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Cow genome map

           
Conread name:
           
rfty509b_i5.y2
        

               
Conread position:
               
1-171
               

               
Cow position:
               
chr18:47872859-47873032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr18:7058985-7059189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr18:21205121-21205331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr18:33606387-33606598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr18:268056-267801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:46436997-46436735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr18:44484004-44483711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr18:44802129-44801813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr18:45570776-45571088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:56172265-56171932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
53, 36
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr18:50082490-50082173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:4540121-4539797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr18:25282800-25282467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
31, 38
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr18:33157576-33157903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr18:36458689-36459019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr18:7952401-7952729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr18:4535230-4534931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
200, 36
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:21192654-21192314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:25647495-25647148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr18:30794189-30794526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr18:52635328-52634966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr18:47517454-47517095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr18:48453448-48453785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:54974235-54973885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
24, 202
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr18:55789237-55788864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr18:19273350-19272964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr18:51691713-51691330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
50, 36
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr18:29356875-29356497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr18:55498817-55499206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr18:9365667-9366063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr18:15614093-15613723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
110, 36
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr18:19849996-19849630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr18:39002039-39001672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 20
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr18:46048516-46048905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr18:22121127-22120733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
51, 36
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr18:22790320-22789938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr18:33158718-33159095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
60, 45
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr18:40758970-40759373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr18:22214242-22214632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
31, 278
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr18:4758273-4757878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr18:45904137-45903739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
48, 36
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr18:39875503-39875089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr18:56181700-56181302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr18:10575863-10576268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:9089457-9089857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:30360365-30359971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
112, 36
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:31725133-31724711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
40, 206
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:44262377-44262789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:4490119-4489732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:29958392-29958008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
111, 36
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:42432333-42431920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:51406149-51405747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr18:1144440-1144023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr18:5766184-5766582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 36
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr18:28658159-28657750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:9010486-9010875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
66, 61
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:11691657-11691236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:31672752-31672348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:50382012-50382420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr18:2592418-2591989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr18:11322347-11322756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr18:12058772-12059165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr18:9974571-9974158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr18:15172787-15173176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr18:19193595-19193199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr18:21195583-21195175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr18:42431853-42431436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr18:46453123-46452711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
53, 36
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr18:3132988-3132605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr18:22056099-22055687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr18:3180175-3180589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr18:11867102-11867512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr18:20641730-20641327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr18:55692576-55692995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr18:6309835-6310258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
36, 166
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr18:10322555-10322972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr18:12023878-12023464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr18:17649981-17649561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
69, 37
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr18:38985442-38985866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr18:18919198-18918787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 165
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr18:33299652-33300063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 133
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr18:12776018-12775601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
50, 36
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr18:28101381-28101815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr18:35582346-35582113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr18:11684744-11685060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr18:10656201-10656526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 35
               

               
Conread position:
               
2-361
               

               
Cow position:
               
chr18:20174374-20174001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:37382342-37381950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
2-374
               

               
Cow position:
               
chr18:3158846-3158431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
2-388
               

               
Cow position:
               
chr18:42747351-42747761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr18:7955898-7956317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr18:51756853-51757267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 152
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr18:11779422-11779821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
67, 35
               

               
Conread position:
               
2-398
               

               
Cow position:
               
chr18:4668736-4668330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
2-398
               

               
Cow position:
               
chr18:7964987-7965406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr18:29371624-29372045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr18:39662541-39662956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
3-168
               

               
Cow position:
               
chr18:24636271-24636440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr18:16417940-16417689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr18:4078561-4078844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
3-321
               

               
Cow position:
               
chr18:38606993-38607316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr18:52854822-52855152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chr18:21768384-21768712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr18:49655471-49655822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr18:45104690-45104257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
34, 286
               

               
Conread position:
               
3-398
               

               
Cow position:
               
chr18:32883058-32883465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
47, 34
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr18:7649751-7650157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 172
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr18:13507974-13507672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
4-402
               

               
Cow position:
               
chr18:17391216-17390814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
53, 34
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr18:4182430-4182121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
7-301
               

               
Cow position:
               
chr18:3166726-3166415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 30
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr18:4666452-4666140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chr18:6610096-6609767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
7-354
               

               
Cow position:
               
chr18:24508444-24508095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
160, 30
               

