Cow genome map
| Conread name: | rfty538b_l16.y1 |
| Conread position: | 362-548 |
| Cow position: | chr20:8619945-8620136 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 391-546 |
| Cow position: | chr20:20203394-20203232 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 397-537 |
| Cow position: | chr20:38618009-38617863 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 399-546 |
| Cow position: | chr20:38090079-38089927 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 403-542 |
| Cow position: | chr20:20158298-20158154 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 403-548 |
| Cow position: | chr20:5998503-5998659 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 403-548 |
| Cow position: | chr20:18320632-18320778 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 64, 129 |
| Conread position: | 404-543 |
| Cow position: | chr20:12420458-12420601 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 404-546 |
| Cow position: | chr20:5078788-5078641 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 404-550 |
| Cow position: | chr20:7438690-7438841 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 405-546 |
| Cow position: | chr20:28982860-28982716 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 405-548 |
| Cow position: | chr20:24069965-24069817 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 406-541 |
| Cow position: | chr20:7738072-7738212 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 406-543 |
| Cow position: | chr20:12239524-12239664 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 406-544 |
| Cow position: | chr20:3148843-3148700 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 406-544 |
| Cow position: | chr20:4786859-4786994 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 80, 53 |
| Conread position: | 406-545 |
| Cow position: | chr20:3255196-3255052 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 33, 113 |
| Conread position: | 406-546 |
| Cow position: | chr20:398148-398292 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 406-546 |
| Cow position: | chr20:9412647-9412502 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 406-546 |
| Cow position: | chr20:15530019-15529875 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 406-546 |
| Cow position: | chr20:19060680-19060823 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 406-547 |
| Cow position: | chr20:7426038-7426185 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 406-547 |
| Cow position: | chr20:38514937-38514792 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 61, 36 |
| Conread position: | 407-546 |
| Cow position: | chr20:7756467-7756608 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 407-546 |
| Cow position: | chr20:12581796-12581940 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 407-546 |
| Cow position: | chr20:18379536-18379393 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 407-549 |
| Cow position: | chr20:11751810-11751664 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 44 |
| Conread position: | 407-560 |
| Cow position: | chr20:24097159-24097000 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 408-543 |
| Cow position: | chr20:38768305-38768443 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 408-546 |
| Cow position: | chr20:11550523-11550384 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 134 |
| Conread position: | 409-536 |
| Cow position: | chr20:39155569-39155439 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 409-540 |
| Cow position: | chr20:3564312-3564180 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 409-545 |
| Cow position: | chr20:42166627-42166764 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 31 |
| Conread position: | 409-546 |
| Cow position: | chr20:8547222-8547082 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 65 |
| Conread position: | 409-546 |
| Cow position: | chr20:13752381-13752237 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 409-546 |
| Cow position: | chr20:14807043-14806901 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 409-546 |
| Cow position: | chr20:17100518-17100377 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 409-546 |
| Cow position: | chr20:19459509-19459651 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 409-546 |
| Cow position: | chr20:22978483-22978341 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 409-547 |
| Cow position: | chr20:5702880-5702737 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 409-547 |
| Cow position: | chr20:28605365-28605223 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 409-549 |
| Cow position: | chr20:35444947-35445093 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 410-543 |
| Cow position: | chr20:21815716-21815578 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 410-546 |
| Cow position: | chr20:8912343-8912485 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 411-545 |
| Cow position: | chr20:8817337-8817476 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 414-546 |
| Cow position: | chr20:8578400-8578263 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 415-541 |
| Cow position: | chr20:25161975-25162106 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 127 |
| Conread position: | 415-546 |
| Cow position: | chr20:32463374-32463506 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 50, 73 |
| Conread position: | 417-546 |
| Cow position: | chr20:8308164-8308034 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 44, 14 |
| Conread position: | 417-546 |
| Cow position: | chr20:26077520-26077654 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.