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Cow genome map

           
Conread name:
           
rfty509b_i5.y2
        

               
Conread position:
               
1-202
               

               
Cow position:
               
chr9:22227844-22228057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr9:23028036-23027816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr9:6225210-6225459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr9:41789520-41789240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr9:22114391-22114683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr9:9823278-9823572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
112, 36
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr9:3220365-3220060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
93, 34
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr9:6880012-6879703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr9:5509966-5509649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr9:38344136-38343812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
36, 179
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr9:46316546-46316858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr9:32371518-32371833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr9:5218937-5219255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr9:43871214-43870887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
39, 275
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr9:55084055-55084392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr9:9624786-9625103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 30
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr9:54716379-54716694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr9:7634509-7634177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr9:42445740-42446076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr9:55890051-55889720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr9:55074893-55075223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr9:5246091-5245754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr9:8534441-8534798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr9:59386535-59386869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr9:1950161-1949816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr9:5594742-5594399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr9:8563083-8562719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr9:50139523-50139182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr9:11068227-11068586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 173
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr9:28948094-28947755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr9:31078840-31079186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr9:64559645-64559994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
68, 36
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr9:9199542-9199892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr9:10308765-10309110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr9:6933830-6934194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
35, 182
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:1729434-1729800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr9:36445864-36445494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr9:54528757-54528389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr9:15215439-15215830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr9:30402178-30402569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr9:34957809-34958192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
51, 36
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr9:20416267-20416656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr9:31347196-31346804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 37
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr9:34901873-34902242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
74, 164
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr9:23388436-23388826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
48, 36
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr9:29184891-29185295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr9:3070181-3070573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
63, 36
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr9:8724038-8723639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
55, 38
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr9:42498071-42497672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr9:20900888-20901277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr9:7410024-7409617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 36
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr9:16300329-16300734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr9:20942368-20942779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr9:45285289-45285699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr9:59013093-59013498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
71, 38
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr9:33119640-33120051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr9:37017126-37016736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr9:17740702-17741105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr9:17310320-17310723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr9:33940849-33940429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr9:6192217-6192633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr9:5327496-5327091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr9:13205328-13205743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 268
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr9:28773359-28772970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr9:29006802-29006388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr9:32676928-32676506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr9:35167410-35166994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr9:61022853-61022448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
35, 172
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr9:61846908-61847286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr9:20091281-20090887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr9:5501093-5500691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr9:32306994-32307407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
51, 36
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr9:56453574-56453173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr9:6952332-6951938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
96, 36
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr9:9516528-9516922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr9:22151845-22152259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr9:24887442-24887031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr9:28747280-28747692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr9:34287036-34286624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr9:34689370-34689784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
66, 26
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr9:11299454-11299854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr9:47869249-47868849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr9:49764898-49764470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr9:58979643-58979229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr9:9402943-9403353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
110, 169
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr9:9595712-9596126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 37
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr9:13670878-13670460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr9:18252681-18253098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr9:20579378-20579764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr9:26278931-26279349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr9:32732444-32732841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr9:33598223-33597797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr9:50977004-50977432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr9:51620678-51620268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 34
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr9:54681744-54681340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr9:5756761-5757158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr9:15805679-15806110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr9:8998597-8998173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
60, 284
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr9:22318580-22318181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr9:34697053-34697480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr9:5433877-5433465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 36
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr9:33100898-33101284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr9:37069327-37069746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr9:50606711-50607109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr9:52484675-52485095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr9:22433700-22434107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr9:49710085-49709789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr9:5319870-5319543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr9:5763389-5763713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr9:50080805-50081136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr9:23430901-23431243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
52, 37
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr9:21888410-21888071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr9:18342964-18342628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
2-347
               

               
Cow position:
               
chr9:7363268-7362902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
2-352
               

               
Cow position:
               
chr9:9461414-9461783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr9:56011738-56011370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
2-364
               

               
Cow position:
               
chr9:9552328-9551949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr9:41679976-41679617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
2-374
               

               
Cow position:
               
chr9:10011041-10010656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
2-374
               

               
Cow position:
               
chr9:55287650-55288045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
2-374
               

               
Cow position:
               
chr9:58451856-58452226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
109, 35
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr9:5836403-5835990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr9:33823339-33822949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr9:43757764-43757373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
109, 35
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr9:54677463-54677085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr9:10144231-10144661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr9:47906048-47906463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 35
               