               
Conread position:
               
7-379
               

               
Cow position:
               
chr18:12242041-12242433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
7-398
               

               
Cow position:
               
chr18:17005011-17005421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
7-398
               

               
Cow position:
               
chr18:23630816-23630443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
8-402
               

               
Cow position:
               
chr18:43950606-43951006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
9-321
               

               
Cow position:
               
chr18:56159227-56159556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 28
               

               
Conread position:
               
9-359
               

               
Cow position:
               
chr18:16227324-16227695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
10-367
               

               
Cow position:
               
chr18:4496124-4495748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
11-395
               

               
Cow position:
               
chr18:39115379-39114945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
14-217
               

               
Cow position:
               
chr18:15340672-15340454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
14-332
               

               
Cow position:
               
chr18:43020622-43020300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
14-398
               

               
Cow position:
               
chr18:33504487-33504088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 242
               

               
Conread position:
               
14-401
               

               
Cow position:
               
chr18:33896655-33896236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
14-402
               

               
Cow position:
               
chr18:4955244-4955636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 23
               

               
Conread position:
               
15-309
               

               
Cow position:
               
chr18:35012537-35012236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
22-306
               

               
Cow position:
               
chr18:2619421-2619134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
22-321
               

               
Cow position:
               
chr18:4673088-4673399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
23-379
               

               
Cow position:
               
chr18:48713330-48713698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
23-396
               

               
Cow position:
               
chr18:10891303-10891681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
23-396
               

               
Cow position:
               
chr18:31082554-31082173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 14
               

               
Conread position:
               
25-299
               

               
Cow position:
               
chr18:21102990-21102704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
24, 12
               

               
Conread position:
               
45-389
               

               
Cow position:
               
chr18:18962029-18961669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
44, 118
               

               
Conread position:
               
46-398
               

               
Cow position:
               
chr18:5072608-5072245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 116
               

               
Conread position:
               
49-325
               

               
Cow position:
               
chr18:48633603-48633872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 112
               

               
Conread position:
               
53-398
               

               
Cow position:
               
chr18:27078701-27079045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
7, 73
               

               
Conread position:
               
58-399
               

               
Cow position:
               
chr18:1571400-1571059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
58-400
               

               
Cow position:
               
chr18:727858-728195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
61-310
               

               
Cow position:
               
chr18:36746430-36746175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
26, 5
               

               
Conread position:
               
61-321
               

               
Cow position:
               
chr18:37023728-37023455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 5
               

               
Conread position:
               
63-361
               

               
Cow position:
               
chr18:23821991-23821693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
65-303
               

               
Cow position:
               
chr18:18369535-18369286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 202
               

               
Conread position:
               
65-368
               

               
Cow position:
               
chr18:55000908-55000595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 90
               

               
Conread position:
               
65-374
               

               
Cow position:
               
chr18:11183773-11184091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 98
               

               
Conread position:
               
65-375
               

               
Cow position:
               
chr18:29648613-29648933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
43, 165
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr18:28930802-28930475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
66-314
               

               
Cow position:
               
chr18:38686923-38687168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
53, 91
               

               
Conread position:
               
66-325
               

               
Cow position:
               
chr18:16686508-16686240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
66-325
               

               
Cow position:
               
chr18:36230891-36230628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
41, 197
               

               
Conread position:
               
66-345
               

               
Cow position:
               
chr18:39434656-39434943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
66-351
               

               
Cow position:
               
chr18:51392813-51392519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
26, 102
               

               
Conread position:
               
66-358
               

               
Cow position:
               
chr18:8299842-8300158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
45, 118
               

               
Conread position:
               
66-361
               

               
Cow position:
               
chr18:9066527-9066836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 210
               

               
Conread position:
               
66-366
               

               
Cow position:
               
chr18:39623627-39623945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
66-366
               

               
Cow position:
               
chr18:50974467-50974144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
66-374
               

               
Cow position:
               
chr18:48828953-48828631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
23, 102
               

               
Conread position:
               
66-393
               

               
Cow position:
               
chr18:32873422-32873763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 99
               

               
Conread position:
               
66-395
               

               
Cow position:
               
chr18:42479759-42479411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
45, 205
               

               
Conread position:
               
66-395
               

               
Cow position:
               
chr18:55119710-55120036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 41
               

               
Conread position:
               
