Cow genome map


           Conread name:
           rfty538b_l16.y1
        

               Conread position:
               347-544
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               120, 185
               

               Conread position:
               383-550
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               79, 34
               

               Conread position:
               387-548
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               75, 29
               

               Conread position:
               394-538
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               394-546
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               73, 92
               

               Conread position:
               400-549
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               401-546
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               401-546
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               402-547
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               403-546
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               403-547
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-548
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               83, 114
               

               Conread position:
               404-544
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 137
               

               Conread position:
               404-546
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               404-546
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 119
               

               Conread position:
               404-546
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               404-546
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               404-548
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               405-542
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               405-544
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               405-545
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               62, 87
               

               Conread position:
               405-545
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               405-546
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               405-546
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               405-550
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               406-519
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-536
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               78, 15
               

               Conread position:
               406-537
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               406-540
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-540
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               406-543
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-543
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               61, 15
               

               Conread position:
               406-544
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 28
               

               Conread position:
               406-544
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               406-544
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               406-544
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-544
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 22
               

               Conread position:
               406-545
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-545
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               55, 20
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               61, 86
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 12
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               61, 88
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 125
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 86
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               55, 89
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               406-547
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-547
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-547
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 110
               

               Conread position:
               406-548
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-548
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               61, 26
               

               Conread position:
               406-548
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               406-549
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               407-540
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               407-543
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               407-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               407-546
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               60, 98
               

               Conread position:
               407-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               407-548
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               60, 40
               

               Conread position:
               407-549
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               60, 98
               

               Conread position:
               408-542
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               74, 85
               

               Conread position:
               408-542
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 78
               

               Conread position:
               408-544
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               408-544
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               408-546
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               409-545
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               409-545
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               409-546
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               409-546
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               409-546
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               409-546
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               409-547
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               409-549
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               410-544
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               57, 11
               

               Conread position:
               410-544
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               410-545
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               410-545
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               410-545
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               410-546
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               6, 81
               

               Conread position:
               410-547
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               411-544
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               411-546
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               411-548
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 125
               

               Conread position:
               412-546
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 80
               

               Conread position:
               414-545
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               415-547
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               415-547
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               417-544
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               422-540
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               426-543
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               428-542
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               39, 0
               
Show alignments to all cow chromosomes.