               
Conread position:
               
2-398
               

               
Cow position:
               
chr9:55795999-55795582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
2-402
               

               
Cow position:
               
chr9:48118461-48118868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr9:8338270-8337925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chr9:8288857-8288515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr9:6840251-6839846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr9:13169428-13169837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
3-398
               

               
Cow position:
               
chr9:9443357-9443778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr9:1520491-1520842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
7-311
               

               
Cow position:
               
chr9:45756596-45756275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
7-314
               

               
Cow position:
               
chr9:62657028-62656712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
7-320
               

               
Cow position:
               
chr9:26434831-26435156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
7-323
               

               
Cow position:
               
chr9:11319396-11319735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr9:64091924-64091562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
7-354
               

               
Cow position:
               
chr9:41513855-41513504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
7-366
               

               
Cow position:
               
chr9:22638336-22637954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
7-371
               

               
Cow position:
               
chr9:44710061-44709679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
7-395
               

               
Cow position:
               
chr9:36490659-36491080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr9:648012-647599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
7-397
               

               
Cow position:
               
chr9:17871871-17872287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
7-398
               

               
Cow position:
               
chr9:8636888-8636501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
8-307
               

               
Cow position:
               
chr9:24873057-24872752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 59
               

               
Conread position:
               
8-361
               

               
Cow position:
               
chr9:20321881-20322229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
86, 29
               

               
Conread position:
               
8-394
               

               
Cow position:
               
chr9:28726488-28726904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
8-394
               

               
Cow position:
               
chr9:35027938-35028339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
8-401
               

               
Cow position:
               
chr9:52131253-52130827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
9-341
               

               
Cow position:
               
chr9:48106886-48107231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 159
               

               
Conread position:
               
9-361
               

               
Cow position:
               
chr9:56032094-56032457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
9-401
               

               
Cow position:
               
chr9:34374695-34375106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
9-402
               

               
Cow position:
               
chr9:45141371-45141776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
11-314
               

               
Cow position:
               
chr9:4580188-4580494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
12-395
               

               
Cow position:
               
chr9:63784692-63785085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
16-366
               

               
Cow position:
               
chr9:53762928-53762554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
16-398
               

               
Cow position:
               
chr9:30477557-30477948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
22-367
               

               
Cow position:
               
chr9:31557514-31557876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 133
               

               
Conread position:
               
23-301
               

               
Cow position:
               
chr9:60027406-60027119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
23-318
               

               
Cow position:
               
chr9:6686089-6685805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
23-321
               

               
Cow position:
               
chr9:28354738-28354418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr9:1973162-1972792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
24-374
               

               
Cow position:
               
chr9:26057219-26057585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
13, 175
               

               
Conread position:
               
27-312
               

               
Cow position:
               
chr9:43444011-43443714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
27-374
               

               
Cow position:
               
chr9:10650093-10650444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
27, 141
               

               
Conread position:
               
28-401
               

               
Cow position:
               
chr9:11123277-11123664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
36-379
               

               
Cow position:
               
chr9:23970714-23971053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
165, 27
               

               
Conread position:
               
48-399
               

               
Cow position:
               
chr9:31216273-31215902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
48-402
               

               
Cow position:
               
chr9:9312040-9311676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
7, 218
               

               
Conread position:
               
50-396
               

               
Cow position:
               
chr9:50202752-50202380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
50-402
               

               
Cow position:
               
chr9:12281154-12280790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
15, 222
               

               
Conread position:
               
52-366
               

               
Cow position:
               
chr9:12225799-12226130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 123
               

               
Conread position:
               
57-379
               

               
Cow position:
               
chr9:60394873-60395209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 107
               

               
Conread position:
               
58-398
               

               
Cow position:
               
chr9:3378921-3378586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 203
               

               
Conread position:
               
64-360
               

               
Cow position:
               
chr9:12910232-12910539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 101
               

               
Conread position:
               
65-322
               

               
Cow position:
               
chr9:11313341-11313614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
66-303
               

               
Cow position:
               
chr9:49417155-49416907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
66-347
               

               
Cow position:
               
chr9:18216936-18217225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
45, 97
               

               
Conread position:
               
66-359
               

               
Cow position:
               
chr9:54493292-54493000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
110, 42
               

               
Conread position:
               