66-398
               

               
Cow position:
               
chr18:10977378-10977043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 132
               

               
Conread position:
               
66-398
               

               
Cow position:
               
chr18:29065545-29065217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
66-402
               

               
Cow position:
               
chr18:7108955-7109309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
28, 103
               

               
Conread position:
               
67-301
               

               
Cow position:
               
chr18:56165818-56166056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
68-402
               

               
Cow position:
               
chr18:3211702-3212061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
20, 211
               

               
Conread position:
               
69-306
               

               
Cow position:
               
chr18:29796593-29796349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
69-314
               

               
Cow position:
               
chr18:51850728-51850478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
69-359
               

               
Cow position:
               
chr18:2774299-2774002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
69-379
               

               
Cow position:
               
chr18:247850-247541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
69-379
               

               
Cow position:
               
chr18:6881516-6881202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 92
               

               
Conread position:
               
69-396
               

               
Cow position:
               
chr18:11790765-11791092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
69-401
               

               
Cow position:
               
chr18:1954758-1954405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
69-407
               

               
Cow position:
               
chr18:30586388-30586051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 195
               

               
Conread position:
               
70-323
               

               
Cow position:
               
chr18:4204092-4203833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
71-324
               

               
Cow position:
               
chr18:19896622-19896355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 140
               

               
Conread position:
               
71-332
               

               
Cow position:
               
chr18:27109463-27109183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
71-397
               

               
Cow position:
               
chr18:7415195-7414863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 99
               

               
Conread position:
               
71-397
               

               
Cow position:
               
chr18:15517331-15517000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
71-397
               

               
Cow position:
               
chr18:43555691-43555342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
40, 96
               

               
Conread position:
               
71-401
               

               
Cow position:
               
chr18:54572459-54572108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
18, 107
               

               
Conread position:
               
72-321
               

               
Cow position:
               
chr18:56191136-56190869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 188
               

               
Conread position:
               
73-366
               

               
Cow position:
               
chr18:18592325-18592605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 31
               

               
Conread position:
               
74-305
               

               
Cow position:
               
chr18:11377205-11377442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
75-378
               

               
Cow position:
               
chr18:24266575-24266246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
77-395
               

               
Cow position:
               
chr18:4264542-4264227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
36, 96
               

               
Conread position:
               
77-405
               

               
Cow position:
               
chr18:42290482-42290154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
77-405
               

               
Cow position:
               
chr18:42293210-42292882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
80-392
               

               
Cow position:
               
chr18:2146732-2146425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
84-300
               

               
Cow position:
               
chr18:40035843-40036065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
86-379
               

               
Cow position:
               
chr18:51643517-51643213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
26, 164
               

               
Conread position:
               
87-400
               

               
Cow position:
               
chr18:6005645-6005325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
97-397
               

               
Cow position:
               
chr18:50959354-50959660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
99-398
               

               
Cow position:
               
chr18:51178840-51178538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 17
               

               
Conread position:
               
108-390
               

               
Cow position:
               
chr18:53053366-53053062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
111-396
               

               
Cow position:
               
chr18:36768921-36768643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
111-397
               

               
Cow position:
               
chr18:8171202-8170919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
100, 149
               

               
Conread position:
               
112-322
               

               
Cow position:
               
chr18:19883414-19883629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
49, 151
               

               
Conread position:
               
112-360
               

               
Cow position:
               
chr18:2864110-2863862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 156
               

               
Conread position:
               
112-366
               

               
Cow position:
               
chr18:9846512-9846278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
112-366
               

               
Cow position:
               
chr18:35873962-35874219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
112-374
               

               
Cow position:
               
chr18:26998766-26999041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
112-374
               

               
Cow position:
               
chr18:49038344-49038606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
49, 153
               

               
Conread position:
               
112-375
               

               
Cow position:
               
chr18:4556281-4556011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 51
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr18:5189803-5189535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
112-383
               

               
Cow position:
               
chr18:47967039-47966775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 45
               

               
Conread position:
               
112-389
               

               
Cow position:
               
chr18:49841163-49841450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
68, 147
               

               
Conread position:
               
112-392
               

               
Cow position:
               
chr18:23162777-23163061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
112-396
               

               
Cow position:
               
chr18:47511890-47512165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
112-398
               

