Cow genome map

Conread name: rfty538b_l16.y1

Conread position: 399-544
Cow position: chr16:4626268-4626417 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 18

Conread position: 400-549
Cow position: chr16:21761847-21762001 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 401-546
Cow position: chr16:22919589-22919440 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 131

Conread position: 403-519
Cow position: chr16:16025556-16025435 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 403-542
Cow position: chr16:17289067-17288923 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 403-543
Cow position: chr16:8738185-8738040 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 403-545
Cow position: chr16:22207197-22207051 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 23

Conread position: 403-546
Cow position: chr16:8461962-8462104 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 95

Conread position: 403-546
Cow position: chr16:14242488-14242343 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 403-546
Cow position: chr16:54226480-54226625 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 403-548
Cow position: chr16:33646135-33645985 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 403-551
Cow position: chr16:12320341-12320188 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 127
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 64, 0

Conread position: 404-539
Cow position: chr16:53451824-53451684 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 404-545
Cow position: chr16:41578345-41578200 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 63, 137

Conread position: 404-546
Cow position: chr16:7076031-7075887 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 404-546
Cow position: chr16:21040147-21039999 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 404-546
Cow position: chr16:33235045-33235189 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 404-546
Cow position: chr16:47820686-47820540 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 125
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 60, 0

Conread position: 404-546
Cow position: chr16:49126068-49126215 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 107

Conread position: 404-548
Cow position: chr16:17945640-17945490 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 404-549
Cow position: chr16:12133979-12133829 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 405-532
Cow position: chr16:19003415-19003547 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 405-545
Cow position: chr16:39616840-39616698 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 134

Conread position: 405-545
Cow position: chr16:48095647-48095793 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 405-545
Cow position: chr16:54579284-54579140 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 405-546
Cow position: chr16:8239751-8239893 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 136

Conread position: 405-546
Cow position: chr16:17291904-17292050 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 405-546
Cow position: chr16:20824595-20824449 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 405-546
Cow position: chr16:33704923-33704780 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 119

Conread position: 405-546
Cow position: chr16:45678096-45677950 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 405-549
Cow position: chr16:30036344-30036205 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 406-540
Cow position: chr16:7505201-7505067 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 80, 59

Conread position: 406-541
Cow position: chr16:29527945-29527806 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 22

Conread position: 406-543
Cow position: chr16:4856985-4857124 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 86

Conread position: 406-543
Cow position: chr16:19644005-19643863 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 20

Conread position: 406-543
Cow position: chr16:34220303-34220161 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 406-544
Cow position: chr16:40514365-40514508 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 406-545
Cow position: chr16:40562348-40562205 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 15

Conread position: 406-546
Cow position: chr16:5364018-5363872 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 406-546
Cow position: chr16:7723818-7723673 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 406-546
Cow position: chr16:10504943-10504800 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 128

Conread position: 406-546
Cow position: chr16:13689783-13689638 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 406-546
Cow position: chr16:25839737-25839592 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 406-546
Cow position: chr16:31149493-31149350 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 15

Conread position: 406-546
Cow position: chr16:32807176-32807319 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 123
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 406-546
Cow position: chr16:34753843-34753988 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 406-546
Cow position: chr16:40700620-40700758 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 406-546
Cow position: chr16:42977583-42977437 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 20

Conread position: 406-546
Cow position: chr16:45122152-45122007 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 406-546
Cow position: chr16:47964702-47964847 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 406-546
Cow position: chr16:48340577-48340722 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 406-546
Cow position: chr16:51501046-51500904 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 406-547
Cow position: chr16:20069949-20069803 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 406-547
Cow position: chr16:31078974-31079120 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 406-548
Cow position: chr16:12010212-12010064 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 406-548
Cow position: chr16:48494437-48494585 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 123
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 406-548
Cow position: chr16:56243770-56243915 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 406-549
Cow position: chr16:11615128-11615276 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 407-540
Cow position: chr16:51578325-51578459 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 49

Conread position: 407-545
Cow position: chr16:20025557-20025417 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 407-546
Cow position: chr16:15945138-15945284 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 407-546
Cow position: chr16:19052752-19052607 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 407-546
Cow position: chr16:42241163-42241021 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 98

Conread position: 407-546
Cow position: chr16:54679781-54679641 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 86

Conread position: 407-548
Cow position: chr16:8530766-8530914 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 408-541
Cow position: chr16:44584324-44584458 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 78

Conread position: 408-545
Cow position: chr16:5257111-5256969 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 408-546
Cow position: chr16:21370075-21370215 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 408-547
Cow position: chr16:39474038-39474181 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 13

Conread position: 409-540
Cow position: chr16:46430039-46430171 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 409-542
Cow position: chr16:3114653-3114515 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 409-544
Cow position: chr16:33054367-33054507 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 409-545
Cow position: chr16:9553171-9553032 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 409-545
Cow position: chr16:32781477-32781339 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 409-546
Cow position: chr16:11134867-11135009 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 409-546
Cow position: chr16:24855654-24855515 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 20, 95

Conread position: 409-546
Cow position: chr16:32893742-32893600 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 410-544
Cow position: chr16:31561868-31561729 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 410-546
Cow position: chr16:14106750-14106614 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 44

Conread position: 410-546
Cow position: chr16:39172035-39172175 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 410-546
Cow position: chr16:55233794-55233656 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 79

Conread position: 410-548
Cow position: chr16:30305701-30305842 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 410-548
Cow position: chr16:51598500-51598642 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 57, 100

Conread position: 410-549
Cow position: chr16:42345500-42345639 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 82

Conread position: 411-545
Cow position: chr16:7626271-7626132 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 411-545
Cow position: chr16:27728372-27728232 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 411-546
Cow position: chr16:50667403-50667263 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 414-544
Cow position: chr16:7980898-7980767 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 86

Conread position: 414-546
Cow position: chr16:33226430-33226566 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 415-545
Cow position: chr16:16571021-16570888 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 78

Conread position: 416-546
Cow position: chr16:16597664-16597530 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 45, 125

Conread position: 416-546
Cow position: chr16:26649522-26649657 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 417-545
Cow position: chr16:48398148-48398281 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 78

Conread position: 419-549
Cow position: chr16:17460271-17460136 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 8

Conread position: 427-548
Cow position: chr16:45139762-45139641 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 29

Show alignments to all cow chromosomes.