Cow genome map

Conread name: rfty538b_l16.y1

Conread position: 64-215
Cow position: chr10:77606-77455 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 87

Conread position: 377-549
Cow position: chr10:23390192-23390370 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 16

Conread position: 382-549
Cow position: chr10:24447985-24447808 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 26, 10

Conread position: 392-548
Cow position: chr10:6543831-6543669 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 69, 5

Conread position: 396-548
Cow position: chr10:8449608-8449447 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 397-546
Cow position: chr10:44421803-44421957 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 400-545
Cow position: chr10:15817696-15817843 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 401-547
Cow position: chr10:2613464-2613315 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 402-544
Cow position: chr10:30369726-30369873 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 402-545
Cow position: chr10:32080368-32080223 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 403-546
Cow position: chr10:6199115-6198967 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 40

Conread position: 403-546
Cow position: chr10:30360614-30360468 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 403-547
Cow position: chr10:628080-627934 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 403-548
Cow position: chr10:57786434-57786284 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 403-568
Cow position: chr10:38995325-38995155 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 151

Conread position: 404-516
Cow position: chr10:59417141-59417258 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 404-542
Cow position: chr10:33665937-33665794 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 404-543
Cow position: chr10:31027548-31027693 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 404-544
Cow position: chr10:59462228-59462083 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 404-547
Cow position: chr10:37913093-37913241 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 122
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 120

Conread position: 405-539
Cow position: chr10:11248072-11247931 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 405-542
Cow position: chr10:23310935-23311076 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 405-545
Cow position: chr10:5151439-5151295 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 405-546
Cow position: chr10:34655014-34655163 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 405-546
Cow position: chr10:61922050-61922193 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 405-549
Cow position: chr10:31803388-31803536 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 62, 119

Conread position: 405-583
Cow position: chr10:5739185-5739366 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 107

Conread position: 406-536
Cow position: chr10:2704289-2704158 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 406-538
Cow position: chr10:67288383-67288249 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 406-539
Cow position: chr10:51944458-51944318 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 95

Conread position: 406-542
Cow position: chr10:6242421-6242558 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 406-543
Cow position: chr10:29252256-29252118 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 56, 68

Conread position: 406-544
Cow position: chr10:9575956-9576099 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 406-544
Cow position: chr10:20553277-20553133 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 406-544
Cow position: chr10:37415882-37415739 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 406-544
Cow position: chr10:48087981-48087840 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 33

Conread position: 406-544
Cow position: chr10:52695634-52695777 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 406-545
Cow position: chr10:19191846-19191708 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 406-545
Cow position: chr10:24756504-24756360 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 406-545
Cow position: chr10:52278817-52278673 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 113

Conread position: 406-546
Cow position: chr10:973226-973090 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 406-546
Cow position: chr10:21422069-21422209 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 61, 32

Conread position: 406-546
Cow position: chr10:22633533-22633678 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 406-546
Cow position: chr10:23506399-23506540 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 82

Conread position: 406-546
Cow position: chr10:34661233-34661376 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 406-546
Cow position: chr10:37068328-37068465 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 61, 13

Conread position: 406-546
Cow position: chr10:37768395-37768252 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 61, 21

Conread position: 406-546
Cow position: chr10:39228240-39228095 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 406-546
Cow position: chr10:40744205-40744063 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 406-546
Cow position: chr10:45371148-45371004 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 406-547
Cow position: chr10:28841050-28840902 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 406-547
Cow position: chr10:60697536-60697677 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 15

Conread position: 406-549
Cow position: chr10:1978579-1978727 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 406-549
Cow position: chr10:28776443-28776297 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 61, 126

Conread position: 406-549
Cow position: chr10:35778809-35778956 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 62, 40

Conread position: 406-560
Cow position: chr10:49634159-49634000 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 406-563
Cow position: chr10:37426041-37426203 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 407-514
Cow position: chr10:24971235-24971347 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 407-545
Cow position: chr10:6530279-6530134 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 407-545
Cow position: chr10:8093226-8093368 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 47

Conread position: 407-546
Cow position: chr10:77462-77320 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 407-546
Cow position: chr10:6665467-6665605 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 81

Conread position: 407-546
Cow position: chr10:31400807-31400945 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 81

Conread position: 407-546
Cow position: chr10:36947101-36947246 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 407-546
Cow position: chr10:49253454-49253314 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 81

Conread position: 407-546
Cow position: chr10:54819358-54819216 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 407-546
Cow position: chr10:58451283-58451423 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 47

Conread position: 407-549
Cow position: chr10:49947789-49947936 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 407-549
Cow position: chr10:51861987-51862134 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 408-546
Cow position: chr10:21657510-21657374 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 408-546
Cow position: chr10:56828227-56828369 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 127

Conread position: 408-549
Cow position: chr10:6852354-6852211 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 85

Conread position: 409-538
Cow position: chr10:53674915-53674781 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 409-542
Cow position: chr10:2185436-2185301 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 409-543
Cow position: chr10:17149969-17149830 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 409-544
Cow position: chr10:6384620-6384480 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 409-545
Cow position: chr10:42451167-42451303 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 64

Conread position: 409-546
Cow position: chr10:2695051-2694912 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 58, 21

Conread position: 409-546
Cow position: chr10:4151628-4151486 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 409-546
Cow position: chr10:37529176-37529316 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 116

Conread position: 409-547
Cow position: chr10:53405562-53405419 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 409-548
Cow position: chr10:13765075-13765220 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 410-518
Cow position: chr10:49862555-49862445 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 410-528
Cow position: chr10:27178580-27178461 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 45

Conread position: 410-538
Cow position: chr10:22390685-22390552 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 410-543
Cow position: chr10:10634307-10634169 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 410-546
Cow position: chr10:3364093-3364235 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 127

Conread position: 410-546
Cow position: chr10:35731439-35731576 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 128

Conread position: 411-547
Cow position: chr10:61509856-61509998 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 412-545
Cow position: chr10:51696827-51696690 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 414-543
Cow position: chr10:35838961-35838830 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 414-544
Cow position: chr10:23583486-23583619 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 92

Conread position: 414-548
Cow position: chr10:24763567-24763429 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 414-550
Cow position: chr10:69997716-69997857 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 415-545
Cow position: chr10:25822160-25822296 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 415-546
Cow position: chr10:42230876-42230740 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 416-546
Cow position: chr10:48573597-48573732 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 417-548
Cow position: chr10:53973923-53973791 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 78

Conread position: 417-550
Cow position: chr10:57142134-57142272 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 419-544
Cow position: chr10:46886233-46886106 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 434-548
Cow position: chr10:54469329-54469449 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 0

Show alignments to all cow chromosomes.