Cow genome map

Conread name: rfty538b_l16.y1

Conread position: 392-558
Cow position: chr25:20461229-20461064 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 5

Conread position: 396-546
Cow position: chr25:14809397-14809242 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 402-546
Cow position: chr25:10949463-10949610 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 402-549
Cow position: chr25:30279090-30279242 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 403-522
Cow position: chr25:23998807-23998931 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 403-544
Cow position: chr25:22341642-22341498 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 403-547
Cow position: chr25:9107407-9107556 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 404-543
Cow position: chr25:13823604-13823747 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 38

Conread position: 404-548
Cow position: chr25:12116883-12117033 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 404-548
Cow position: chr25:19129969-19129822 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 26

Conread position: 405-540
Cow position: chr25:26238977-26238833 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 405-541
Cow position: chr25:11661702-11661844 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 405-542
Cow position: chr25:25051262-25051405 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 405-544
Cow position: chr25:33557381-33557247 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 79, 46

Conread position: 405-546
Cow position: chr25:6682947-6683093 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 405-548
Cow position: chr25:9843291-9843142 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 405-549
Cow position: chr25:33550628-33550475 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 406-528
Cow position: chr25:9574020-9574143 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 406-532
Cow position: chr25:30624969-30625100 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 406-542
Cow position: chr25:6133977-6134117 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 70

Conread position: 406-543
Cow position: chr25:41150849-41150992 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 132

Conread position: 406-544
Cow position: chr25:4521727-4521866 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 61, 75

Conread position: 406-545
Cow position: chr25:4157132-4157267 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 61, 82

Conread position: 406-546
Cow position: chr25:6961039-6961184 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 406-546
Cow position: chr25:15463701-15463556 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 406-546
Cow position: chr25:22179030-22178886 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 56, 74

Conread position: 406-546
Cow position: chr25:22531395-22531252 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 406-546
Cow position: chr25:33457846-33457701 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 406-547
Cow position: chr25:28597496-28597644 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 406-551
Cow position: chr25:14157740-14157586 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 406-560
Cow position: chr25:5637271-5637431 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 407-543
Cow position: chr25:3992892-3992757 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 57, 83

Conread position: 407-546
Cow position: chr25:13223013-13222869 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 408-546
Cow position: chr25:36872470-36872327 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 408-549
Cow position: chr25:24573177-24573034 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 84

Conread position: 408-549
Cow position: chr25:35762699-35762556 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 105

Conread position: 409-539
Cow position: chr25:15254237-15254372 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 409-542
Cow position: chr25:23829019-23829155 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 58, 18

Conread position: 409-544
Cow position: chr25:18288658-18288797 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 409-544
Cow position: chr25:26679337-26679197 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 118
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 409-546
Cow position: chr25:7379036-7379178 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 409-546
Cow position: chr25:20023275-20023417 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 409-547
Cow position: chr25:13272680-13272537 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 409-547
Cow position: chr25:23244891-23245034 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 409-572
Cow position: chr25:9989999-9990169 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 410-525
Cow position: chr25:20203023-20202903 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 410-545
Cow position: chr25:19363949-19364089 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 410-546
Cow position: chr25:19679464-19679324 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 16

Conread position: 410-548
Cow position: chr25:31065292-31065159 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 135, 7

Conread position: 410-548
Cow position: chr25:40931383-40931243 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 78

Conread position: 410-549
Cow position: chr25:23505162-23505018 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 411-544
Cow position: chr25:6227144-6227007 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 128

Conread position: 412-544
Cow position: chr25:4245778-4245648 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 74, 42

Conread position: 413-545
Cow position: chr25:12609447-12609313 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 51, 79

Conread position: 414-545
Cow position: chr25:14720850-14720714 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 415-535
Cow position: chr25:5889710-5889842 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 415-543
Cow position: chr25:11436702-11436835 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 415-546
Cow position: chr25:12778436-12778569 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 415-546
Cow position: chr25:17975273-17975408 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 123

Conread position: 415-546
Cow position: chr25:19478780-19478644 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 417-546
Cow position: chr25:4547615-4547749 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 418-544
Cow position: chr25:36036677-36036808 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 428-547
Cow position: chr25:14211721-14211598 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 116

Show alignments to all cow chromosomes.