
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 38

Conread position: 1-396
Cow position: chr11:30191938-30192365 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 306
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 56, 36

Conread position: 1-396
Cow position: chr11:55333677-55334106 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 296
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 36

Conread position: 1-396
Cow position: chr11:80564073-80564490 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 275
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 36

Conread position: 1-397
Cow position: chr11:36647129-36647515 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 291
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 36

Conread position: 1-397
Cow position: chr11:44222669-44223069 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 38

Conread position: 1-397
Cow position: chr11:55761647-55762044 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 288
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 31, 173

Conread position: 1-397
Cow position: chr11:62620153-62620569 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 299
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 69, 36

Conread position: 1-398
Cow position: chr11:2083916-2084336 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 292
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 93, 36

Conread position: 1-398
Cow position: chr11:11125432-11125854 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 37

Conread position: 1-398
Cow position: chr11:17227871-17227459 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 70

Conread position: 1-398
Cow position: chr11:18484391-18484007 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 296
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 64, 36

Conread position: 1-398
Cow position: chr11:27405300-27404881 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 301
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 56, 36

Conread position: 1-398
Cow position: chr11:31227763-31228142 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 287
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 95, 36

Conread position: 1-398
Cow position: chr11:33348416-33348004 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 36

Conread position: 1-398
Cow position: chr11:36182457-36182885 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 297
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 68, 36

Conread position: 1-398
Cow position: chr11:40818870-40818444 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 288
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 71, 36

Conread position: 1-398
Cow position: chr11:42083248-42083642 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 36

Conread position: 1-398
Cow position: chr11:45631996-45631588 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 295
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 36

Conread position: 1-398
Cow position: chr11:49152722-49153130 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 301
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 69, 32

Conread position: 1-398
Cow position: chr11:64334626-64335019 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 49, 36

Conread position: 1-398
Cow position: chr11:70484093-70483659 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 300
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 56, 36

Conread position: 1-398
Cow position: chr11:85723470-85723884 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 279
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 36

Conread position: 1-399
Cow position: chr11:10992050-10992454 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 278
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 36

Conread position: 1-399
Cow position: chr11:30708271-30708695 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 297
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 38

Conread position: 1-399
Cow position: chr11:40792925-40792503 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 295
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 89, 40

Conread position: 1-399
Cow position: chr11:46746403-46746828 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 311
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 68, 36

Conread position: 1-399
Cow position: chr11:52297455-52297027 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 300
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 36

Conread position: 1-400
Cow position: chr11:13499783-13500203 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 298
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 45, 36

Conread position: 1-400
Cow position: chr11:75480258-75479826 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 304
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 51, 36

Conread position: 1-401
Cow position: chr11:21894385-21893954 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 287
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 56, 36

Conread position: 1-401
Cow position: chr11:26144316-26143901 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 303
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 56, 36

Conread position: 1-401
Cow position: chr11:52381102-52380674 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 287
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 72, 37

Conread position: 1-401
Cow position: chr11:53778381-53778812 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 36

Conread position: 1-401
Cow position: chr11:66041042-66041466 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 295
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 51, 36

Conread position: 1-402
Cow position: chr11:44031768-44032199 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 299
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 36

Conread position: 1-402
Cow position: chr11:47899045-47899443 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 292
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 56, 36

Conread position: 1-402
Cow position: chr11:68910079-68909659 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 309
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 68, 36

Conread position: 1-403
Cow position: chr11:18698643-18699063 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 1-403
Cow position: chr11:50153050-50152619 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 299
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 20, 24

Conread position: 1-410
Cow position: chr11:77705534-77705955 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 36

Conread position: 1-412
Cow position: chr11:46748098-46747650 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 310
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 36

Conread position: 2-226
Cow position: chr11:9837327-9837086 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 35

Conread position: 2-301
Cow position: chr11:63469652-63469965 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 215
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 35

Conread position: 2-315
Cow position: chr11:23128770-23128435 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 233
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 55, 35

Conread position: 2-318
Cow position: chr11:29947157-29946805 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 36

Conread position: 2-325
Cow position: chr11:3282821-3283138 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 60, 36

Conread position: 2-325
Cow position: chr11:56518543-56518196 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 37

Conread position: 2-361
Cow position: chr11:21844366-21843986 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 278
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 55, 35

Conread position: 2-377
Cow position: chr11:45646824-45646424 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 284
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 69, 32