66-361
               

               
Cow position:
               
chr9:6397613-6397926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
66-361
               

               
Cow position:
               
chr9:20755607-20755899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
66-366
               

               
Cow position:
               
chr9:30124088-30123785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
45, 75
               

               
Conread position:
               
66-366
               

               
Cow position:
               
chr9:38846185-38846486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
66-374
               

               
Cow position:
               
chr9:8920166-8919848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
28, 181
               

               
Conread position:
               
66-374
               

               
Cow position:
               
chr9:20848099-20847790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
45, 97
               

               
Conread position:
               
66-374
               

               
Cow position:
               
chr9:25583988-25583675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
66-374
               

               
Cow position:
               
chr9:52578369-52578694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 96
               

               
Conread position:
               
66-379
               

               
Cow position:
               
chr9:5263668-5263344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
43, 138
               

               
Conread position:
               
66-384
               

               
Cow position:
               
chr9:19903233-19902924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
66-394
               

               
Cow position:
               
chr9:20406802-20406483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
66-394
               

               
Cow position:
               
chr9:25557133-25556811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
94, 197
               

               
Conread position:
               
66-394
               

               
Cow position:
               
chr9:55256383-55256721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
44, 97
               

               
Conread position:
               
66-395
               

               
Cow position:
               
chr9:47445859-47446192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
66-396
               

               
Cow position:
               
chr9:51720734-51721067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
26, 102
               

               
Conread position:
               
66-398
               

               
Cow position:
               
chr9:4341002-4341332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 93
               

               
Conread position:
               
66-400
               

               
Cow position:
               
chr9:26477384-26477032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
66-400
               

               
Cow position:
               
chr9:56065716-56065382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
24, 99
               

               
Conread position:
               
66-401
               

               
Cow position:
               
chr9:8901056-8901410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
66-405
               

               
Cow position:
               
chr9:11168898-11168561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
67-306
               

               
Cow position:
               
chr9:55321804-55321554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 203
               

               
Conread position:
               
68-305
               

               
Cow position:
               
chr9:49292980-49293225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 94
               

               
Conread position:
               
68-401
               

               
Cow position:
               
chr9:32019165-32019506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
69-298
               

               
Cow position:
               
chr9:19493298-19493541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
69-347
               

               
Cow position:
               
chr9:9654147-9654432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 125
               

               
Conread position:
               
69-374
               

               
Cow position:
               
chr9:9815580-9815257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
69-379
               

               
Cow position:
               
chr9:38793178-38792855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 134
               

               
Conread position:
               
69-395
               

               
Cow position:
               
chr9:19067942-19067589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
45, 87
               

               
Conread position:
               
69-397
               

               
Cow position:
               
chr9:48628192-48627848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 200
               

               
Conread position:
               
69-399
               

               
Cow position:
               
chr9:17799794-17799455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
40, 207
               

               
Conread position:
               
69-399
               

               
Cow position:
               
chr9:33218787-33219137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
42, 173
               

               
Conread position:
               
69-402
               

               
Cow position:
               
chr9:25804999-25804646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
70-323
               

               
Cow position:
               
chr9:44467189-44467441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 82
               

               
Conread position:
               
70-325
               

               
Cow position:
               
chr9:4267820-4268087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
70-380
               

               
Cow position:
               
chr9:19034504-19034191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
70-400
               

               
Cow position:
               
chr9:41728420-41728082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
71-320
               

               
Cow position:
               
chr9:17518326-17518585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 83
               

               
Conread position:
               
71-323
               

               
Cow position:
               
chr9:37678050-37677793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
71-374
               

               
Cow position:
               
chr9:46981073-46981378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
71-392
               

               
Cow position:
               
chr9:27345448-27345759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
232, 111
               

               
Conread position:
               
71-398
               

               
Cow position:
               
chr9:40215406-40215071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
73-359
               

               
Cow position:
               
chr9:61739077-61738783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
35, 7
               

               
Conread position:
               
73-366
               

               
Cow position:
               
chr9:41394496-41394795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
73-393
               

               
Cow position:
               
chr9:11303917-11304261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
74-395
               

               
Cow position:
               
chr9:39011317-39011640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
81-375
               

               
Cow position:
               
chr9:5456035-5456329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
85-399
               

               
Cow position:
               
chr9:9723744-9724062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
28, 69
               

               
Conread position:
               