               
Cow position:
               
chr18:10214311-10214014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
54, 156
               

               
Conread position:
               
112-398
               

               
Cow position:
               
chr18:12273542-12273832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
87, 64
               

               
Conread position:
               
112-398
               

               
Cow position:
               
chr18:29474625-29474911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
112-400
               

               
Cow position:
               
chr18:12584959-12584668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
51, 155
               

               
Conread position:
               
112-401
               

               
Cow position:
               
chr18:49017387-49017666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
56, 43
               

               
Conread position:
               
112-402
               

               
Cow position:
               
chr18:48242074-48242359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
112-403
               

               
Cow position:
               
chr18:5632150-5632447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
63, 134
               

               
Conread position:
               
112-414
               

               
Cow position:
               
chr18:30341289-30340994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
114-401
               

               
Cow position:
               
chr18:14586578-14586304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
115-366
               

               
Cow position:
               
chr18:24759768-24759518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
84, 42
               

               
Conread position:
               
116-398
               

               
Cow position:
               
chr18:43797065-43796781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 44
               

               
Conread position:
               
119-355
               

               
Cow position:
               
chr18:46647257-46647033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 21
               

               
Conread position:
               
119-393
               

               
Cow position:
               
chr18:36264874-36264614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
119-393
               

               
Cow position:
               
chr18:53642861-53642582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
42, 144
               

               
Conread position:
               
120-331
               

               
Cow position:
               
chr18:1732969-1732771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
120-364
               

               
Cow position:
               
chr18:20175299-20175055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
121-319
               

               
Cow position:
               
chr18:56044450-56044645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
121-379
               

               
Cow position:
               
chr18:19157780-19158031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
121-395
               

               
Cow position:
               
chr18:37303038-37303323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
49, 32
               

               
Conread position:
               
122-371
               

               
Cow position:
               
chr18:35367292-35367056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
125-318
               

               
Cow position:
               
chr18:34220024-34219824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 28
               

               
Conread position:
               
125-325
               

               
Cow position:
               
chr18:4871971-4872162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 32
               

               
Conread position:
               
125-392
               

               
Cow position:
               
chr18:32189613-32189351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
129-394
               

               
Cow position:
               
chr18:1931553-1931291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
130-314
               

               
Cow position:
               
chr18:5711747-5711565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
130-359
               

               
Cow position:
               
chr18:7481054-7481285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
131-402
               

               
Cow position:
               
chr18:47416897-47417180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 140
               

               
Conread position:
               
132-355
               

               
Cow position:
               
chr18:48961838-48962069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
132-397
               

               
Cow position:
               
chr18:5701154-5701435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
134-366
               

               
Cow position:
               
chr18:49015032-49015257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
134-379
               

               
Cow position:
               
chr18:35535244-35534994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
17, 130
               

               
Conread position:
               
134-401
               

               
Cow position:
               
chr18:1399445-1399177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
134-402
               

               
Cow position:
               
chr18:22569161-22568892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
66, 131
               

               
Conread position:
               
135-379
               

               
Cow position:
               
chr18:32243820-32243584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
5, 22
               

               
Conread position:
               
136-311
               

               
Cow position:
               
chr18:56301798-56301976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
136-347
               

               
Cow position:
               
chr18:51212751-51212956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
137-379
               

               
Cow position:
               
chr18:21782602-21782841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
138-316
               

               
Cow position:
               
chr18:4624237-4624060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
138-380
               

               
Cow position:
               
chr18:29091654-29091885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
149-374
               

               
Cow position:
               
chr18:5647732-5647960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
151-379
               

               
Cow position:
               
chr18:35889171-35888932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
154-379
               

               
Cow position:
               
chr18:47548059-47547826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
156-354
               

               
Cow position:
               
chr18:912177-911984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 109
               

               
Conread position:
               
157-366
               

               
Cow position:
               
chr18:50359257-50359466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
6, 107
               

               
Conread position:
               
158-379
               

               
Cow position:
               
chr18:14225324-14225544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
158-397
               

               
Cow position:
               
chr18:51383462-51383227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
160-397
               

               
Cow position:
               
chr18:31557229-31556980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 104
               

               
Conread position:
               
163-374
               

               
Cow position:
               
chr18:47565761-47565967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
163-396
               