Conread position: 2-378
Cow position: chr11:48474478-48474883 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 297
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 63, 21

Conread position: 2-397
Cow position: chr11:25620626-25620199 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 302
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 59, 36

Conread position: 2-398
Cow position: chr11:83043591-83043178 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 280
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 65, 35

Conread position: 2-400
Cow position: chr11:35347978-35347560 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 280
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 189

Conread position: 3-331
Cow position: chr11:42358895-42359239 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 247
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 58, 38

Conread position: 3-359
Cow position: chr11:2917809-2917442 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 255
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 60, 34

Conread position: 3-373
Cow position: chr11:73354283-73353899 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 280
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 62, 36

Conread position: 3-393
Cow position: chr11:64029486-64029083 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 287
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 58, 34

Conread position: 4-361
Cow position: chr11:27248263-27248641 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 257
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 34

Conread position: 4-374
Cow position: chr11:38874630-38874250 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 53, 19

Conread position: 4-398
Cow position: chr11:27746692-27747107 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 288
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 53, 33

Conread position: 5-357
Cow position: chr11:23586408-23586789 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 279
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 18

Conread position: 7-227
Cow position: chr11:17112852-17112617 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 30

Conread position: 7-302
Cow position: chr11:35874211-35873912 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 36, 30

Conread position: 7-325
Cow position: chr11:23232739-23232405 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 32

Conread position: 7-374
Cow position: chr11:29960079-29960461 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 28

Conread position: 7-396
Cow position: chr11:20238447-20238863 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 293
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 31

Conread position: 7-401
Cow position: chr11:40458895-40459301 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 30

Conread position: 7-402
Cow position: chr11:77745476-77745054 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 292
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 30

Conread position: 8-302
Cow position: chr11:69810679-69810994 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 29

Conread position: 8-313
Cow position: chr11:36238557-36238880 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 238
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 49, 29

Conread position: 8-325
Cow position: chr11:17574546-17574235 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 8, 30

Conread position: 8-366
Cow position: chr11:71008926-71009265 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 80, 29

Conread position: 9-318
Cow position: chr11:44234131-44234463 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 63, 28

Conread position: 9-366
Cow position: chr11:81406381-81406009 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 265
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 57, 32

Conread position: 9-379
Cow position: chr11:4436109-4436505 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 275
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 61, 29

Conread position: 9-398
Cow position: chr11:66188544-66188132 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 28

Conread position: 10-332
Cow position: chr11:2092118-2092457 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 236
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 27

Conread position: 10-367
Cow position: chr11:21852512-21852157 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 253
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 27

Conread position: 11-400
Cow position: chr11:2925512-2925117 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 282
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 26

Conread position: 11-402
Cow position: chr11:65762818-65762392 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 293
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 46, 26

Conread position: 12-399
Cow position: chr11:15382689-15382305 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 263
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 83, 45

Conread position: 13-273
Cow position: chr11:61859119-61858841 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 24

Conread position: 14-314
Cow position: chr11:81931300-81931013 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 61, 21

Conread position: 14-335
Cow position: chr11:82108106-82107783 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 229
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 31, 23

Conread position: 14-400
Cow position: chr11:42884989-42884594 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 265
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 21

Conread position: 14-402
Cow position: chr11:39462399-39462812 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 296
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 40, 23

Conread position: 23-271
Cow position: chr11:2811933-2811666 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 14

Conread position: 23-304
Cow position: chr11:52983481-52983767 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 225
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 71, 14

Conread position: 23-395
Cow position: chr11:36286489-36286890 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 287
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 15, 151

Conread position: 23-396
Cow position: chr11:4207103-4207498 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 283
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 44, 153

Conread position: 29-352
Cow position: chr11:76369722-76369376 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 8

Conread position: 30-324
Cow position: chr11:73512626-73512331 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 9

Conread position: 30-354
Cow position: chr11:13040355-13040036 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 235
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 7

Conread position: 31-304
Cow position: chr11:67246603-67246878 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 209
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 6

Conread position: 31-379
Cow position: chr11:68912941-68913316 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 262
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 6

Conread position: 34-373
Cow position: chr11:13592547-13592907 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 130

Conread position: 34-394
Cow position: chr11:74316524-74316891 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 255
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 10

Conread position: 35-328
Cow position: chr11:68905268-68904960 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 138