86-297
               

               
Cow position:
               
chr9:51557351-51557559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 74
               

               
Conread position:
               
89-404
               

               
Cow position:
               
chr9:4630235-4629922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
90-325
               

               
Cow position:
               
chr9:55532944-55532711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
93-401
               

               
Cow position:
               
chr9:45728908-45728598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 28
               

               
Conread position:
               
95-311
               

               
Cow position:
               
chr9:3343878-3343660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
95-366
               

               
Cow position:
               
chr9:46664950-46664679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
97-398
               

               
Cow position:
               
chr9:34284080-34283779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
100-374
               

               
Cow position:
               
chr9:21080689-21080417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
107-316
               

               
Cow position:
               
chr9:22461624-22461825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
60, 50
               

               
Conread position:
               
107-318
               

               
Cow position:
               
chr9:23788553-23788343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
107-363
               

               
Cow position:
               
chr9:26310625-26310366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
107-398
               

               
Cow position:
               
chr9:38624508-38624807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
107-402
               

               
Cow position:
               
chr9:42062220-42061910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
109-374
               

               
Cow position:
               
chr9:64106022-64105747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
7, 158
               

               
Conread position:
               
109-397
               

               
Cow position:
               
chr9:33697144-33696868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
56, 48
               

               
Conread position:
               
110-361
               

               
Cow position:
               
chr9:55438311-55438572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 161
               

               
Conread position:
               
111-361
               

               
Cow position:
               
chr9:18215804-18216052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
111-393
               

               
Cow position:
               
chr9:40005588-40005306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
90, 150
               

               
Conread position:
               
111-399
               

               
Cow position:
               
chr9:60081018-60080713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
48, 85
               

               
Conread position:
               
112-306
               

               
Cow position:
               
chr9:10819721-10819911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
112-314
               

               
Cow position:
               
chr9:3774272-3774073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
87, 50
               

               
Conread position:
               
112-322
               

               
Cow position:
               
chr9:38645231-38645444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
112-325
               

               
Cow position:
               
chr9:35105678-35105895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
112-341
               

               
Cow position:
               
chr9:6596123-6596345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
112-347
               

               
Cow position:
               
chr9:17411080-17411317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
51, 63
               

               
Conread position:
               
112-361
               

               
Cow position:
               
chr9:22443516-22443763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
85, 58
               

               
Conread position:
               
112-366
               

               
Cow position:
               
chr9:3353462-3353222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
112-366
               

               
Cow position:
               
chr9:13743821-13744079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
112-374
               

               
Cow position:
               
chr9:3186239-3185973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 46
               

               
Conread position:
               
112-374
               

               
Cow position:
               
chr9:9358924-9358662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
32, 40
               

               
Conread position:
               
112-374
               

               
Cow position:
               
chr9:32669836-32670102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
112-374
               

               
Cow position:
               
chr9:41283125-41282856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
112-376
               

               
Cow position:
               
chr9:29339213-29339470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr9:44396770-44396499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
112-380
               

               
Cow position:
               
chr9:51566383-51566659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
112-392
               

               
Cow position:
               
chr9:23955872-23956147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
86, 51
               

               
Conread position:
               
112-392
               

               
Cow position:
               
chr9:52267645-52267932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
112-396
               

               
Cow position:
               
chr9:4262981-4263263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
44, 95
               

               
Conread position:
               
112-396
               

               
Cow position:
               
chr9:31359712-31359430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 11
               

               
Conread position:
               
112-397
               

               
Cow position:
               
chr9:33114458-33114164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
112-401
               

               
Cow position:
               
chr9:1877896-1878177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
112-402
               

               
Cow position:
               
chr9:27279420-27279122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
112-402
               

               
Cow position:
               
chr9:33584571-33584865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
112-402
               

               
Cow position:
               
chr9:34410284-34410573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
112-402
               

               
Cow position:
               
chr9:38941320-38941617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
86, 45
               

               
Conread position:
               
112-402
               

               
Cow position:
               
chr9:42264318-42264041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
112-414
               

               
Cow position:
               
chr9:1867561-1867272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
113-395
               

               
Cow position:
               
chr9:50310663-50310936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
114-319
               

               
Cow position:
               
chr9:52598614-52598818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
115-318
               

               
Cow position:
               
chr9:32981963-32982169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
84, 148
               

