Cow genome map
Conread name: | rfty538b_l16.y1 |
Conread position: | 392-558 |
Cow position: | chr25:20461229-20461064 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 124 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 75, 5 |
Conread position: | 396-546 |
Cow position: | chr25:14809397-14809242 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 118 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 402-546 |
Cow position: | chr25:10949463-10949610 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 112 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 402-549 |
Cow position: | chr25:30279090-30279242 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 122 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 403-522 |
Cow position: | chr25:23998807-23998931 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 100 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 403-544 |
Cow position: | chr25:22341642-22341498 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 113 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 403-547 |
Cow position: | chr25:9107407-9107556 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 111 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 404-543 |
Cow position: | chr25:13823604-13823747 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 114 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 63, 38 |
Conread position: | 404-548 |
Cow position: | chr25:12116883-12117033 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 112 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 404-548 |
Cow position: | chr25:19129969-19129822 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 116 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 63, 26 |
Conread position: | 405-540 |
Cow position: | chr25:26238977-26238833 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 113 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 405-541 |
Cow position: | chr25:11661702-11661844 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 405-542 |
Cow position: | chr25:25051262-25051405 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 118 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 405-544 |
Cow position: | chr25:33557381-33557247 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 110 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 79, 46 |
Conread position: | 405-546 |
Cow position: | chr25:6682947-6683093 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 113 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 405-548 |
Cow position: | chr25:9843291-9843142 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 405-549 |
Cow position: | chr25:33550628-33550475 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 119 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 406-528 |
Cow position: | chr25:9574020-9574143 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 99 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-532 |
Cow position: | chr25:30624969-30625100 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 103 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 406-542 |
Cow position: | chr25:6133977-6134117 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 112 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 61, 70 |
Conread position: | 406-543 |
Cow position: | chr25:41150849-41150992 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 115 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 22, 132 |
Conread position: | 406-544 |
Cow position: | chr25:4521727-4521866 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 61, 75 |
Conread position: | 406-545 |
Cow position: | chr25:4157132-4157267 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 109 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 61, 82 |
Conread position: | 406-546 |
Cow position: | chr25:6961039-6961184 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 108 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 406-546 |
Cow position: | chr25:15463701-15463556 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 406-546 |
Cow position: | chr25:22179030-22178886 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 56, 74 |
Conread position: | 406-546 |
Cow position: | chr25:22531395-22531252 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-546 |
Cow position: | chr25:33457846-33457701 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 406-547 |
Cow position: | chr25:28597496-28597644 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 115 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-551 |
Cow position: | chr25:14157740-14157586 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 120 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 406-560 |
Cow position: | chr25:5637271-5637431 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 407-543 |
Cow position: | chr25:3992892-3992757 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 108 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 57, 83 |
Conread position: | 407-546 |
Cow position: | chr25:13223013-13222869 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 116 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 408-546 |
Cow position: | chr25:36872470-36872327 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 408-549 |
Cow position: | chr25:24573177-24573034 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 112 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 59, 84 |
Conread position: | 408-549 |
Cow position: | chr25:35762699-35762556 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 120 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 54, 105 |
Conread position: | 409-539 |
Cow position: | chr25:15254237-15254372 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 108 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 409-542 |
Cow position: | chr25:23829019-23829155 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 58, 18 |
Conread position: | 409-544 |
Cow position: | chr25:18288658-18288797 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 110 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 409-544 |
Cow position: | chr25:26679337-26679197 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 118 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 409-546 |
Cow position: | chr25:7379036-7379178 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 409-546 |
Cow position: | chr25:20023275-20023417 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 409-547 |
Cow position: | chr25:13272680-13272537 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 409-547 |
Cow position: | chr25:23244891-23245034 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 409-572 |
Cow position: | chr25:9989999-9990169 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 132 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 410-525 |
Cow position: | chr25:20203023-20202903 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 98 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 410-545 |
Cow position: | chr25:19363949-19364089 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 109 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 410-546 |
Cow position: | chr25:19679464-19679324 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 57, 16 |
Conread position: | 410-548 |
Cow position: | chr25:31065292-31065159 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 112 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 135, 7 |
Conread position: | 410-548 |
Cow position: | chr25:40931383-40931243 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 115 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 51, 78 |
Conread position: | 410-549 |
Cow position: | chr25:23505162-23505018 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 411-544 |
Cow position: | chr25:6227144-6227007 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 53, 128 |
Conread position: | 412-544 |
Cow position: | chr25:4245778-4245648 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 74, 42 |
Conread position: | 413-545 |
Cow position: | chr25:12609447-12609313 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 51, 79 |
Conread position: | 414-545 |
Cow position: | chr25:14720850-14720714 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 415-535 |
Cow position: | chr25:5889710-5889842 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 106 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 415-543 |
Cow position: | chr25:11436702-11436835 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 102 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 415-546 |
Cow position: | chr25:12778436-12778569 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 100 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 415-546 |
Cow position: | chr25:17975273-17975408 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 52, 123 |
Conread position: | 415-546 |
Cow position: | chr25:19478780-19478644 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 108 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 417-546 |
Cow position: | chr25:4547615-4547749 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 111 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 418-544 |
Cow position: | chr25:36036677-36036808 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 428-547 |
Cow position: | chr25:14211721-14211598 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 100 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 39, 116 |
Show alignments to all cow chromosomes.