Conread position: 35-394
Cow position: chr11:49211005-49210632 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 253
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 32, 149

Conread position: 44-326
Cow position: chr11:48496770-48496473 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 205
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 176

Conread position: 53-337
Cow position: chr11:83687601-83687304 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 109

Conread position: 53-395
Cow position: chr11:18572633-18572969 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 13

Conread position: 53-397
Cow position: chr11:48383356-48383724 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 253
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 114

Conread position: 55-371
Cow position: chr11:69977817-69978131 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 35, 57

Conread position: 55-392
Cow position: chr11:41215573-41215916 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 12, 110

Conread position: 55-402
Cow position: chr11:64077673-64077309 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 246
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 114

Conread position: 56-398
Cow position: chr11:45742216-45742564 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 18

Conread position: 56-400
Cow position: chr11:17493313-17493673 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 55, 10

Conread position: 57-392
Cow position: chr11:55494514-55494847 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 240
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 104

Conread position: 61-366
Cow position: chr11:63434216-63433908 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 46, 5

Conread position: 61-379
Cow position: chr11:51729128-51729447 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 50, 5

Conread position: 64-306
Cow position: chr11:86720569-86720323 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 10

Conread position: 64-325
Cow position: chr11:25386905-25387182 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 210

Conread position: 65-396
Cow position: chr11:48295875-48296212 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 97

Conread position: 65-417
Cow position: chr11:259330-258965 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 108

Conread position: 66-306
Cow position: chr11:8840894-8840661 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 63

Conread position: 66-311
Cow position: chr11:41271985-41272236 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 145

Conread position: 66-312
Cow position: chr11:56821410-56821143 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 27, 215

Conread position: 66-314
Cow position: chr11:5031931-5031673 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 102

Conread position: 66-314
Cow position: chr11:15373695-15373943 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 101

Conread position: 66-323
Cow position: chr11:17831375-17831110 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 16, 118

Conread position: 66-324
Cow position: chr11:63909814-63909553 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 24, 84

Conread position: 66-325
Cow position: chr11:6202290-6202559 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 45, 101

Conread position: 66-325
Cow position: chr11:16907199-16906936 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 28

Conread position: 66-325
Cow position: chr11:30954842-30955115 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 108

Conread position: 66-325
Cow position: chr11:61958903-61958630 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 26, 89

Conread position: 66-327
Cow position: chr11:40479011-40478738 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 16, 106

Conread position: 66-338
Cow position: chr11:41027-41305 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 48, 62

Conread position: 66-343
Cow position: chr11:70086168-70086463 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 211

Conread position: 66-347
Cow position: chr11:71341608-71341327 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 97, 11

Conread position: 66-354
Cow position: chr11:32693628-32693339 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 98

Conread position: 66-363
Cow position: chr11:76889892-76890202 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 87

Conread position: 66-371
Cow position: chr11:71390720-71390408 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 206

Conread position: 66-374
Cow position: chr11:8525267-8524949 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 220
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 101

Conread position: 66-374
Cow position: chr11:34145070-34144750 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 242
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 45, 27

Conread position: 66-379
Cow position: chr11:6245165-6245494 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 25, 98

Conread position: 66-392
Cow position: chr11:30830772-30830440 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 97

Conread position: 66-392
Cow position: chr11:84385794-84385455 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 103

Conread position: 66-393
Cow position: chr11:31413296-31413641 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 231
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 98

Conread position: 66-397
Cow position: chr11:24438381-24438031 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 212

Conread position: 66-397
Cow position: chr11:64048262-64048581 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 132, 49

Conread position: 66-398
Cow position: chr11:30639102-30638757 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 28, 99

Conread position: 66-398
Cow position: chr11:62239590-62239934 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 135

Conread position: 66-398
Cow position: chr11:71493014-71492672 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 258
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 104

Conread position: 66-399
Cow position: chr11:18509175-18508840 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 22, 103

Conread position: 66-399
Cow position: chr11:75874908-75874582 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 82

Conread position: 66-400
Cow position: chr11:2907675-2907335 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 252
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 97

Conread position: 66-400
Cow position: chr11:45619193-45619543 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 82

Conread position: 66-400
Cow position: chr11:55052730-55053055 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 232
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 45, 82

Conread position: 66-401
Cow position: chr11:26535622-26535971 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 26