               
Conread position:
               
116-347
               

               
Cow position:
               
chr9:45171111-45171349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 148
               

               
Conread position:
               
116-398
               

               
Cow position:
               
chr9:3573576-3573288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 37
               

               
Conread position:
               
120-292
               

               
Cow position:
               
chr9:40776901-40776729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
120-314
               

               
Cow position:
               
chr9:52839783-52839971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
120-332
               

               
Cow position:
               
chr9:19758812-19758611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
122-320
               

               
Cow position:
               
chr9:23797337-23797139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 7
               

               
Conread position:
               
122-325
               

               
Cow position:
               
chr9:64064255-64064466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 124
               

               
Conread position:
               
122-361
               

               
Cow position:
               
chr9:52754755-52754992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
123-372
               

               
Cow position:
               
chr9:35832515-35832768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
123-379
               

               
Cow position:
               
chr9:16217074-16216818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
124-396
               

               
Cow position:
               
chr9:37199223-37198952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
124-398
               

               
Cow position:
               
chr9:6954147-6954435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
125-326
               

               
Cow position:
               
chr9:41781752-41781552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr9:43159840-43159561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 69
               

               
Conread position:
               
126-406
               

               
Cow position:
               
chr9:17840577-17840864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
29, 140
               

               
Conread position:
               
128-366
               

               
Cow position:
               
chr9:25400101-25400332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
128-398
               

               
Cow position:
               
chr9:34278959-34279235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 99
               

               
Conread position:
               
130-312
               

               
Cow position:
               
chr9:42478388-42478572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
130-344
               

               
Cow position:
               
chr9:5649879-5650092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
130-361
               

               
Cow position:
               
chr9:33838217-33838448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
130-361
               

               
Cow position:
               
chr9:46930549-46930319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
130-367
               

               
Cow position:
               
chr9:29819809-29819580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
130-374
               

               
Cow position:
               
chr9:5163890-5164141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
131-374
               

               
Cow position:
               
chr9:26102816-26102576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
132-304
               

               
Cow position:
               
chr9:38289233-38289404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
132-359
               

               
Cow position:
               
chr9:41964640-41964870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 125
               

               
Conread position:
               
132-398
               

               
Cow position:
               
chr9:5342160-5342422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
132-398
               

               
Cow position:
               
chr9:8834038-8834307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
133-324
               

               
Cow position:
               
chr9:43342420-43342229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
136-384
               

               
Cow position:
               
chr9:24652499-24652233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
136-398
               

               
Cow position:
               
chr9:5110947-5110680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
138-361
               

               
Cow position:
               
chr9:33542142-33541912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
139-402
               

               
Cow position:
               
chr9:9686329-9686598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
143-379
               

               
Cow position:
               
chr9:54986074-54986321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
143-402
               

               
Cow position:
               
chr9:41785292-41785041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
146-397
               

               
Cow position:
               
chr9:63361637-63361886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 118
               

               
Conread position:
               
147-398
               

               
Cow position:
               
chr9:1371005-1370754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
154-339
               

               
Cow position:
               
chr9:49545301-49545483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
157-374
               

               
Cow position:
               
chr9:57131564-57131342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 105
               

               
Conread position:
               
159-368
               

               
Cow position:
               
chr9:52257999-52258213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
159-374
               

               
Cow position:
               
chr9:39758583-39758374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
160-356
               

               
Cow position:
               
chr9:56827547-56827338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 112
               

               
Conread position:
               
160-399
               

               
Cow position:
               
chr9:7543202-7543434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
162-393
               

               
Cow position:
               
chr9:48017045-48016818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 101
               

               
Conread position:
               
162-394
               

               
Cow position:
               
chr9:12337966-12337728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 105
               

               
Conread position:
               
162-398
               

               
Cow position:
               
chr9:9460046-9459813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 98
               

               
Conread position:
               
163-379
               

               
Cow position:
               
chr9:2037492-2037276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
163-392
               

               
Cow position:
               
chr9:44584654-44584431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
163-398
               

               
Cow position:
               
chr9:55494924-55495166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
164-398
               

               
Cow position:
               
chr9:42586495-42586729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
165-357
               

               
Cow position:
               
chr9:58368937-58369129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
165-402
               

               
Cow position:
               
chr9:52763700-52763933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
166-360
               

