Cow genome map
Conread name: | rfty538b_l16.y1 |
Conread position: | 397-546 |
Cow position: | chr5:43403054-43402902 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 116 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 64, 29 |
Conread position: | 397-546 |
Cow position: | chr5:64321898-64321751 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 118 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 70, 18 |
Conread position: | 397-547 |
Cow position: | chr5:50821934-50821780 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 117 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 64, 138 |
Conread position: | 399-545 |
Cow position: | chr5:56517253-56517102 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 115 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 68, 101 |
Conread position: | 400-544 |
Cow position: | chr5:20422045-20422190 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 61, 92 |
Conread position: | 400-546 |
Cow position: | chr5:41545745-41545896 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 400-546 |
Cow position: | chr5:57686589-57686740 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 402-545 |
Cow position: | chr5:68719013-68718868 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 109 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 404-545 |
Cow position: | chr5:24996079-24996225 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 121 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 404-545 |
Cow position: | chr5:59626828-59626973 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 116 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 63, 33 |
Conread position: | 404-546 |
Cow position: | chr5:20288118-20288266 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 115 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 404-546 |
Cow position: | chr5:35685079-35684935 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 404-546 |
Cow position: | chr5:35982593-35982741 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 115 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 404-546 |
Cow position: | chr5:60599061-60599208 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 119 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 12, 31 |
Conread position: | 404-549 |
Cow position: | chr5:17554889-17555038 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 58, 38 |
Conread position: | 404-551 |
Cow position: | chr5:51298569-51298721 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 127 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 63, 90 |
Conread position: | 405-543 |
Cow position: | chr5:65753003-65752860 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 112 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 11, 22 |
Conread position: | 405-545 |
Cow position: | chr5:14314671-14314526 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 405-545 |
Cow position: | chr5:70271010-70270864 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 115 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 405-546 |
Cow position: | chr5:72006347-72006493 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 115 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 406-517 |
Cow position: | chr5:34288110-34288224 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 93 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 406-539 |
Cow position: | chr5:22795356-22795221 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-541 |
Cow position: | chr5:38833263-38833125 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 104 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 406-542 |
Cow position: | chr5:44446723-44446865 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-543 |
Cow position: | chr5:4166782-4166642 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 112 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 63, 42 |
Conread position: | 406-543 |
Cow position: | chr5:40109634-40109493 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 111 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 59, 69 |
Conread position: | 406-544 |
Cow position: | chr5:9233846-9233990 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 111 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 406-544 |
Cow position: | chr5:25035116-25035255 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 110 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 55, 86 |
Conread position: | 406-544 |
Cow position: | chr5:45397711-45397572 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 112 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 55, 85 |
Conread position: | 406-544 |
Cow position: | chr5:56338879-56339022 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 112 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-544 |
Cow position: | chr5:62378922-62378780 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 110 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 61, 86 |
Conread position: | 406-545 |
Cow position: | chr5:9170442-9170583 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 111 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 75, 15 |
Conread position: | 406-545 |
Cow position: | chr5:17104992-17104851 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 61, 86 |
Conread position: | 406-545 |
Cow position: | chr5:34914911-34915055 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 406-545 |
Cow position: | chr5:45126794-45126649 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 112 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 406-545 |
Cow position: | chr5:67118562-67118418 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-546 |
Cow position: | chr5:12322663-12322807 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 115 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 21, 88 |
Conread position: | 406-546 |
Cow position: | chr5:41165230-41165085 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 112 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-546 |
Cow position: | chr5:43929594-43929738 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-546 |
Cow position: | chr5:44028167-44028306 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 112 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 66, 19 |
Conread position: | 406-546 |
Cow position: | chr5:46512627-46512771 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-546 |
Cow position: | chr5:49341907-49342052 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-546 |
Cow position: | chr5:55232671-55232814 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 107 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 406-546 |
Cow position: | chr5:64139702-64139557 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-547 |
Cow position: | chr5:5110927-5111078 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 119 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 52, 94 |
Conread position: | 406-549 |
Cow position: | chr5:69731642-69731500 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 61, 110 |
Conread position: | 407-541 |
Cow position: | chr5:21617599-21617460 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 108 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 407-542 |
Cow position: | chr5:14920789-14920928 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 115 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 60, 125 |
Conread position: | 407-543 |
Cow position: | chr5:42050692-42050553 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 110 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 55, 14 |
Conread position: | 407-543 |
Cow position: | chr5:66257777-66257639 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 106 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 60, 85 |
Conread position: | 407-544 |
Cow position: | chr5:26548999-26549141 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 110 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 407-545 |
Cow position: | chr5:9893982-9894125 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 407-546 |
Cow position: | chr5:50824733-50824589 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 112 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 407-546 |
Cow position: | chr5:56014872-56014728 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 111 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 407-546 |
Cow position: | chr5:69383395-69383252 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 60, 19 |
Conread position: | 407-546 |
Cow position: | chr5:70951748-70951883 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 111 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 89, 60 |
Conread position: | 407-547 |
Cow position: | chr5:17086880-17087024 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 60, 67 |
Conread position: | 408-542 |
Cow position: | chr5:4710012-4710150 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 106 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 408-546 |
Cow position: | chr5:63150029-63150171 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 408-549 |
Cow position: | chr5:46540916-46541061 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 122 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 409-543 |
Cow position: | chr5:35826740-35826602 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 108 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 61, 12 |
Conread position: | 409-544 |
Cow position: | chr5:7193555-7193418 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 58, 24 |
Conread position: | 409-544 |
Cow position: | chr5:60523871-60523732 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 109 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 58, 83 |
Conread position: | 409-545 |
Cow position: | chr5:21829006-21828866 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 113 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 409-545 |
Cow position: | chr5:34562156-34562014 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 118 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 58, 96 |
Conread position: | 409-546 |
Cow position: | chr5:30276829-30276687 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 409-546 |
Cow position: | chr5:30629018-30629162 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 116 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 58, 22 |
Conread position: | 409-546 |
Cow position: | chr5:60016304-60016165 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 115 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 409-546 |
Cow position: | chr5:64026880-64027022 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 112 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 410-532 |
Cow position: | chr5:38169033-38168905 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 104 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 410-535 |
Cow position: | chr5:65136402-65136275 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 10, 74 |
Conread position: | 410-546 |
Cow position: | chr5:6045434-6045291 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 113 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 410-546 |
Cow position: | chr5:56028403-56028542 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 109 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 412-546 |
Cow position: | chr5:56334376-56334511 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 107 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 60, 25 |
Conread position: | 412-547 |
Cow position: | chr5:67244054-67243917 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 105 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 53, 80 |
Conread position: | 414-545 |
Cow position: | chr5:57626922-57626794 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 107 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 109, 72 |
Conread position: | 414-546 |
Cow position: | chr5:53835850-53835711 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 111 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 415-546 |
Cow position: | chr5:6286300-6286436 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 52, 75 |
Conread position: | 415-546 |
Cow position: | chr5:29903390-29903526 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 104 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 415-546 |
Cow position: | chr5:30303024-30302893 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 107 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 52, 94 |
Conread position: | 415-546 |
Cow position: | chr5:57074198-57074334 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 415-546 |
Cow position: | chr5:61102849-61102712 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 52, 101 |
Conread position: | 415-548 |
Cow position: | chr5:45804193-45804054 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 113 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 13, 32 |
Conread position: | 415-549 |
Cow position: | chr5:63992039-63992178 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 110 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 417-544 |
Cow position: | chr5:41403443-41403573 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 100 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 419-546 |
Cow position: | chr5:24069519-24069387 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 103 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.