Cow genome map
Conread name: | rfty538b_l16.y1 |
Conread position: | 371-548 |
Cow position: | chr21:30592092-30592271 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 130 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 14, 117 |
Conread position: | 392-544 |
Cow position: | chr21:34654267-34654111 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 116 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 75, 120 |
Conread position: | 392-546 |
Cow position: | chr21:31090242-31090391 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 65, 5 |
Conread position: | 392-546 |
Cow position: | chr21:46451759-46451917 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 125 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 7, 130 |
Conread position: | 399-544 |
Cow position: | chr21:13365529-13365380 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 400-546 |
Cow position: | chr21:38692382-38692234 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 67, 37 |
Conread position: | 401-546 |
Cow position: | chr21:18828118-18828267 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 27, 17 |
Conread position: | 401-546 |
Cow position: | chr21:27229610-27229756 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 114 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 66, 37 |
Conread position: | 401-548 |
Cow position: | chr21:16570084-16569935 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 66, 29 |
Conread position: | 402-545 |
Cow position: | chr21:37299646-37299496 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 118 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 402-548 |
Cow position: | chr21:9027499-9027346 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 118 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 65, 28 |
Conread position: | 404-545 |
Cow position: | chr21:31691664-31691521 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 63, 88 |
Conread position: | 404-546 |
Cow position: | chr21:17252796-17252943 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 118 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 404-546 |
Cow position: | chr21:32297337-32297484 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 122 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 404-546 |
Cow position: | chr21:45262628-45262775 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 116 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 405-544 |
Cow position: | chr21:33982629-33982770 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 105 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 405-546 |
Cow position: | chr21:36297674-36297528 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 114 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 405-548 |
Cow position: | chr21:11644785-11644934 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 119 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 406-541 |
Cow position: | chr21:802137-802277 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 114 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 406-541 |
Cow position: | chr21:29069146-29069287 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 109 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 406-543 |
Cow position: | chr21:641767-641625 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 111 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-543 |
Cow position: | chr21:30222525-30222383 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 107 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-543 |
Cow position: | chr21:39393929-39393786 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 113 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 406-544 |
Cow position: | chr21:24858495-24858351 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 111 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-544 |
Cow position: | chr21:28191212-28191071 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 105 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-545 |
Cow position: | chr21:8625353-8625214 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 78, 59 |
Conread position: | 406-545 |
Cow position: | chr21:36682505-36682361 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 116 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 406-546 |
Cow position: | chr21:9990690-9990546 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 61, 126 |
Conread position: | 406-546 |
Cow position: | chr21:11057701-11057843 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 114 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 61, 83 |
Conread position: | 406-546 |
Cow position: | chr21:11739940-11740084 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 113 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 406-546 |
Cow position: | chr21:16498696-16498554 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 113 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 61, 86 |
Conread position: | 406-546 |
Cow position: | chr21:19359996-19360141 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 406-546 |
Cow position: | chr21:24598837-24598693 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 114 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 61, 15 |
Conread position: | 406-546 |
Cow position: | chr21:29485158-29485017 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 110 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 55, 75 |
Conread position: | 406-547 |
Cow position: | chr21:28030468-28030323 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 406-547 |
Cow position: | chr21:30980398-30980543 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 115 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 407-546 |
Cow position: | chr21:20163887-20163743 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 113 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 409-543 |
Cow position: | chr21:7394112-7394248 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 105 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 58, 83 |
Conread position: | 409-545 |
Cow position: | chr21:5341917-5342058 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 409-545 |
Cow position: | chr21:30250028-30250165 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 58, 12 |
Conread position: | 409-545 |
Cow position: | chr21:32559188-32559329 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 109 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 409-546 |
Cow position: | chr21:41046983-41046842 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 110 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 58, 89 |
Conread position: | 409-548 |
Cow position: | chr21:47464942-47465085 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 409-548 |
Cow position: | chr21:47719126-47719266 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 77, 12 |
Conread position: | 411-544 |
Cow position: | chr21:742452-742324 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 50, 75 |
Conread position: | 415-546 |
Cow position: | chr21:38121272-38121136 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 416-546 |
Cow position: | chr21:6851342-6851207 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 417-540 |
Cow position: | chr21:31147766-31147893 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 104 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 50, 109 |
Conread position: | 417-541 |
Cow position: | chr21:20260150-20260279 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 104 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 417-546 |
Cow position: | chr21:44214295-44214162 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 103 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 418-545 |
Cow position: | chr21:12801579-12801713 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 104 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 418-546 |
Cow position: | chr21:724711-724849 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 32, 0 |
Show alignments to all cow chromosomes.