               
Cow position:
               
chr9:64629306-64629502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
168-321
               

               
Cow position:
               
chr9:34888240-34888393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
8, 42
               

               
Conread position:
               
168-364
               

               
Cow position:
               
chr9:55529852-55529660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
168-366
               

               
Cow position:
               
chr9:47214488-47214695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
168-397
               

               
Cow position:
               
chr9:33347433-33347662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 91
               

               
Conread position:
               
168-398
               

               
Cow position:
               
chr9:8992122-8992355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
168-398
               

               
Cow position:
               
chr9:34024756-34024523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
170-366
               

               
Cow position:
               
chr9:50382273-50382463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
170-397
               

               
Cow position:
               
chr9:9243594-9243369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
134, 28
               

               
Conread position:
               
170-398
               

               
Cow position:
               
chr9:14738304-14738070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
170-401
               

               
Cow position:
               
chr9:4241461-4241228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
171-401
               

               
Cow position:
               
chr9:7805907-7806136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
172-402
               

               
Cow position:
               
chr9:25375683-25375913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
174-398
               

               
Cow position:
               
chr9:21292356-21292586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
175-374
               

               
Cow position:
               
chr9:34484645-34484434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
176-366
               

               
Cow position:
               
chr9:44822275-44822467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
22, 86
               

               
Conread position:
               
176-380
               

               
Cow position:
               
chr9:54051823-54051617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
176-395
               

               
Cow position:
               
chr9:12786424-12786649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
177-397
               

               
Cow position:
               
chr9:11030232-11030009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
178-352
               

               
Cow position:
               
chr9:34014202-34014380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
178-379
               

               
Cow position:
               
chr9:39149126-39148922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
179-325
               

               
Cow position:
               
chr9:24243675-24243826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
179-374
               

               
Cow position:
               
chr9:49402697-49402492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
183-374
               

               
Cow position:
               
chr9:11098414-11098607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
191-374
               

               
Cow position:
               
chr9:40603697-40603511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
28, 65
               

               
Conread position:
               
194-398
               

               
Cow position:
               
chr9:35306322-35306525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
195-366
               

               
Cow position:
               
chr9:20637398-20637230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
195-366
               

               
Cow position:
               
chr9:34917162-34917322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
196-354
               

               
Cow position:
               
chr9:6392671-6392520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
196-399
               

               
Cow position:
               
chr9:22803947-22804146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 42
               

               
Conread position:
               
196-400
               

               
Cow position:
               
chr9:36401641-36401838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
198-366
               

               
Cow position:
               
chr9:34707286-34707455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
198-400
               

               
Cow position:
               
chr9:32812203-32812010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
202-398
               

               
Cow position:
               
chr9:8468074-8467880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 57
               

               
Conread position:
               
205-402
               

               
Cow position:
               
chr9:9091090-9091290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
210-396
               

               
Cow position:
               
chr9:11380637-11380819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
94, 45
               

               
Conread position:
               
214-361
               

               
Cow position:
               
chr9:64310770-64310919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
214-374
               

               
Cow position:
               
chr9:34196199-34196038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
93, 40
               

               
Conread position:
               
214-374
               

               
Cow position:
               
chr9:34362743-34362580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
96, 46
               

               
Conread position:
               
214-400
               

               
Cow position:
               
chr9:20828913-20828724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
215-325
               

               
Cow position:
               
chr9:6293599-6293491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
215-364
               

               
Cow position:
               
chr9:12773694-12773551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
215-374
               

               
Cow position:
               
chr9:40984509-40984348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
215-395
               

               
Cow position:
               
chr9:54630314-54630141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
215-396
               

               
Cow position:
               
chr9:48900832-48901014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
215-397
               

               
Cow position:
               
chr9:24079306-24079126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
153, 40
               

               
Conread position:
               
215-398
               

               
Cow position:
               
chr9:32052280-32052100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
215-402
               

               
Cow position:
               
chr9:35466518-35466705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
78, 40
               

               
Conread position:
               
215-402
               

               
Cow position:
               
chr9:41644746-41644936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
217-379
               

               
Cow position:
               
chr9:11873302-11873455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
218-357
               

               
Cow position:
               
chr9:43202335-43202199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
219-354
               

               
Cow position:
               
chr9:37062594-37062460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
219-399
               

               
Cow position:
               
chr9:36457999-36457816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
220-366
               