Conread position: 66-402
Cow position: chr11:30475846-30476189 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 74

Conread position: 66-402
Cow position: chr11:34646435-34646794 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 34, 93

Conread position: 66-402
Cow position: chr11:65607847-65607493 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 41, 101

Conread position: 66-402
Cow position: chr11:80923480-80923132 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 45, 150

Conread position: 66-404
Cow position: chr11:9270884-9270542 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 123

Conread position: 67-347
Cow position: chr11:69075753-69076047 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 208

Conread position: 68-392
Cow position: chr11:66572656-66572309 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 206

Conread position: 69-301
Cow position: chr11:45898206-45897959 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 39, 93

Conread position: 69-326
Cow position: chr11:70278262-70277997 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 99

Conread position: 69-351
Cow position: chr11:56187466-56187750 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 158

Conread position: 69-366
Cow position: chr11:28993885-28993590 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 42, 98

Conread position: 69-395
Cow position: chr11:63435364-63435714 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 204

Conread position: 69-397
Cow position: chr11:67600629-67600966 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 98

Conread position: 69-403
Cow position: chr11:70600974-70600626 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 143

Conread position: 69-405
Cow position: chr11:35213314-35212969 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 42, 24

Conread position: 70-366
Cow position: chr11:8545165-8544858 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 24, 97

Conread position: 70-366
Cow position: chr11:32254371-32254058 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 202

Conread position: 70-366
Cow position: chr11:38670530-38670848 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 70-398
Cow position: chr11:72375838-72375471 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 263
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 23, 185

Conread position: 71-364
Cow position: chr11:84228865-84228567 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 153

Conread position: 71-366
Cow position: chr11:7873996-7874298 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 224
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 90

Conread position: 71-374
Cow position: chr11:10095195-10095512 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 91

Conread position: 71-374
Cow position: chr11:30209972-30209654 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 14

Conread position: 71-379
Cow position: chr11:70250774-70251087 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 39, 51

Conread position: 71-394
Cow position: chr11:42016787-42016454 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 233
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 95

Conread position: 71-394
Cow position: chr11:70756340-70756664 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 42, 22

Conread position: 72-296
Cow position: chr11:60143450-60143217 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 181

Conread position: 72-356
Cow position: chr11:53510644-53510353 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 12, 26

Conread position: 72-379
Cow position: chr11:45434936-45435248 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 36, 132

Conread position: 73-325
Cow position: chr11:6633562-6633825 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 111

Conread position: 73-325
Cow position: chr11:63917616-63917362 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 69

Conread position: 73-360
Cow position: chr11:49934887-49934591 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 221
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 17, 204

Conread position: 73-402
Cow position: chr11:46329351-46329697 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 233
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 88

Conread position: 74-393
Cow position: chr11:75285904-75285572 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 221
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 95, 35

Conread position: 75-361
Cow position: chr11:85703558-85703842 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 93

Conread position: 75-373
Cow position: chr11:37804702-37804384 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 19, 88

Conread position: 76-415
Cow position: chr11:49057256-49057592 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 157

Conread position: 80-323
Cow position: chr11:38577905-38577668 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 35, 45

Conread position: 80-402
Cow position: chr11:59024487-59024157 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 96

Conread position: 81-353
Cow position: chr11:83925918-83926185 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 40, 82

Conread position: 81-395
Cow position: chr11:83397773-83398093 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 32, 96

Conread position: 81-399
Cow position: chr11:15772846-15772523 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 32, 12

Conread position: 83-374
Cow position: chr11:67615382-67615083 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 116

Conread position: 84-401
Cow position: chr11:70206184-70206507 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 8, 45

Conread position: 85-310
Cow position: chr11:33345315-33345545 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 28, 174

Conread position: 86-271
Cow position: chr11:21398827-21399026 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 87-354
Cow position: chr11:372821-372559 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 23

Conread position: 87-393
Cow position: chr11:38334391-38334705 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 74

Conread position: 90-355
Cow position: chr11:69307377-69307659 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 184

Conread position: 90-399
Cow position: chr11:50472197-50472514 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 13

Conread position: 91-281
Cow position: chr11:75965770-75965582 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 106, 24

Conread position: 93-402
Cow position: chr11:42066740-42067057 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 234
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 77, 30

Conread position: 96-374
Cow position: chr11:80413129-80412840 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 17, 48