               
Cow position:
               
chr18:38937756-38937990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 100
               

               
Conread position:
               
163-397
               

               
Cow position:
               
chr18:52251923-52251681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 101
               

               
Conread position:
               
163-398
               

               
Cow position:
               
chr18:52413899-52414140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
166-398
               

               
Cow position:
               
chr18:27388523-27388769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
168-321
               

               
Cow position:
               
chr18:46072402-46072558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
33, 97
               

               
Conread position:
               
168-373
               

               
Cow position:
               
chr18:11754072-11754278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
168-383
               

               
Cow position:
               
chr18:49324495-49324279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 91
               

               
Conread position:
               
168-394
               

               
Cow position:
               
chr18:24719252-24719477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
31, 93
               

               
Conread position:
               
168-395
               

               
Cow position:
               
chr18:56183564-56183331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
30, 72
               

               
Conread position:
               
168-396
               

               
Cow position:
               
chr18:6818725-6818497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
168-397
               

               
Cow position:
               
chr18:45558086-45558314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
168-399
               

               
Cow position:
               
chr18:44908992-44909225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
168-401
               

               
Cow position:
               
chr18:47824829-47824599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
169-361
               

               
Cow position:
               
chr18:40047558-40047368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 87
               

               
Conread position:
               
169-366
               

               
Cow position:
               
chr18:48113024-48112825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
171-374
               

               
Cow position:
               
chr18:51192798-51192596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
174-397
               

               
Cow position:
               
chr18:4851532-4851314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
176-401
               

               
Cow position:
               
chr18:14172260-14172034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
177-391
               

               
Cow position:
               
chr18:42427568-42427781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
180-399
               

               
Cow position:
               
chr18:50632491-50632267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
183-400
               

               
Cow position:
               
chr18:44917711-44917929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
184-374
               

               
Cow position:
               
chr18:31945-32143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
184-398
               

               
Cow position:
               
chr18:21969848-21969629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
187-398
               

               
Cow position:
               
chr18:35827414-35827206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
10, 5
               

               
Conread position:
               
193-311
               

               
Cow position:
               
chr18:45390819-45390696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
195-397
               

               
Cow position:
               
chr18:19809711-19809512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
16, 12
               

               
Conread position:
               
195-398
               

               
Cow position:
               
chr18:45185843-45186048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
197-366
               

               
Cow position:
               
chr18:28322626-28322794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
198-393
               

               
Cow position:
               
chr18:41702807-41703001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
198-402
               

               
Cow position:
               
chr18:19613882-19614086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
205-394
               

               
Cow position:
               
chr18:35857942-35857752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
104, 50
               

               
Conread position:
               
209-401
               

               
Cow position:
               
chr18:49440828-49441018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
95, 12
               

               
Conread position:
               
211-396
               

               
Cow position:
               
chr18:21528634-21528825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 52
               

               
Conread position:
               
212-400
               

               
Cow position:
               
chr18:9818757-9818937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
213-401
               

               
Cow position:
               
chr18:10051736-10051928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
6, 46
               

               
Conread position:
               
214-367
               

               
Cow position:
               
chr18:43014873-43014728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
214-379
               

               
Cow position:
               
chr18:50263935-50263774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
214-392
               

               
Cow position:
               
chr18:4485594-4485762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
92, 14
               

               
Conread position:
               
214-401
               

               
Cow position:
               
chr18:50004715-50004531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
215-366
               

               
Cow position:
               
chr18:43125078-43125218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
93, 45
               

               
Conread position:
               
215-391
               

               
Cow position:
               
chr18:47802098-47801928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 11
               

               
Conread position:
               
215-396
               

               
Cow position:
               
chr18:641332-641145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
215-397
               

               
Cow position:
               
chr18:27637484-27637666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
215-398
               

               
Cow position:
               
chr18:41724826-41724636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
215-398
               

               
Cow position:
               
chr18:49603051-49602870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
93, 40
               

               
Conread position:
               
215-399
               

               
Cow position:
               
chr18:25598240-25598056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
91, 40
               

               
Conread position:
               
215-402
               

               
Cow position:
               
chr18:2793979-2793800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
152, 40
               

               
Conread position:
               
215-402
               

               
Cow position:
               
chr18:17195353-17195163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
95, 38
               

