Cow genome map

Conread name: rfty538b_l16.y1

Conread position: 347-544
Cow position: chr8:28313536-28313737 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 120, 185

Conread position: 383-550
Cow position: chr8:4796906-4796745 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 79, 34

Conread position: 387-548
Cow position: chr8:8577974-8577810 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 75, 29

Conread position: 394-538
Cow position: chr8:15182487-15182338 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 394-546
Cow position: chr8:46743177-46743330 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 73, 92

Conread position: 400-549
Cow position: chr8:32854690-32854844 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 128
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 67, 0

Conread position: 401-546
Cow position: chr8:6484798-6484949 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 401-546
Cow position: chr8:20320621-20320471 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 402-547
Cow position: chr8:33974688-33974540 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 84, 0

Conread position: 403-546
Cow position: chr8:4924697-4924550 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 58, 0

Conread position: 403-547
Cow position: chr8:9655701-9655557 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 403-548
Cow position: chr8:6076424-6076572 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 114

Conread position: 404-544
Cow position: chr8:24980828-24980684 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 137

Conread position: 404-546
Cow position: chr8:5467961-5468109 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 404-546
Cow position: chr8:18728915-18728770 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 119

Conread position: 404-546
Cow position: chr8:39807728-39807581 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 404-546
Cow position: chr8:55070846-55070699 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 404-548
Cow position: chr8:32133398-32133248 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 405-542
Cow position: chr8:24867613-24867756 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 405-544
Cow position: chr8:57406889-57406745 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 405-545
Cow position: chr8:1304034-1303891 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 87

Conread position: 405-545
Cow position: chr8:13661154-13661001 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 405-546
Cow position: chr8:26284726-26284873 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 405-546
Cow position: chr8:38894140-38893994 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 405-550
Cow position: chr8:34060034-34060184 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 125
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 62, 0

Conread position: 406-519
Cow position: chr8:8714921-8714803 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 406-536
Cow position: chr8:48555532-48555664 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 78, 15

Conread position: 406-537
Cow position: chr8:33432386-33432250 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 406-540
Cow position: chr8:32094000-32093864 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 406-540
Cow position: chr8:42762304-42762443 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 406-543
Cow position: chr8:35580508-35580650 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 406-543
Cow position: chr8:47170070-47169929 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 15

Conread position: 406-544
Cow position: chr8:6224311-6224450 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 28

Conread position: 406-544
Cow position: chr8:19716984-19717115 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 406-544
Cow position: chr8:24905592-24905449 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 406-544
Cow position: chr8:43153563-43153706 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 406-544
Cow position: chr8:61294053-61293913 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 22

Conread position: 406-545
Cow position: chr8:17167697-17167553 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 406-545
Cow position: chr8:55247466-55247607 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 20

Conread position: 406-546
Cow position: chr8:4648759-4648904 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 406-546
Cow position: chr8:10082029-10081887 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 86

Conread position: 406-546
Cow position: chr8:10456593-10456449 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 12

Conread position: 406-546
Cow position: chr8:32198014-32198158 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 88

Conread position: 406-546
Cow position: chr8:32278222-32278365 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 125

Conread position: 406-546
Cow position: chr8:35971976-35971832 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 406-546
Cow position: chr8:39174115-39174261 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 406-546
Cow position: chr8:40280809-40280669 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 86

Conread position: 406-546
Cow position: chr8:41219455-41219310 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 89

Conread position: 406-546
Cow position: chr8:42794195-42794340 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 406-546
Cow position: chr8:44557913-44558057 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 406-546
Cow position: chr8:45126108-45126253 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 406-546
Cow position: chr8:54062025-54061880 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 406-546
Cow position: chr8:55716879-55716737 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 406-546
Cow position: chr8:58058870-58058725 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 406-546
Cow position: chr8:58393689-58393544 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 406-546
Cow position: chr8:61157103-61157248 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 406-547
Cow position: chr8:10336911-10337057 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 406-547
Cow position: chr8:38572142-38572285 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 406-547
Cow position: chr8:59766722-59766580 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 110

Conread position: 406-548
Cow position: chr8:3887459-3887311 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 123
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 406-548
Cow position: chr8:6951652-6951506 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 61, 26

Conread position: 406-548
Cow position: chr8:26651417-26651269 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 22, 0

Conread position: 406-549
Cow position: chr8:8189932-8190085 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 407-540
Cow position: chr8:33640492-33640353 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 407-543
Cow position: chr8:60339793-60339934 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 407-546
Cow position: chr8:12799046-12798901 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 407-546
Cow position: chr8:29624843-29624986 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 60, 98

Conread position: 407-546
Cow position: chr8:52229564-52229709 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 407-548
Cow position: chr8:24202043-24201898 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 60, 40

Conread position: 407-549
Cow position: chr8:948658-948517 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 60, 98

Conread position: 408-542
Cow position: chr8:834542-834405 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 85

Conread position: 408-542
Cow position: chr8:23179420-23179555 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 78

Conread position: 408-544
Cow position: chr8:5437890-5437749 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 408-544
Cow position: chr8:24371592-24371730 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 72, 12

Conread position: 408-546
Cow position: chr8:28229349-28229492 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 119
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 409-545
Cow position: chr8:15569359-15569500 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 409-545
Cow position: chr8:28987823-28987682 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 409-546
Cow position: chr8:33406722-33406865 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 409-546
Cow position: chr8:37635870-37636012 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 409-546
Cow position: chr8:37672159-37672017 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 409-546
Cow position: chr8:46082292-46082151 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 409-547
Cow position: chr8:25349836-25349693 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 409-549
Cow position: chr8:59250853-59250707 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 410-544
Cow position: chr8:16957743-16957606 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 11

Conread position: 410-544
Cow position: chr8:20910954-20911093 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 410-545
Cow position: chr8:1843010-1843150 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 410-545
Cow position: chr8:20657239-20657379 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 410-545
Cow position: chr8:54052431-54052291 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 410-546
Cow position: chr8:18207019-18207154 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 6, 81

Conread position: 410-547
Cow position: chr8:55089726-55089869 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 411-544
Cow position: chr8:40633747-40633883 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 15

Conread position: 411-546
Cow position: chr8:6248755-6248893 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 411-548
Cow position: chr8:33994365-33994222 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 125

Conread position: 412-546
Cow position: chr8:39630893-39630757 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 80

Conread position: 414-545
Cow position: chr8:18170897-18171033 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 415-547
Cow position: chr8:983850-983713 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 46, 0

Conread position: 415-547
Cow position: chr8:6531533-6531394 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 417-544
Cow position: chr8:16031463-16031595 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 422-540
Cow position: chr8:3914702-3914579 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 426-543
Cow position: chr8:554078-554200 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 428-542
Cow position: chr8:16938363-16938482 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 0

Show alignments to all cow chromosomes.