Cow genome map


           Conread name:
           rfty538b_l16.y1
        

               Conread position:
               388-548
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               392-544
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               75, 5
               

               Conread position:
               396-545
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               397-543
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               86, 30
               

               Conread position:
               398-548
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               400-544
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               67, 26
               

               Conread position:
               400-545
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               85, 73
               

               Conread position:
               401-541
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               401-544
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               401-544
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               402-545
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               59, 86
               

               Conread position:
               403-546
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               403-546
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               404-535
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               404-541
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 139
               

               Conread position:
               404-546
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               63, 22
               

               Conread position:
               404-546
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               404-548
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               69, 27
               

               Conread position:
               405-520
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               405-544
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               405-545
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               405-546
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               405-547
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               405-548
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               406-532
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               61, 15
               

               Conread position:
               406-542
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               406-542
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-542
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               55, 86
               

               Conread position:
               406-543
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-544
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               61, 21
               

               Conread position:
               406-544
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-545
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               406-545
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               61, 80
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               61, 50
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               61, 41
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               406-547
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               406-547
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-547
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               407-544
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               407-544
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 11
               

               Conread position:
               407-545
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               407-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               407-546
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               408-545
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               78, 114
               

               Conread position:
               408-545
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               31, 84
               

               Conread position:
               408-546
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               408-546
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               408-548
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               409-537
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               58, 114
               

               Conread position:
               409-541
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               409-545
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               409-546
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               409-546
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               409-548
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               57, 117
               

               Conread position:
               409-549
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               58, 129
               

               Conread position:
               410-547
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               410-549
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               411-545
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               412-542
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               413-545
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 117
               

               Conread position:
               415-543
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               415-546
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               415-546
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               415-547
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               415-547
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               417-546
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               417-546
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               418-546
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               418-550
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               419-544
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 69
               

               Conread position:
               419-545
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               420-546
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               421-564
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               46, 73
               

               Conread position:
               426-546
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               41, 20
               
Show alignments to all cow chromosomes.