Conread position: 97-400
Cow position: chr11:52690643-52690332 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 22, 66

Conread position: 100-397
Cow position: chr11:30210794-30211073 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 67, 45

Conread position: 105-309
Cow position: chr11:12111561-12111361 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 92, 110

Conread position: 107-398
Cow position: chr11:47837204-47837511 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 58

Conread position: 108-361
Cow position: chr11:48659826-48660083 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 5, 159

Conread position: 109-374
Cow position: chr11:3739849-3740133 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 44

Conread position: 109-398
Cow position: chr11:67615033-67614736 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 8, 162

Conread position: 111-349
Cow position: chr11:41293919-41293678 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 56, 46

Conread position: 111-366
Cow position: chr11:23407360-23407618 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 60

Conread position: 111-374
Cow position: chr11:42296719-42296458 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 42

Conread position: 111-386
Cow position: chr11:87155418-87155698 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 42

Conread position: 111-392
Cow position: chr11:62789027-62789310 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 56, 151

Conread position: 111-396
Cow position: chr11:48085814-48086105 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 196
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 63, 133

Conread position: 111-407
Cow position: chr11:33824992-33824709 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 197, 42

Conread position: 112-324
Cow position: chr11:14466589-14466374 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 134

Conread position: 112-357
Cow position: chr11:53462843-53463091 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 41

Conread position: 112-361
Cow position: chr11:63202348-63202094 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 30

Conread position: 112-366
Cow position: chr11:31874992-31875252 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 16

Conread position: 112-373
Cow position: chr11:19592091-19591828 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 76, 41

Conread position: 112-374
Cow position: chr11:62742734-62742479 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 208
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 86, 31

Conread position: 112-379
Cow position: chr11:46998884-46999159 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 40

Conread position: 112-394
Cow position: chr11:30808702-30808407 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 159

Conread position: 112-396
Cow position: chr11:375354-375646 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 140

Conread position: 112-396
Cow position: chr11:43360883-43360600 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 105

Conread position: 112-396
Cow position: chr11:63999190-63998903 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 41

Conread position: 112-397
Cow position: chr11:30493898-30494176 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 87, 39

Conread position: 112-398
Cow position: chr11:6194307-6194583 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 87, 45

Conread position: 112-398
Cow position: chr11:14470270-14470554 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 57, 30

Conread position: 112-398
Cow position: chr11:16314772-16315065 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 39

Conread position: 112-398
Cow position: chr11:40608697-40608404 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 56, 150

Conread position: 112-398
Cow position: chr11:49872987-49872698 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 55, 41

Conread position: 112-399
Cow position: chr11:27719423-27719149 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 25, 119

Conread position: 112-401
Cow position: chr11:48429006-48429311 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 95

Conread position: 112-402
Cow position: chr11:81143650-81143349 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 78

Conread position: 113-323
Cow position: chr11:40573432-40573223 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 52, 44

Conread position: 114-332
Cow position: chr11:83033335-83033118 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 83, 144

Conread position: 114-394
Cow position: chr11:83032583-83032862 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 85, 39

Conread position: 114-395
Cow position: chr11:42160159-42159871 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 150

Conread position: 117-361
Cow position: chr11:4199177-4199427 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 84, 34

Conread position: 119-314
Cow position: chr11:31506751-31506952 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 128

Conread position: 120-398
Cow position: chr11:30165419-30165700 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 95, 33

Conread position: 120-400
Cow position: chr11:40395346-40395630 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 17

Conread position: 120-402
Cow position: chr11:8437782-8437496 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 97

Conread position: 121-361
Cow position: chr11:30370016-30370255 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 32, 103

Conread position: 121-400
Cow position: chr11:47311076-47310793 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 56

Conread position: 122-314
Cow position: chr11:4653068-4652869 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 39, 143

Conread position: 122-393
Cow position: chr11:17676461-17676191 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 77, 31

Conread position: 122-398
Cow position: chr11:35536497-35536764 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 77, 31

Conread position: 122-402
Cow position: chr11:19946345-19946615 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 223
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 51, 14

Conread position: 122-410
Cow position: chr11:41603780-41603499 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 39, 142

Conread position: 125-324
Cow position: chr11:62778359-62778555 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 62, 37

Conread position: 125-395
Cow position: chr11:32398549-32398827 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 32

Conread position: 126-374
Cow position: chr11:26633106-26632844 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 16

