Cow genome map

Conread name: rfty538b_l16.y1

Conread position: 377-544
Cow position: chr3:54946252-54946080 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 377-546
Cow position: chr3:32585273-32585097 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 383-544
Cow position: chr3:6182112-6182272 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 79, 108

Conread position: 399-541
Cow position: chr3:44960906-44961052 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 62, 120

Conread position: 399-546
Cow position: chr3:69650790-69650942 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 399-546
Cow position: chr3:70762024-70762172 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 133

Conread position: 400-543
Cow position: chr3:20677744-20677889 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 67, 92

Conread position: 400-549
Cow position: chr3:41652474-41652319 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 401-546
Cow position: chr3:15506545-15506395 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 66, 77

Conread position: 404-538
Cow position: chr3:50593821-50593957 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 404-545
Cow position: chr3:26874685-26874544 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 85

Conread position: 404-548
Cow position: chr3:2067988-2067838 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 405-541
Cow position: chr3:22716204-22716346 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 405-542
Cow position: chr3:50768772-50768630 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 405-544
Cow position: chr3:75480092-75479952 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 405-549
Cow position: chr3:3947131-3946982 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 405-549
Cow position: chr3:15173174-15173024 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 405-549
Cow position: chr3:54290418-54290569 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 406-542
Cow position: chr3:8349472-8349614 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 15

Conread position: 406-542
Cow position: chr3:55177654-55177795 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 406-543
Cow position: chr3:22165324-22165465 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 406-543
Cow position: chr3:56059903-56059761 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 406-543
Cow position: chr3:60264624-60264766 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 406-544
Cow position: chr3:4481034-4480892 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 109

Conread position: 406-544
Cow position: chr3:62789083-62789226 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 406-544
Cow position: chr3:68616238-68616374 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 86

Conread position: 406-545
Cow position: chr3:3738573-3738431 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 61, 88

Conread position: 406-545
Cow position: chr3:23408266-23408408 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 406-545
Cow position: chr3:68156815-68156670 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 406-546
Cow position: chr3:7337692-7337835 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 406-546
Cow position: chr3:16752167-16752311 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 406-546
Cow position: chr3:52608274-52608129 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 406-546
Cow position: chr3:55835728-55835874 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 406-546
Cow position: chr3:55984190-55984046 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 406-546
Cow position: chr3:60265162-60265304 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 406-546
Cow position: chr3:68004610-68004755 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 406-546
Cow position: chr3:73461058-73460914 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 406-546
Cow position: chr3:75080852-75080710 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 80, 20

Conread position: 406-546
Cow position: chr3:82629407-82629263 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 20

Conread position: 406-547
Cow position: chr3:10958148-10958294 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 406-547
Cow position: chr3:26218961-26219105 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 19

Conread position: 406-547
Cow position: chr3:39969770-39969917 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 406-547
Cow position: chr3:73443004-73443143 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 406-548
Cow position: chr3:3478163-3478310 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 406-548
Cow position: chr3:71474313-71474459 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 12

Conread position: 406-548
Cow position: chr3:81371741-81371592 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 406-549
Cow position: chr3:55271953-55272101 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 406-558
Cow position: chr3:52845648-52845489 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 130

Conread position: 406-586
Cow position: chr3:59920119-59919935 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 82

Conread position: 407-543
Cow position: chr3:23105271-23105412 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 407-545
Cow position: chr3:8061217-8061077 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 407-546
Cow position: chr3:19585954-19585811 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 407-547
Cow position: chr3:49363200-49363055 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 407-547
Cow position: chr3:64196917-64196772 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 407-547
Cow position: chr3:74754416-74754272 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 60, 117

Conread position: 407-549
Cow position: chr3:79196850-79196703 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 408-543
Cow position: chr3:15950823-15950963 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 408-543
Cow position: chr3:32409302-32409162 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 408-543
Cow position: chr3:80072219-80072079 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 408-546
Cow position: chr3:59604933-59604793 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 408-546
Cow position: chr3:74601204-74601061 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 408-550
Cow position: chr3:55189663-55189812 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 409-536
Cow position: chr3:17447526-17447655 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 409-542
Cow position: chr3:59610629-59610767 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 409-543
Cow position: chr3:23168977-23169113 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 105

Conread position: 409-543
Cow position: chr3:38864215-38864075 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 409-543
Cow position: chr3:51349912-51349773 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 409-543
Cow position: chr3:80565055-80564917 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 123

Conread position: 409-544
Cow position: chr3:3316728-3316866 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 64, 9

Conread position: 409-547
Cow position: chr3:76156076-76155934 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 58, 107

Conread position: 409-549
Cow position: chr3:19682786-19682639 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 410-540
Cow position: chr3:38100231-38100094 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 410-546
Cow position: chr3:10347443-10347301 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 410-546
Cow position: chr3:47753314-47753173 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 410-548
Cow position: chr3:10668791-10668934 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 410-548
Cow position: chr3:54506795-54506652 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 410-554
Cow position: chr3:9120930-9120784 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 82

Conread position: 411-564
Cow position: chr3:23132082-23132242 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 414-549
Cow position: chr3:54981995-54982136 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 415-542
Cow position: chr3:16505396-16505524 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 69

Conread position: 415-545
Cow position: chr3:17936755-17936891 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 416-545
Cow position: chr3:20334089-20333955 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 114
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 416-547
Cow position: chr3:74533431-74533295 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 417-544
Cow position: chr3:55109532-55109664 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 417-546
Cow position: chr3:75608579-75608447 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 89

Conread position: 418-545
Cow position: chr3:71703555-71703426 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 418-546
Cow position: chr3:31350024-31350157 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 419-546
Cow position: chr3:63177562-63177430 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 420-545
Cow position: chr3:45534218-45534345 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 117

Conread position: 421-547
Cow position: chr3:58968826-58968957 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 429-546
Cow position: chr3:70614418-70614537 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Show alignments to all cow chromosomes.