               
Cow position:
               
chr9:26394350-26394493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
220-374
               

               
Cow position:
               
chr9:1712707-1712864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
220-374
               

               
Cow position:
               
chr9:35932816-35932970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
220-374
               

               
Cow position:
               
chr9:45740143-45740300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
220-374
               

               
Cow position:
               
chr9:52998381-52998534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
220-379
               

               
Cow position:
               
chr9:54598672-54598513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
220-380
               

               
Cow position:
               
chr9:12355785-12355624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
220-392
               

               
Cow position:
               
chr9:28315428-28315254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
220-392
               

               
Cow position:
               
chr9:32773212-32773047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
147, 39
               

               
Conread position:
               
220-393
               

               
Cow position:
               
chr9:19718341-19718505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
139, 35
               

               
Conread position:
               
220-396
               

               
Cow position:
               
chr9:22447295-22447473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
220-396
               

               
Cow position:
               
chr9:62631672-62631841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
220-398
               

               
Cow position:
               
chr9:36628117-36627946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
220-398
               

               
Cow position:
               
chr9:59897593-59897420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
221-398
               

               
Cow position:
               
chr9:32858637-32858820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
223-397
               

               
Cow position:
               
chr9:12269026-12268860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
225-415
               

               
Cow position:
               
chr9:55284351-55284532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 8
               

               
Conread position:
               
226-373
               

               
Cow position:
               
chr9:54086022-54086168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
226-374
               

               
Cow position:
               
chr9:37955178-37955330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
226-376
               

               
Cow position:
               
chr9:5172540-5172689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
226-379
               

               
Cow position:
               
chr9:3198194-3198340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
135, 11
               

               
Conread position:
               
226-393
               

               
Cow position:
               
chr9:8628924-8629083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
128, 29
               

               
Conread position:
               
226-396
               

               
Cow position:
               
chr9:36623932-36624102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
226-397
               

               
Cow position:
               
chr9:53323792-53323964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
82, 7
               

               
Conread position:
               
226-398
               

               
Cow position:
               
chr9:6237499-6237666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
226-398
               

               
Cow position:
               
chr9:8645259-8645083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
226-399
               

               
Cow position:
               
chr9:35295683-35295516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 32
               

               
Conread position:
               
226-399
               

               
Cow position:
               
chr9:61019369-61019542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
82, 32
               

               
Conread position:
               
226-401
               

               
Cow position:
               
chr9:14519387-14519560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
141, 29
               

               
Conread position:
               
227-400
               

               
Cow position:
               
chr9:60741193-60741363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 7
               

               
Conread position:
               
228-400
               

               
Cow position:
               
chr9:52648866-52649024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
229-366
               

               
Cow position:
               
chr9:18163366-18163502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
79, 7
               

               
Conread position:
               
229-374
               

               
Cow position:
               
chr9:28342662-28342811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
76, 5
               

               
Conread position:
               
229-398
               

               
Cow position:
               
chr9:34423610-34423439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
79, 5
               

               
Conread position:
               
229-399
               

               
Cow position:
               
chr9:17027186-17027024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
68, 5
               

               
Conread position:
               
234-379
               

               
Cow position:
               
chr9:19656991-19657134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
234-402
               

               
Cow position:
               
chr9:1917964-1917802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
134, 23
               

               
Conread position:
               
235-398
               

               
Cow position:
               
chr9:26715239-26715075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
235-399
               

               
Cow position:
               
chr9:53390218-53390383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
235-400
               

               
Cow position:
               
chr9:54639835-54639997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
236-343
               

               
Cow position:
               
chr9:11161312-11161207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
236-354
               

               
Cow position:
               
chr9:8967917-8967801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
236-354
               

               
Cow position:
               
chr9:20525388-20525271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
237-374
               

               
Cow position:
               
chr9:30194993-30194855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
237-398
               

               
Cow position:
               
chr9:22360846-22360690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
139, 18
               

               
Conread position:
               
237-401
               

               
Cow position:
               
chr9:57642488-57642334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
239-366
               

               
Cow position:
               
chr9:20712816-20712693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
252-395
               

               
Cow position:
               
chr9:3789984-3789846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
135, 28
               

               
Conread position:
               
259-398
               

               
Cow position:
               
chr9:3946184-3946328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 28
               
Show alignments to all cow chromosomes.