Conread position: 128-320
Cow position: chr11:79019145-79018949 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 134

Conread position: 128-356
Cow position: chr11:22747414-22747187 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 19

Conread position: 128-374
Cow position: chr11:33409345-33409097 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 71, 44

Conread position: 128-401
Cow position: chr11:84890805-84890535 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 118

Conread position: 128-415
Cow position: chr11:47724818-47725095 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 23

Conread position: 129-356
Cow position: chr11:35926990-35926760 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 45, 28

Conread position: 129-373
Cow position: chr11:41313740-41313494 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 32

Conread position: 129-401
Cow position: chr11:1067526-1067243 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 24, 114

Conread position: 130-312
Cow position: chr11:69652867-69652681 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 133

Conread position: 130-397
Cow position: chr11:18785954-18785708 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 88

Conread position: 130-398
Cow position: chr11:8669925-8670213 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 137

Conread position: 130-402
Cow position: chr11:17721887-17721608 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 77

Conread position: 131-378
Cow position: chr11:36920661-36920406 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 36, 135

Conread position: 132-324
Cow position: chr11:35803053-35803250 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 132-372
Cow position: chr11:27565255-27565483 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 66, 25

Conread position: 134-360
Cow position: chr11:31410962-31410728 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 35, 132

Conread position: 134-379
Cow position: chr11:67312692-67312958 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 16, 136

Conread position: 136-412
Cow position: chr11:4637250-4636972 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 129

Conread position: 151-393
Cow position: chr11:1932550-1932304 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 26

Conread position: 152-402
Cow position: chr11:78820091-78820349 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 10, 33

Conread position: 157-388
Cow position: chr11:18910930-18910704 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 12

Conread position: 158-393
Cow position: chr11:5219214-5218979 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 22

Conread position: 158-402
Cow position: chr11:37436039-37435792 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 9

Conread position: 159-374
Cow position: chr11:58927529-58927737 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 77

Conread position: 159-379
Cow position: chr11:39249918-39250137 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 82

Conread position: 159-401
Cow position: chr11:25119986-25119744 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 14, 100

Conread position: 161-392
Cow position: chr11:21885782-21886013 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 19

Conread position: 162-325
Cow position: chr11:56290461-56290626 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 37, 9

Conread position: 162-361
Cow position: chr11:62889945-62889739 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 102

Conread position: 163-374
Cow position: chr11:38211595-38211810 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 98

Conread position: 164-379
Cow position: chr11:63484897-63485105 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 197, 34

Conread position: 164-399
Cow position: chr11:27462147-27461916 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 76

Conread position: 165-366
Cow position: chr11:27449659-27449474 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 34, 58

Conread position: 167-364
Cow position: chr11:18447538-18447345 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 32, 91

Conread position: 167-402
Cow position: chr11:4225051-4225278 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 64

Conread position: 167-402
Cow position: chr11:77013738-77013966 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 70

Conread position: 168-325
Cow position: chr11:30888328-30888165 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 168-362
Cow position: chr11:62812995-62812798 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 95

Conread position: 168-393
Cow position: chr11:30172264-30172483 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 31, 66

Conread position: 168-396
Cow position: chr11:35669997-35669779 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 31, 93

Conread position: 168-398
Cow position: chr11:62663277-62663047 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 31, 90

Conread position: 168-400
Cow position: chr11:18924700-18924938 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 217

Conread position: 168-401
Cow position: chr11:71854324-71854088 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 73

Conread position: 169-374
Cow position: chr11:30964302-30964512 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 19, 30

Conread position: 169-374
Cow position: chr11:37425186-37424989 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 34

Conread position: 169-397
Cow position: chr11:897629-897857 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 95

Conread position: 170-366
Cow position: chr11:86895336-86895530 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 91

Conread position: 170-374
Cow position: chr11:35109581-35109371 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 72

Conread position: 170-400
Cow position: chr11:28078460-28078682 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 69

Conread position: 171-399
Cow position: chr11:58173583-58173817 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 92

Conread position: 173-399
Cow position: chr11:84763997-84764210 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 19

Conread position: 175-325
Cow position: chr11:30272969-30272825 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 67

Conread position: 176-390
Cow position: chr11:29786536-29786312 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 85

Conread position: 177-394
Cow position: chr11:46427444-46427222 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 83