               
Conread position:
               
215-402
               

               
Cow position:
               
chr18:35837631-35837450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
147, 43
               

               
Conread position:
               
215-406
               

               
Cow position:
               
chr18:4530551-4530740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
88, 45
               

               
Conread position:
               
216-393
               

               
Cow position:
               
chr18:32290705-32290869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
217-379
               

               
Cow position:
               
chr18:15809810-15809655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
217-379
               

               
Cow position:
               
chr18:49127023-49126868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
217-398
               

               
Cow position:
               
chr18:34444743-34444565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
218-352
               

               
Cow position:
               
chr18:81967-82098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
218-395
               

               
Cow position:
               
chr18:19831576-19831745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
220-366
               

               
Cow position:
               
chr18:9596180-9596318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
220-396
               

               
Cow position:
               
chr18:18844014-18844181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
220-401
               

               
Cow position:
               
chr18:39710104-39710285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
220-401
               

               
Cow position:
               
chr18:48407736-48407907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
221-374
               

               
Cow position:
               
chr18:50018734-50018590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
221-396
               

               
Cow position:
               
chr18:51413588-51413751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
6, 40
               

               
Conread position:
               
222-397
               

               
Cow position:
               
chr18:16137282-16137106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
222-398
               

               
Cow position:
               
chr18:1549550-1549368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
226-374
               

               
Cow position:
               
chr18:23648925-23649078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
226-374
               

               
Cow position:
               
chr18:38228410-38228552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
134, 29
               

               
Conread position:
               
226-374
               

               
Cow position:
               
chr18:47872044-47872185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
134, 19
               

               
Conread position:
               
226-380
               

               
Cow position:
               
chr18:47096432-47096582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
150, 32
               

               
Conread position:
               
226-392
               

               
Cow position:
               
chr18:44206081-44205928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
226-402
               

               
Cow position:
               
chr18:33492363-33492525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
226-402
               

               
Cow position:
               
chr18:56463727-56463550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
226-407
               

               
Cow position:
               
chr18:2773389-2773199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
227-372
               

               
Cow position:
               
chr18:15351726-15351578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 28
               

               
Conread position:
               
227-407
               

               
Cow position:
               
chr18:2776891-2776702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
228-402
               

               
Cow position:
               
chr18:43400710-43400542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
148, 27
               

               
Conread position:
               
229-392
               

               
Cow position:
               
chr18:22045406-22045245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 5
               

               
Conread position:
               
229-397
               

               
Cow position:
               
chr18:36501071-36500905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 5
               

               
Conread position:
               
229-398
               

               
Cow position:
               
chr18:8208418-8208251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
75, 7
               

               
Conread position:
               
232-373
               

               
Cow position:
               
chr18:4804258-4804119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
234-380
               

               
Cow position:
               
chr18:55722512-55722657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
235-354
               

               
Cow position:
               
chr18:50384122-50384246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
235-374
               

               
Cow position:
               
chr18:21143951-21143816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
133, 20
               

               
Conread position:
               
235-374
               

               
Cow position:
               
chr18:44548734-44548594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
236-355
               

               
Cow position:
               
chr18:56157214-56157096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
237-379
               

               
Cow position:
               
chr18:10758041-10757901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
237-392
               

               
Cow position:
               
chr18:4907161-4907310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
239-397
               

               
Cow position:
               
chr18:34490297-34490452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
240-407
               

               
Cow position:
               
chr18:43056908-43057074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
242-398
               

               
Cow position:
               
chr18:42967131-42967280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
118, 18
               

               
Conread position:
               
259-395
               

               
Cow position:
               
chr18:18520769-18520632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 121
               

               
Conread position:
               
259-398
               

               
Cow position:
               
chr18:15340462-15340322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 112
               

               
Conread position:
               
259-401
               

               
Cow position:
               
chr18:10117772-10117911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-402
               

               
Cow position:
               
chr18:17756913-17756765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 125
               

               
Conread position:
               
259-404
               

               
Cow position:
               
chr18:25139592-25139739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 122
               

               
Conread position:
               
260-374
               

               
Cow position:
               
chr18:22180744-22180629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
100, 55
               

               
Conread position:
               
261-375
               

               
Cow position:
               
chr18:26647593-26647713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               
Show alignments to all cow chromosomes.