Conread position: 182-373
Cow position: chr11:64408945-64409134 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 6, 11

Conread position: 185-369
Cow position: chr11:9698874-9699052 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 77

Conread position: 185-400
Cow position: chr11:43914263-43914486 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 56

Conread position: 192-364
Cow position: chr11:79707697-79707859 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 46

Conread position: 192-397
Cow position: chr11:47784753-47784968 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 69

Conread position: 193-396
Cow position: chr11:46784455-46784650 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 70

Conread position: 195-400
Cow position: chr11:17517385-17517597 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 41

Conread position: 195-401
Cow position: chr11:81041983-81041775 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 26, 64

Conread position: 196-400
Cow position: chr11:15366985-15366785 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 63

Conread position: 210-361
Cow position: chr11:37041975-37042127 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 94, 9

Conread position: 210-406
Cow position: chr11:19148135-19147937 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 26

Conread position: 211-363
Cow position: chr11:68312937-68313082 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 27

Conread position: 211-398
Cow position: chr11:80296848-80296671 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 15

Conread position: 213-372
Cow position: chr11:47904124-47904300 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 5, 171

Conread position: 213-396
Cow position: chr11:8422114-8421938 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 48

Conread position: 214-379
Cow position: chr11:36300575-36300411 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 63, 44

Conread position: 214-392
Cow position: chr11:30986644-30986819 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 44

Conread position: 214-399
Cow position: chr11:49396523-49396336 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 45

Conread position: 214-400
Cow position: chr11:63499124-63498940 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 42

Conread position: 214-401
Cow position: chr11:69417408-69417595 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 43

Conread position: 214-402
Cow position: chr11:18777593-18777394 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 21

Conread position: 214-402
Cow position: chr11:58185885-58186065 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 15, 45

Conread position: 215-379
Cow position: chr11:15279005-15278845 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 93, 44

Conread position: 215-379
Cow position: chr11:30843011-30842852 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 44

Conread position: 215-391
Cow position: chr11:4621422-4621253 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 9, 0

Conread position: 215-392
Cow position: chr11:20205844-20205675 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 215-396
Cow position: chr11:2484787-2484608 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 18

Conread position: 215-397
Cow position: chr11:4653251-4653072 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 25

Conread position: 215-397
Cow position: chr11:66685898-66685722 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 36

Conread position: 215-398
Cow position: chr11:46884381-46884568 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 43

Conread position: 215-399
Cow position: chr11:19549491-19549668 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 14

Conread position: 215-400
Cow position: chr11:36092909-36092726 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 109, 25

Conread position: 217-396
Cow position: chr11:69676343-69676168 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 41

Conread position: 217-398
Cow position: chr11:46010241-46010064 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 12

Conread position: 219-361
Cow position: chr11:72401721-72401582 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 39

Conread position: 219-396
Cow position: chr11:23278953-23278776 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 41

Conread position: 219-402
Cow position: chr11:76896363-76896177 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 39

Conread position: 220-322
Cow position: chr11:35860595-35860692 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 220-360
Cow position: chr11:4411856-4411721 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 220-361
Cow position: chr11:30894991-30894850 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 88, 40

Conread position: 220-374
Cow position: chr11:2835871-2836029 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 35

Conread position: 220-374
Cow position: chr11:48315384-48315230 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 83, 32

Conread position: 220-379
Cow position: chr11:37100160-37099999 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 34

Conread position: 220-379
Cow position: chr11:66104383-66104220 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 27, 50

Conread position: 220-381
Cow position: chr11:49207723-49207886 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 16

Conread position: 220-396
Cow position: chr11:9699232-9699065 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 140, 47

Conread position: 220-396
Cow position: chr11:63866647-63866474 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 35

Conread position: 220-398
Cow position: chr11:68570368-68570187 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 15

Conread position: 220-402
Cow position: chr11:71022013-71022193 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 83, 35

Conread position: 220-403
Cow position: chr11:29482423-29482247 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 35

Conread position: 221-335
Cow position: chr11:11523444-11523330 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 102, 12

Conread position: 221-393
Cow position: chr11:41278199-41278371 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 87, 37

Conread position: 221-398
Cow position: chr11:25721981-25721816 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 23

Conread position: 221-402
Cow position: chr11:42206435-42206609 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 83, 34

Conread position: 222-391
Cow position: chr11:4602163-4602333 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 6

Conread position: 224-397
Cow position: chr11:83249419-83249589 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 36

Conread position: 225-354
Cow position: chr11:44859269-44859141 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 80, 32

Conread position: 226-361
Cow position: chr11:7617188-7617055 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 30

Conread position: 226-366
Cow position: chr11:53487135-53487002 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 29

Conread position: 226-366
Cow position: chr11:60720437-60720296 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 82, 32

Conread position: 226-366
Cow position: chr11:62081949-62081814 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 120
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 29, 0

Conread position: 226-366
Cow position: chr11:78672689-78672829 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 29

Conread position: 226-374
Cow position: chr11:30654674-30654817 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 78, 29

Conread position: 226-379
Cow position: chr11:56114959-56115110 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 29

Conread position: 226-393
Cow position: chr11:54872741-54872576 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 80, 29

Conread position: 226-395
Cow position: chr11:63483961-63484126 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 29

Conread position: 226-396
Cow position: chr11:62483943-62483787 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 134, 34

Conread position: 226-396
Cow position: chr11:71814725-71814889 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 137, 31

Conread position: 226-399
Cow position: chr11:8264604-8264427 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 29

Conread position: 226-400
Cow position: chr11:25968835-25968660 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 82, 20

Conread position: 226-401
Cow position: chr11:74839629-74839801 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 150, 34

Conread position: 226-402
Cow position: chr11:44619973-44620147 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 36

Conread position: 226-402
Cow position: chr11:80370133-80370307 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 8

Conread position: 227-400
Cow position: chr11:44615148-44614975 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 76, 152

Conread position: 227-401
Cow position: chr11:32800645-32800821 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 29

Conread position: 228-394
Cow position: chr11:63695825-63695652 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 30

Conread position: 228-397
Cow position: chr11:77241726-77241890 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 77, 6

Conread position: 228-398
Cow position: chr11:44176617-44176787 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 8

Conread position: 229-371
Cow position: chr11:76248072-76248212 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 5

Conread position: 229-372
Cow position: chr11:63475650-63475504 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 7

Conread position: 229-398
Cow position: chr11:35733061-35732894 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 7

Conread position: 229-401
Cow position: chr11:33369173-33369350 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 5

Conread position: 229-401
Cow position: chr11:81175619-81175790 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 81, 7

Conread position: 229-402
Cow position: chr11:57767212-57767384 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 5

Conread position: 233-398
Cow position: chr11:15591449-15591290 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 127, 22

Conread position: 234-378
Cow position: chr11:21173411-21173265 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 24

Conread position: 234-392
Cow position: chr11:75915020-75915174 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 126, 21

Conread position: 234-394
Cow position: chr11:62102421-62102261 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 24

Conread position: 236-354
Cow position: chr11:6413670-6413553 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 22

Conread position: 236-354
Cow position: chr11:34279771-34279891 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 19

Conread position: 236-354
Cow position: chr11:37490548-37490431 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 23

Conread position: 236-379
Cow position: chr11:6154587-6154741 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 150

Conread position: 236-398
Cow position: chr11:36266238-36266072 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 19

Conread position: 236-400
Cow position: chr11:58575362-58575202 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 112, 21

Conread position: 237-400
Cow position: chr11:81340511-81340351 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 120, 18

Conread position: 237-402
Cow position: chr11:17369560-17369719 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 67, 21

Conread position: 237-408
Cow position: chr11:43641416-43641589 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 18

Conread position: 238-354
Cow position: chr11:27688360-27688245 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 17

Conread position: 238-361
Cow position: chr11:1841994-1842110 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 241-396
Cow position: chr11:75388341-75388190 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 244-403
Cow position: chr11:7928710-7928877 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 11

Conread position: 259-396
Cow position: chr11:32587076-32586939 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 120

Conread position: 259-396
Cow position: chr11:82733102-82732963 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 104, 52

Conread position: 259-398
Cow position: chr11:63977105-63977244 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 110

Conread position: 260-396
Cow position: chr11:86925912-86925777 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 37

Conread position: 261-379
Cow position: chr11:2310125-2310240 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 51

Conread position: 264-396
Cow position: chr11:12528225-12528097 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 265-398
Cow position: chr11:68592071-68592208 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 43, 120

Conread position: 269-379
Cow position: chr11:22583018-22583124 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Show alignments to all cow chromosomes.